Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10005 cluster # 10005       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10005#0 length = 1258 sequences # 4  
consensus_10005#1 length = 1097 sequences # 2  
consensus_10005#2 length = 439 sequences # 1  

consensusID : consensus_10005#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1258
fasta sequence
                              [CGCGAGAGGAGAAGCGAAGAGGCGACGGCATGCGGCTGGCGACGCGAGAGGCGACGGCGACGACGACCCGCTTCCCATCCGACGTCCACGCTCTCCGCCGCCTTCTCGCCAGTAACGCATCACCGTCGTCTTCCTTGTTCCTTTCTCTCCCCGGCGCTAGGGTTGTTGCTTGCTAGGGTTCTTGGCCACCGCCTCCTCCCCTGCCGCTGTAGCACGCCACCGCCGCCTCCTTGGTTTTTGCTTGCTAGGGTTCTTGTGCTGCTGCTGCTCTTCTTCCGCCCAAATGAGGGCTTTCCAAGGGCTGGTGTTTGTTGGGGATTCCGATCCGCGTAGGGGGTGGGGATGGGGGAATCGTGATGGGTTCTTGGAGATTTGGTCTGTGGTTTAGGTTCTTGCAGTGTTGCGGGGGATTCTTGGTGGAAGAGCCCTAGGTTCTTGGTTCTGTTTCTTGCCCTAGATCTTGGCTGAAGGATCGATGTGTTGCATAGCCATGGATCTGTCAACCAGCTTCCCTTTCAGTTTGTCTTCTTCTCGAATGAACCAGGAAATTATGCTGAAAAAAAAACATGTCACTGTAACTGGACTGGTGCTCCATCTCTGTTTTTGTACTCACCCAAGCCAGGCTAAGTCAAGATTGTTATTAAATTCAGTGTTGCATAAGAAAAGATCCTTTGATAACCAGTTTTTGTCAGTTCTTGATGGCATTTCTGTTCATTATTCAGATTTTGATAACCACATGTCCTCATGGATTAGCTGCTTTTTAGCTTGGATACTTAATTTTAGCCAGCACTGGCTGCCTCAACAAACTACTATGCTAATTATAAACCTTTTCTATTTCCATCTTTCTGTTTATGATTCATTAAATCTTAGCCATTTTCCATCAGATGCTTTGGTCCCTTCTCCCTTTCTCTGCATATATCATTGTAGATTGTCCTTGTTCCGATGGGGCCATCCTCTTTCTCTGAGGATCATCATGCATGACAATTTGCACCTCATAACCAGAATTTGCAGGAAGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGAAACTGCAATCCTGCTAGTGATCCATTAACAAACCAGCCCCTGTTATCAGCAAACATCATTAACAAGCATATTTTTCTGCTTTATTTGGAGAAGAAAGCTTTGCGCATCGATGCTGAAATATAAATTGAACTGCAGTAGGAAGATGATTTTGTTGCCTCTTTTTTGGCTGCCTCATTCT]

[+] EMBL AK064845             [CGCGAGAGGAGAAGCGAAGAGGCGACGGCATGCGGCTGGCGACGCGAGAGGCGACGGCGACGACGACCCGCTTCCCATCCGACGTCCACGCTCTCCGCCGCCTTCTCGCCAGTAACGCATCACCGTCGTCTTCCTTGTTCCTTTCTCTCCCCGGCGCTAGGGTTGTTGCTTGCTAGGGTTCTTGGCCACCGCCTCCTCCCCTGCCGCTGTAGCACGCCACCGCCGCCTCCTTGGTTTTTGCTTGCTAGGGTTCTTGTGCTGCTGCTGCTCTTCTTCCGCCCAAATGAGGGCTTTCCAAGGGCTGGTGTTTGTTGGGGATTCCGATCCGCGTAGGGGGTGGGGATGGGGGAATCGTGATGGGTTCTTGGAGATTTGGTCTGTGGTTTAGGTTCTTGCAGTGTTGCGGGGGATTCTTGGTGGAAGAGCCCTAGGTTCTTGGTTCTGTTTCTTGCCCTAGATCTTGGCTGAAGGATCGATGTGTTGCATAGCCATGGATCTGTCAACCAGCTTCCCTTTCAGTTTGTCTTCTTCTCGAATGAACCAGGAAATTATGCTGAAAAAAAAACATGTCACTGTAACTGGACTGGTGCTCCATCTCTGTTTTTGTACTCACCCAAGCCAGGCTAAGTCAAGATTGTTATTAAATTCAGTGTTGCATAAGAAAAGATCCTTTGATAACCAGTTTTTGTCAGTTCTTGATGGCATTTCTGTTCATTATTCAGATTTTGATAACCACATGTCCTCATGGATTAGCTGCTTTTTAGCTTGGATACTTAATTTTAGCCAGCACTGGCTGCCTCAACAAACTACTATGCTAATTATAAACCTTTTCTATTTCCATCTTTCTGTTTATGATTCATTAAATCTTAGCCATTTTCCATCAGATGCTTTGGTCCCTTCTCCCTTTCTCTGCATATATCATTGTAGATTGTCCTTGTTCCGATGGGGCCATCCTCTTTCTCTGAGGATCATCATGCATGACAATTTGCACCTCATAACCAGAATTTGCAGGAAGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGAAACTGCAATCCTGCTAGTGATCCATTAACAAACCAGCCCCTGTTATCAGCAAACATCATTAACAAGCATATTTTTCTGCTTTATTTGGAGAAGAAAGCTTTGCGCATCGATGCTGAAATATAAATTGAACTGCAGTAGGAAGATGATTTTGTTGCCTCTTTTTTGGCTGCCTCATTCT]
[+] EMBL CB641123             [                            CATGCGGGTGGCGACGCGAGAGGCGACGGCGACGACGACCCGCTTCCCATCCGACGTCCACGCTCTCCGCCGCCTTCTCGCCAGTAACGCATCACCGTCGTCTTCCTTGTTCCTTTCTCTCCCCGGCGCTAGGGTTGTTGCTTGCTAGGGTTCTTGGCCACCGCCTCCTCCCCTGCCGCTGTAGCACGCCACCGCCGCCTCCTTGGTTTTTGCTTGCTAGGGTTCTTGTGCTGCTGCTGCTCTTCTTCCGCCCAAATGAGGGCTTTCCAAGGGCTGGTGTTTGATGGGGATTCCGATCCGCGTAGGGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB639511             [                            CATGCGGCTGGCGACGCGAGAGGCGACGGCGACGACGACCCGCTTCCCATCCGACGTCCACGCTCTCCGCCGCCTTCTCGCCAGTAACGCATCACCGTCGTCTTCCTTGTTCCTTTCTCTCCCCGGCGCTAGGGTTGTTGCTTGCTAGGGTTCTTGGCCACCGCCTCCTCCCCTGCCGCTGTAGCACGCCACCGCCGCCTCCTTGGTTTTTGCTTGCTAGGGTTCTTGTGCTGCTGCTGCTCTTCTTCCGCCCAAATGAGGGCTTTCCAAGGGCTGGTGTTTGTTGGGGATTCCGATCCGCGTAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB676737             [                                                                                                                                                                                                                                                                                                                                                                                AGATTTGGTCTGTGGTTTAGGTTCTTGCAGTGTTGCGGGGGATTCTTGGTGGAAGAGCCCTAGGTTCTTGGTTCTGCCTCTTGCCCTAGATCTTGGCTGAAGGATCGATGTGTTGCATAGCCATGGATCTGTCAACCAGCTTCCCTTTCAGTTTGTCTTCTTCTCGAATGAACCAGGAAATTATGCTGAAAAAAAAACATGTCACTGTAACTGGACTGGTGCTCCATCTCTGTTTTTGTACTCACCCAAGCCAGGCTAAGTCAAGATTGTTATTAAATTCAGTGTTGCATAAGAAAAGATCCTTTGATAACCAGTTTTTGTCTTTTCTTGATGGCATTTCTGTTCATTATTCAGATTTTGATAACCACATGTCCTCATGGATTAGCTGCTTTTTAGCTTGGATACTTAATTTTAGCCAGCACTGGCTGCCTCAACAAACTACTATGCTAATTATAAACCTTTTCTATTTCCATCTTTCTGTTTATGATTCATTAAATCTTAGCCATTTTCCATCAGATGCTTTGGTCCCTTCTCCCTTTCTCTGCATATATCATTGTAGATTGTCCTTGTTCCGATGGGGCCATCCTCTTTCTCTGAGGATCATCATGCATGACAATTTGCACCTCATAACCAGAATTTGCAGGAAGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGAAACTGNCATCCTGCTAGTGATCCATTAACAAA                                                                                                                                                  ]


>consensus_10005#0 CGCGAGAGGAGAAGCGAAGAGGCGACGGCATGCGGCTGGCGACGCGAGAGGCGACGGCGA CGACGACCCGCTTCCCATCCGACGTCCACGCTCTCCGCCGCCTTCTCGCCAGTAACGCAT CACCGTCGTCTTCCTTGTTCCTTTCTCTCCCCGGCGCTAGGGTTGTTGCTTGCTAGGGTT CTTGGCCACCGCCTCCTCCCCTGCCGCTGTAGCACGCCACCGCCGCCTCCTTGGTTTTTG CTTGCTAGGGTTCTTGTGCTGCTGCTGCTCTTCTTCCGCCCAAATGAGGGCTTTCCAAGG GCTGGTGTTTGTTGGGGATTCCGATCCGCGTAGGGGGTGGGGATGGGGGAATCGTGATGG GTTCTTGGAGATTTGGTCTGTGGTTTAGGTTCTTGCAGTGTTGCGGGGGATTCTTGGTGG AAGAGCCCTAGGTTCTTGGTTCTGTTTCTTGCCCTAGATCTTGGCTGAAGGATCGATGTG TTGCATAGCCATGGATCTGTCAACCAGCTTCCCTTTCAGTTTGTCTTCTTCTCGAATGAA CCAGGAAATTATGCTGAAAAAAAAACATGTCACTGTAACTGGACTGGTGCTCCATCTCTG TTTTTGTACTCACCCAAGCCAGGCTAAGTCAAGATTGTTATTAAATTCAGTGTTGCATAA GAAAAGATCCTTTGATAACCAGTTTTTGTCAGTTCTTGATGGCATTTCTGTTCATTATTC AGATTTTGATAACCACATGTCCTCATGGATTAGCTGCTTTTTAGCTTGGATACTTAATTT TAGCCAGCACTGGCTGCCTCAACAAACTACTATGCTAATTATAAACCTTTTCTATTTCCA TCTTTCTGTTTATGATTCATTAAATCTTAGCCATTTTCCATCAGATGCTTTGGTCCCTTC TCCCTTTCTCTGCATATATCATTGTAGATTGTCCTTGTTCCGATGGGGCCATCCTCTTTC TCTGAGGATCATCATGCATGACAATTTGCACCTCATAACCAGAATTTGCAGGAAGCTTCA GGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGA AACTGCAATCCTGCTAGTGATCCATTAACAAACCAGCCCCTGTTATCAGCAAACATCATT AACAAGCATATTTTTCTGCTTTATTTGGAGAAGAAAGCTTTGCGCATCGATGCTGAAATA TAAATTGAACTGCAGTAGGAAGATGATTTTGTTGCCTCTTTTTTGGCTGCCTCATTCT



consensusID : consensus_10005#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1097
fasta sequence
                              [TCCTCTTTCTCTGAGGATCATCATGCCTTGAGGAGAAGCATTGCTGAATCCTCTTGGCGGCCCCCTTGCTTATCACACACAAAATTCGGCCACACCAACAAAATCGGCCTAAAGCATGACAATTTGCACCTCATAACCAGAATTTGCAGGAGGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGAAACTGCAATCCTGCTAGTGATCCATTACCAAACCAGTCCCTGTTGTCAGCAAGCATCATTAACAAGATCCTCCATCTGATAGATGCTCTAGATCTGCTATGCCGAAGGTCATACATTGCGTTGGATCAGTTGCTTTTGGATACCCAAGAAGCGCTGAAGATCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCTATCAGAAGGAAACCAAAGCTGTAATTTTATTCTGAGGTTAGCGCTGCGCGCAAAGAAATCCGCGACGAAGCTGAAGCGATCGGCAGAGATGGGGAGCATGTACCGGCATCTGCGTGACCGATCTAGTAGAAGGCGGCGCTTCTCACCTGCATGGCGGCAAGAGCTCGCGCGACAAGAAAGCCCGGGCGTCGCCGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGGCATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGAGGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTGAAAGACGCCGTCGGCGCGTTCCAATCCATGGACATGGGCGAGCTGGCGAGGTTCCACTGCAGCTCGCGTGCCTGACCGACGAGACGCAGGTTCGAGGGCTTCCCTTCAAAGAAGCTGGAGGC-GCTGAGAATGGCCGCGGCGCTCTACTCCAAGCTGGACGGCGTCGTTGCCACGCCGAGTATTTTAAACATGCAAAAAAAAAATTCTTACTTTTTGAAAAATATGTATATATATAAAGGTCTTGTTTAGTTGGGGAAAATTTTTAGGTTTGATTGTCATATCGAATATACGGATACACATTTGAAGTATTAAACGTAGTCTAATAACAAAACAAATTACA]

[+] EMBL AK100109             [TCCTCTTTCTCTGAGGATCATCATGCCTTGAGGAGAAGCATTGCTGAATCCTCTTGGCGGCCCCCTTGCTTATCACACACAAAATTCGGCCACACCAACAAAATCGGCCTAAAGCATGACAATTTGCACCTCATAACCAGAATTTGCAGGAGGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGAAACTGCAATCCTGCTAGTGATCCATTACCAAACCAGTCCCTGTTGTCAGCAAGCATCATTAACAAGATCCTCCATCTGATAGATGCTCTAGATCTGCTATGCCGAAGGTCATACATTGCGTTGGATCAGTTGCTTTTGGATACCCAAGAAGCGCTGAAGATCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCTATCAGAAGGAAACCAAAGCTGTAATTTTATTCTGAGGTTAGCGCTGCGCGCAAAGAAATCCGCGACGAAGCTGAAGCGATCGGCAGAGATGGGGAGCATGTACCGGCATCTGCGTGACCGATCTAGTAGAAGGCGGCGCTTCTCACCTGCATGGCGGCAAGAGCTCGCGCGACAAGAAAGCCCGGGCGTCGCCGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGGCATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGAGGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTGAAAGACGCCGTCGGCGCGTTCCAATCCATGGACATGGGCGAGCTGGCGAGGTTCCACTGCAGCTCGCGTGCCTGACCGACGAGACGCAGGTTCGAGGGCTTCCCTTCAAAGAAGCTGGAGGC GCTGAGAATGGCCGCGGCGCTCTACTCCAAGCTGGACGGCGTCGTTGCCACGCCGAGTATTTTAAACATGCAAAAAAAAAATTCTTACTTTTTGAAAAATATGTATATATATAAAGGTCTTGTTTAGTTGGGGAAAATTTTTAGGTTTGATTGTCATATCGAATATACGGATACACATTTGAAGTATTAAACGTAGTCTAATAACAAAACAAATTACA]
[+] EMBL AU172666             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGGCATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGAGGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTGAAAGACGCCGTCGGCGCGTTCCAATCCATGGACATGGGCGAGCTGGCGAGGTTCCACTGCAGCTCGCGTGCCTGACCGACGAGACGCAGGTTCGAGGGCTTCCCTTCAAAGAAGCTGGAGGCGGCTGAGAATGGCCGCGGCGCTCTACTCCAAGCTGGACGGCGTCGTTGCCACGCCGAGTATTTTAAACATGC AAAAAAAAATTCTTACTTTTTGAAAAATATGTATATATATAAAGGTCTTGTTTAGTTGGGGAAAATTTTTAGGTTTGATTGTCATATCGAATATACGGATACACATTTGAAGTATTAAAaaaaa                      ]


>consensus_10005#1 TCCTCTTTCTCTGAGGATCATCATGCCTTGAGGAGAAGCATTGCTGAATCCTCTTGGCGG CCCCCTTGCTTATCACACACAAAATTCGGCCACACCAACAAAATCGGCCTAAAGCATGAC AATTTGCACCTCATAACCAGAATTTGCAGGAGGCTTCAGGCGTTTTCAACAGACATGAAG GCCTGGCATTACTGACAACTATTGTTGAGGGTGGTGGAAACTGCAATCCTGCTAGTGATC CATTACCAAACCAGTCCCTGTTGTCAGCAAGCATCATTAACAAGATCCTCCATCTGATAG ATGCTCTAGATCTGCTATGCCGAAGGTCATACATTGCGTTGGATCAGTTGCTTTTGGATA CCCAAGAAGCGCTGAAGATCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACA ATACTTCCTCTATCAGAAGGAAACCAAAGCTGTAATTTTATTCTGAGGTTAGCGCTGCGC GCAAAGAAATCCGCGACGAAGCTGAAGCGATCGGCAGAGATGGGGAGCATGTACCGGCAT CTGCGTGACCGATCTAGTAGAAGGCGGCGCTTCTCACCTGCATGGCGGCAAGAGCTCGCG CGACAAGAAAGCCCGGGCGTCGCCGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGG CATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGA GGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTGAAAGACGCCGTCGGCGCGTTCCA ATCCATGGACATGGGCGAGCTGGCGAGGTTCCACTGCAGCTCGCGTGCCTGACCGACGAG ACGCAGGTTCGAGGGCTTCCCTTCAAAGAAGCTGGAGGCGCTGAGAATGGCCGCGGCGCT CTACTCCAAGCTGGACGGCGTCGTTGCCACGCCGAGTATTTTAAACATGCAAAAAAAAAA TTCTTACTTTTTGAAAAATATGTATATATATAAAGGTCTTGTTTAGTTGGGGAAAATTTT TAGGTTTGATTGTCATATCGAATATACGGATACACATTTGAAGTATTAAACGTAGTCTAA TAACAAAACAAATTACA



consensusID : consensus_10005#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [CTGAAGATCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCTGTATGTACAGCAGATCAGAAGGAAACCAAAGCTGTAATTTNATTCTGAGGTTAGCGCTGCGGANAAGAAATCCGCGACGAAGCTGAAGCGATCGGCAGAGATGGGGAGCATGTACCGGCATCTGCGTGACCGATCTAGTAGAAGGCGGCGCTTCTNACCTGCATGGCGGCAAGAGCTCGCGCGACAAGAAAGCCCGGGCGTCGCGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGGCATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGAGGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTNAANACGCCGTCGGNCGTTCCAATCCATGGACATGGGCGANTT]

[+] EMBL C73225               [CTGAAGATCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCTGTATGTACAGCAGATCAGAAGGAAACCAAAGCTGTAATTTNATTCTGAGGTTAGCGCTGCGGANAAGAAATCCGCGACGAAGCTGAAGCGATCGGCAGAGATGGGGAGCATGTACCGGCATCTGCGTGACCGATCTAGTAGAAGGCGGCGCTTCTNACCTGCATGGCGGCAAGAGCTCGCGCGACAAGAAAGCCCGGGCGTCGCGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGGCATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGAGGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTNAANACGCCGTCGGNCGTTCCAATCCATGGACATGGGCGANTT]


>consensus_10005#2 CTGAAGATCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCT GTATGTACAGCAGATCAGAAGGAAACCAAAGCTGTAATTTNATTCTGAGGTTAGCGCTGC GGANAAGAAATCCGCGACGAAGCTGAAGCGATCGGCAGAGATGGGGAGCATGTACCGGCA TCTGCGTGACCGATCTAGTAGAAGGCGGCGCTTCTNACCTGCATGGCGGCAAGAGCTCGC GCGACAAGAAAGCCCGGGCGTCGCGGCGGCCGGCGCCAAGGGCGGTGGTGCAGGTCATGG CATGGCCGACGCATCGGCCGAGATGACCAAGAGATCGGCCTACTTCCGGCAAATCGAGGA GGACGTCGGAACCCACCCGGCGGCGATCCTGGAGCTNAANACGCCGTCGGNCGTTCCAAT CCATGGACATGGGCGANTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10005#1      ------------------------------------------------------------
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      CGCGAGAGGAGAAGCGAAGAGGCGACGGCATGCGGCTGGCGACGCGAGAGGCGACGGCGA 60
                                                                                   

consensus_10005#1      -------------------------------------TCCTCTTTCTCTGAGGATCATCA 23
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      CGACGACCCGCTTCCCATCCGACGTCCACGCTCTCCGCCGCCTTCTCGCCAGTAACGCAT 120
                                                                                   

consensus_10005#1      TGCCTTGAGGAGAAGCATTGCTGAATCCTCTTGGCGGCCCCCTTGCTTATCACACACAAA 83
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      CACCGTCGTCTTCCTTGTTCCTTTCTCTCCCCGGCGCTAGGGTTGTTGCTTGCTAGGGTT 180
                                                                                   

consensus_10005#1      ATTCGGCCACACCAACAAAATCGGC-CTAAAGCATGACAATTTGCACCTCATAACCAGAA 142
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      CTTGGCCACCGCCTCCTCCCCTGCCGCTGTAGCACGCCACCGCCGCCTCCTTGGTTTTTG 240
                                                                                   

consensus_10005#1      TTTGCAGGAGGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTAT 202
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      CTTGCTAGGGTTCTTGTGCTGCTGCTGCTCTTCTTCCGCCCAAATGAGGGCTTTCCAAGG 300
                                                                                   

consensus_10005#1      TGTTGAGGGTGGTGGAAACTGCAATCCTGCTAGTGATCCATTACCAAACCAGTCCCTGTT 262
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      GCTGGTGTTTGTTGGGGATTCCGATCCGCGTAGGGGGTGGGGATGGGGGAATCGTGATGG 360
                                                                                   

consensus_10005#1      GTCAGCAAGCATCATTAACAAGATCCTCCATCTGATAGATGCTCTAGATCTGCTATGCCG 322
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      GTTCTTGGAGATTTGGTCTGTGGTTTAGGTTCTTGCAGTGTTGCGGGGGATTCTTGGTGG 420
                                                                                   

consensus_10005#1      AAGGTC---ATACATTGCGTTGGATCAGTTGCTTTTGGATACCCAAGAAGCGCTGAAG-A 378
consensus_10005#2      ----------------------------------------------------CTGAAG-A 7
consensus_10005#0      AAGAGCCCTAGGTTCTTGGTTCTGTTTCTTGCCCTAGATCTTGGCTGAAGGATCGATGTG 480
                                                                             ** *  

consensus_10005#1      TCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCT------- 431
consensus_10005#2      TCGCATACCCGAAATGTTTATCAGGCTTATCTGCATACCACAATACTTCCTCTGTATGTA 67
consensus_10005#0      TTGCATAGCC-ATGGATCTGTCAACCAGCTTCCCTTTCAGTTTGTCTTCTTCTCGAATGA 539
                       * ***** ** *    * * ***  *   *   * * *       **** ***       

consensus_10005#1      --------ATCAGAAGGAAACCAAAGC-TGTAATTTTATTCTGAGGTTAGCGCTGCGCGC 482
consensus_10005#2      --CAGCAGATCAGAAGGAAACCAAAGC-TGTAATTTNATTCTGAGGTTAGCGCTGCG-GA 123
consensus_10005#0      ACCAGGAAATTATGCTGAAAAAAAAACATGTCACTGTAACTGGACTGGTGCTCCATCTCT 599
                               ** *    ****  *** * *** * *  *    **     ** *       

consensus_10005#1      AAAGAAATCCGCGACGAAGCTGAAGCGA-TCGGCAGAGATGGGGAGCATGTACCGGCATC 541
consensus_10005#2      NAAGAAATCCGCGACGAAGCTGAAGCGA-TCGGCAGAGATGGGGAGCATGTACCGGCATC 182
consensus_10005#0      GTTTTTGTACTCACCCAAGCCAGGCTAAGTCAAGATTGTTATTAAATTCAGTGTTGCATA 659
                              * * *  * ****       * **   *  * *    *          **** 

consensus_10005#1      TGCGTGACCGATCTAGTAGAAGGC----GGCGCTTCTCACCTGCATGGCGGCA-AGAGCT 596
consensus_10005#2      TGCGTGACCGATCTAGTAGAAGGC----GGCGCTTCTNACCTGCATGGCGGCA-AGAGCT 237
consensus_10005#0      AGAAAAGATCCTTTGATAACCAGTTTTTGTCAGTTCTTGATGGCATTTCTGTTCATTATT 719
                        *         * *  **    *     * *  ****     ****  * *   *    *

consensus_10005#1      CGCGCGACAAGAAAGCCCGGGCGTCGCCGGC-GGCCGGCGCCAAGGGCGGTGGTGCAGGT 655
consensus_10005#2      CGCGCGACAAGAAAGCCCGGGCGTCGC-GGC-GGCCGGCGCCAAGGGCGGTGGTGCAGGT 295
consensus_10005#0      CAGATTTTGATAACCACATGTCCTCATGGATTAGCTGCTTTTTAGCTTGGATACTTAATT 779
                       *        * **   *  * * **   *    ** *      **   **      *  *

consensus_10005#1      CATGGCA----TGGCCGACGCATCGGCCGA----GATGACCAAGAGATCGGCCTACTTCC 707
consensus_10005#2      CATGGCA----TGGCCGACGCATCGGCCGA----GATGACCAAGAGATCGGCCTACTTCC 347
consensus_10005#0      TTAGCCAGCACTGGCTGCCTCAACAAACTACTATGCTAATTATAAACCTTTTCTATTTCC 839
                          * **    **** * * ** *   * *    * * *  *  *       *** ****

consensus_10005#1      GGCAAATCGAGGAGGA--CGTCGGAACCCACCCGGCGGCGATCCTGGAGCTGAAAGACGC 765
consensus_10005#2      GGCAAATCGAGGAGGA--CGTCGGAACCCACCCGGCGGCGATCCTGGAGCTNAAN-ACGC 404
consensus_10005#0      ATCTTTCTGTTTATGATTCATTAAATCTTAGCCATTTTCCATCA-GATGCTTTGG--TCC 896
                         *     *   * **  * *   * *  * **     * ***  *  ***        *

consensus_10005#1      CGTCGGCGCGTTCCAATCCATGGACATGGGCGAGCTGGCGAGGTTCCACTGCAGCTCGCG 825
consensus_10005#2      CGTCGGN-CGTTCCAATCCATGGACATGGGCGANTT------------------------ 439
consensus_10005#0      CTTC--TCCCTTTCTCTGCATATATCATTGTAGATTGTCCTTGTTCCGATGGGGCCATCC 954
                       * **    * ** *  * ***  *     *     *                        

consensus_10005#1      TGCCTGACCGACGAGACGCAGGTTCGAGGGCTTCCCTTCAAAGAAGCTGGAGGCGCTGAG 885
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      TCTTTCTCTGAGGATCATCATGCATGACAATTTGCAC-CTCATAACCAGAATTTGCAGGA 1013
                                                                                   

consensus_10005#1      AATGGCCGCGGCGCTCTACTCCAAGCTGGACGGCGTCGTTGCCACGCCGAGTATTTTAAA 945
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      AGCTTCAGGCGTTTTCAACAGACATGAAGGCCTGGCATTACTGACAACTATTGTTGAGGG 1073
                                                                                   

consensus_10005#1      CATGCAAAAAAAAAATTCTT------ACTTTTTGAAAAATATGTATATATATAAAGGTCT 999
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      TGGTGGAAACTGCAATCCTGCTAGTGATCCATTAACAAACCAGCCCCTGTTATCAGCAAA 1133
                                                                                   

consensus_10005#1      TGTTTAGTTGGGGAAAATTTTTAGGTTTGATTGTCATATCGAATATACGGATACACAT-T 1058
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      CATCATTAACAAGCATATTTTTCTGCTTTATTTGGAGAAGAAAGCTTTGCGCATCGATGC 1193
                                                                                   

consensus_10005#1      TGAAGTATTAAACGTAGTCTAATAACAAAACAAATTACA--------------------- 1097
consensus_10005#2      ------------------------------------------------------------
consensus_10005#0      TGAAATATAAATTGAACTGCAGTAGGAAGATGATTTTGTTGCCTCTTTTTTGGCTGCCTC 1253
                                                                                   

consensus_10005#1      -----
consensus_10005#2      -----
consensus_10005#0      ATTCT 1258
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)