cluster # 10028

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Oryza sativa
cluster # 10028 cluster # 10028 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10028#0 length = 3055 sequences # 6

consensus_10028#1 length = 375 sequences # 1

consensusID : consensus_10028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3055
fasta sequence

                              [TGCTGCTGTCCTACCAAACTTTTACTACTCCTACCACCACCAGCTTCTTGCTCGCCTTTCCCTTTCTCTCCCTCTCTCTCTCTCTCTCTCTTCTCTCCTCTCTCTGCATCCTCTGCTCAGTGCTCATTCCATTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGAGTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCTCTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGTCGGCGACAAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGATACAACAATGTTTAGGTGCGAAGGAGAGCATGTAGCCCGTGTAACAGAAGTACCGTTTTCACGGTCCTCCCTAGATCACAAGGCAGTGTTTGTCGTGGACACGGAATCAAAGATCTTCCTTTTCAGTGGATGTAACTCTAGCATGCAAACAAGGGCTAAGGCTTTAGATGTTGTTAAGCACCTCAAAGAGAACCGACATTGTGGCAGATGTGAGATTGCGACTATAGAGGATGGGAAACTTGTTGGTGACTCTGATGCTGGTGATTTCTGGAACTTATTTGGAGGCTATGCTCCTATTCCCCGTGATGTACAAGACACGGTTATGACAGAACTGATGACTACCTCATCCAAGAAACTATTTTGGATTAACAAGAGAAACCTTGTTCCTGTGGAGACAAATCTGTTAGAAAGAGAAATGCTGAACTCGGACAGAAATTACATTCTGGACTGTGGCACCGAAGTATTCCTATGGATGGGTATGACAACACTGGTTTCTGAGAGGAGGACATCAGTTACTGCCCTAGAAGATTATGTGCGTTGTGAAGGAAGGCAATCGAATGCACGTTCAGTTATATTGACAGAAGGTCATGAAACCGTTGAATTTAAGATGCATTTTCAGCATTGGCCCAAGAATGCTGTGCCAAAGTTATACGAGGCAGGGCGGGAGAAGGTGGCAGCAATTTTCAAGCATCAGGGCTATGATGTCACAGAAATCCCAGAGGATAAACCTCGTCACTTCATCAGTTGTAATGGTAGTCTGAAGGTTTGGTTGGTGGACAATGGTTCTGTAACCCTGCTTTGCACTGAGGAGCAGGAACAACTATACAATGGGGACTGCTATATCATACGGTATAGCTACATCGAAGACGGAAAAGACTATCATTTGTTCTTTGCTTGGTCTGGACTGAACAGCATAAATGAAGATAGAGTTGCAGCAGCGTCACTAATGTCAGGCATGATTGATTCAGTAAAAGGGCATGCGGTTGTGGCACAAGTATTCGAGGGCAGAGAACCAGAAATGTTTTTCCTAGTATTCAAGTCATTGATCATATTCAAGGGGGGCAGGAGTATGGCATATAAGAACTTCGTTTCTCAGAGAAGCGATGCAAACGGATGGTACCAGAAAAATGGGGTTGCTCTATTCCGGGTTCAAGGGCTGAAACATGATTGCATACGAGCCATTCAGGTTGATCTGGCTGCAAGTTCACTTAATTCTTCGCATTGTTACATTTTGCAAGCTGGTGGTTCTTTCTTTACCTGGCTAGGAAGCCTTTCTTCACCAAGTGACCACAATTTACTTGACAGGATGATGGATAAGTTGTGTCCACTGAAACAATCCTTGTTGGTAAGAGAAGGTTCTGAACCTGATCGCTTCTGGGAAGCATTAGGCGGAAGATCAGAATACTTGAGAGAAAAGCAAGTCAAGGATTGGCCTGCAGATCCACATCTGTATACTTGTCATTTCGAACAAGGTC-CTTCAAGGCAAAGGAGGTATTCAGCTTCTCTCAGGATGACCTGGTAACTGAAGAGATATTGATACTGGACTGCGTCGAAGAACTCCATATTTGGGTTGGACATCAATCTGGTGTTTTATCCAAGGAGCAAGCTCTTGATATCGGCAAGATGTTCCTTCAGGCAGGCATTCATCAGGACGGACGACGGCCAATCGACACGACAATGTATATCGTCACTGAAGGGGATGAGCCTAGATTTTTCACGAGCTTCTTCAACTGGGATTATTCCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTGAAAGGAATTTCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCTTCGCTGCCGAGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGAGCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCGGCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCGCCGGCGTCGTGGAACTCGACGCCGTCCAC-GGTGGCGCGGCGGCTCTTCCCGCCCTCGCTGCACGCGTCGGCGGAGGCGGTTGCCACCGGGACCCCTCGCCGGCGGTGAGCTTCAGCTAAC-GCTCACCTGCAACTGCATATGCCTGTACCATTAAGAATTTGAGATTCAGATGAAATTCAAAGAACATCGGCCATCTTTTTACAAGGTCCCTAGATTTTCAAATTTAAATTAGGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCAACGAAGAAAACAAAGCACCAAATATGAATATGAATTAACTAAGGCATGTTTGTTTCAGCTTATGATTATTATAAT]

[+] EMBL AK073497             [TGCTGCTGTCCTACCAAACTTTTACTACTCCTACCACCACCAGCTTCTTGCTCGCCTTTCCCTTTCTCTCCCTCTCTCTCTCTCTCTCTCTTCTCTCCTCTCTCTGCATCCTCTGCTCAGTGCTCATTCCATTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGAGTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCTCTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTGGGCGTCGGCGACAAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGATACAACAATGTTTAGGTGCGAAGGAGAGCATGTAGCCCGTGTAACAGAAGTACCGTTTTCACGGTCCTCCCTAGATCACAAGGCAGTGTTTGTCGTGGACACGGAATCAAAGATCTTCCTTTTCAGTGGATGTAACTCTAGCATGCAAACAAGGGCTAAGGCTTTAGATGTTGTTAAGCACCTCAAAGAGAACCGACATTGTGGCAGATGTGAGATTGCGACTATAGAGGATGGGAAACTTGTTGGTGACTCTGATGCTGGTGATTTCTGGAACTTATTTGGAGGCTATGCTCCTATTCCCCGTGATGTACAAGACACGGTTATGACAGAACTGATGACTACCTCATCCAAGAAACTATTTTGGATTAACAAGAGAAACCTTGTTCCTGTGGAGACAAATCTGTTAGAAAGAGAAATGCTGAACTCGGACAGAAATTACATTCTGGACTGTGGCACCGAAGTATTCCTATGGATGGGTATGACAACACTGGTTTCTGAGAGGAGGACATCAGTTACTGCCCTAGAAGATTATGTGCGTTGTGAAGGAAGGCAATCGAATGCACGTTCAGTTATATTGACAGAAGGTCATGAAACCGTTGAATTTAAGATGCATTTTCAGCATTGGCCCAAGAATGCTGTGCCAAAGTTATACGAGGCAGGGCGGGAGAAGGTGGCAGCAATTTTCAAGCATCAGGGCTATGATGTCACAGAAATCCCAGAGGATAAACCTCGTCACTTCATCAGTTGTAATGGTAGTCTGAAGGTTTGGTTGGTGGACAATGGTTCTGTAACCCTGCTTTGCACTGAGGAGCAGGAACAACTATACAATGGGGACTGCTATATCATACGGTATAGCTACATCGAAGACGGAAAAGACTATCATTTGTTCTTTGCTTGGTCTGGACTGAACAGCATAAATGAAGATAGAGTTGCAGCAGCGTCACTAATGTCAGGCATGATTGATTCAGTAAAAGGGCATGCGGTTGTGGCACAAGTATTCGAGGGCAGAGAACCAGAAATGTTTTTCCTAGTATTCAAGTCATTGATCATATTCAAGGGGGGCAGGAGTATGGCATATAAGAACTTCGTTTCTCAGAGAAGCGATGCAAACGGATGGTACCAGAAAAATGGGGTTGCTCTATTCCGGGTTCAAGGGCTGAAACATGATTGCATACGAGCCATTCAGGTTGATCTGGCTGCAAGTTCACTTAATTCTTCGCATTGTTACATTTTGCAAGCTGGTGGTTCTTTCTTTACCTGGCTAGGAAGCCTTTCTTCACCAAGTGACCACAATTTACTTGACAGGATGATGGATAAGTTGTGTCCACTGAAACAATCCTTGTTGGTAAGAGAAGGTTCTGAACCTGATCGCTTCTGGGAAGCATTAGGCGGAAGATCAGAATACTTGAGAGAAAAGCAAGTCAAGGATTGGCCTGCAGATCCACATCTGTATACTTGTCATTTCGAACAAGGTC CTTCAAGGCAAAGGAGGTATTCAGCTTCTCTCAGGATGACCTGGTAACTGAAGAGATATTGATACTGGACTGCGTCGAAGAACTCCATATTTGGGTTGGACATCAATCTGGTGTTTTATCCAAGGAGCAAGCTCTTGATATCGGCAAGATGTTCCTTCAGGCAGGCATTCATCAGGACGGACGACGGCCAATCGACACGACAATGTATATCGTCACTGAAGGGGATGAGCCTAGATTTTTCACGAGCTTCTTCAACTGGGATTATTCCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTGAAAGGAATTTCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCTTCGCTGCCGAGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGAGCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCGGCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCGCCGGCGTCGTGGAACTCGACGCCGTCCAC GGTGGCGCGGCGGCTCTTCCCGCCCTCGCTGCACGCGTCGGCGGAGGCGGTTGCCACCGGGACCCCTCGCCGGCGGTGAGCTTCAGCTAAC GCTCACCTGCAACTGCATATGCCTGTACCATTAAGAATTTGAGATTCAGATGAAATTCAAAGAACATCGGCCATCTTTTTACAAGGTCCCTAGATTTTCAAATTTAAATTAGGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCAACGAAGAAAACAAAGCACCAAATATGAATATGAATTAACTAAGGCATGTTTGTTTCAGCTTATGATTATTATAAT]
[+] EMBL CB639754             [                                                                                                                                   TTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGAGTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCTCTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGTCGGCGACTAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGATACAACAATGTTTAAGTGCGAAGGAGAGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB639406             [                                                                                                                                   TTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGAGTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCTCTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGTCGGCGACAAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK072095             [                                                                                                                                          TCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGAGTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCTCTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGTCGGCGACAAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGATACAACAATGTTTAGGTGCGAAGGAGAGCATGTAGCCCGTGTAACAGAAGTACCGTTTTCACGGTCCTCCCTAGATCACAAGGCAGTGTTTGTCGTGGACACGGAATCAAAGATCTTCCTTTTCAGTGGATGTAACTCTAGCATGCAAACAAGGGCTAAGGCTTTAGATGTTGTTAAGCACCTCAAAGAGAACCGACATTGTGGCAGATGTGAGATTGCGACTATAGAGGATGGGAAACTTGTTGGTGACTCTGATGCTGGTGATTTCTGGAACTTATTTGGAGGCTATGCTCCTATTCCCCGTGATGTACAAGACACGGTTATGACAGAACTGATGACTACCTCATCCAAGAAACTATTTTGGATTAACAAGAGAAACCTTGTTCCTGTGGAGACAAATCTGTTAGAAAGAGAAATGCTGAACTCGGACAGAAATTACATTCTGGACTGTGGCACCGAAGTATTCCTATGGATGGGTATGACAACACTGGTTTCTGAGAGGAGGACATCAGTTACTGCCCTAGAAGATTATGTGCGTTGTGAAGGAAGGCAATCGAATGCACGTTCAGTTATATTGACAGAAGGTCATGAAACCGTTGAATTTAAGATGCATTTTCAGCATTGGCCCAAGAATGCTGTGCCAAAGTTATACGAGGCAGGGCGGGAGAAGGTGGCAGCAATTTTCAAGCATCAGGGCTATGATGTCACAGAAATCCCAGAGGATAAACCTCGTCACTTCATCAGTTGTAATGGTAGTCTGAAGGTTTGGTTGGTGGACAATGGTTCTGTAACCCTGCTTTGCACTGAGGAGCAGGAACAACTATACAATGGGGACTGCTATATCATACGGTATAGCTACATCGAAGACGGAAAAGACTATCATTTGTTCTTTGCTTGGTCTGGACTGAACAGCATAAATGAAGATAGAGTTGCAGCAGCGTCACTAATGTCAGGCATGATTGATTCAGTAAAAGGGCATGCGGTTGTGGCACAAGTATTCGAGGGCAGAGAACGAGAAATGTTTTTCCTAGTATTCAAGTCATTGATCATATTCAAGGGGGGCAGGAGTATGGCATATAAGAACTTCGTTTCTCAGAGAAGCGATGCAAACGGATGGTACCAGAAAAATGGGGTTGCTCTATTCCGGGTTCAAGGGCTGAAACATGATTGCATACGAGCCATTCAGGTTGATCTGGCTGCAAGTTCACTTAATTCTTCGCATTGTTACATTTTGCAAGCTGGTGGTTCTTTCTTTACCTGGCTAGGAAGCCTTTCTTCACCAAGTGACCACAATTTACTTGACAGGATGATGGATAAGTTGTGTCCACTGAAACAATCCTTGTTGGTAAGAGAAGGTTCTGAACCTGATCGCTTCTGGGAAGCATTAGGCGGAAGATCAGAATACTTGAGAGAAAAGCAAGTCAAGGATTGGCCTGCAGATCCACATCTGTATACTTGTCATTTCGAACAAGGTCTCTTCAAGGCAAAGGAGGTATTCAGCTTCTCTCAGGATGACCTGGTAACTGAAGAGATATTGATACTGGACTGCGTCGAAGAACTCCATATTTGGGTTGGACATCAATCTGGTGTTTTATCCAAGGAGCAAGCTCTTGATATCGGCAAGATGTTCCTTCAGGCAGGCATTCATCAGGACGGACGACGGCCAATCGACACGACAATGTATATCGTCACTGAAGGGGATGAGCCTAGATTTTTCACGAGCTTCTTCAACTGGGATTATTCCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTGAAAGGAATTTCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCTTCGCTGCCGAGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGAGCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCGGCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCGCCGGCGTCGTGGAACTCGACGCCGTCCAC GGTGGCGCGGCGGCTCTTCCCGCCCTCGCTGCACGCGTCGGCGGAGGCGGTTGCCACCGGGACCCCTCGCCGGCGGTGAGCTTCAGCTAAC GCTCACCTGCAACTGCATATGCCTGTACCATTAAGAATTTGAGATTCAGATGAAATTCAAAGAACATCGG                                                                                                                                                            ]
[+] EMBL AU184564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTGAAAGGAATTTCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCTTCGCTGCCGAGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGAGCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCGGCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCGCCGGCGTCGTGGAACTCGACGCCGTCCAC GGTGGCGCGGNGGNTCTTCCCGCCCTC                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU184565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAGCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCNCCGGCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCGCCGGCGTCGTGGAACTCGACGCCGTCCACGGGTGGCGCGGCGGCTCTTNCCGCCCTCGCTGCACGCGTCGGCGGAGGCGGTTGCCACCGGGACCCCTCGCCGGCGGTGAGCTTCAGCTAACGGCTCACCTGCAACTGCATATGCCTGTACCATTAAGAATTTGAGATTCAGATGAAATTCAAAGAACATCGGCCATCTTTTTAAAAaa                                                                                                                                            ]




>consensus_10028#0
TGCTGCTGTCCTACCAAACTTTTACTACTCCTACCACCACCAGCTTCTTGCTCGCCTTTC
CCTTTCTCTCCCTCTCTCTCTCTCTCTCTCTTCTCTCCTCTCTCTGCATCCTCTGCTCAG
TGCTCATTCCATTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGA
GTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCT
CTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGT
CGGCGACAAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGA
AAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGA
GCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGA
GGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAA
CACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAA
ACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAA
ATCAAAGGATACAACAATGTTTAGGTGCGAAGGAGAGCATGTAGCCCGTGTAACAGAAGT
ACCGTTTTCACGGTCCTCCCTAGATCACAAGGCAGTGTTTGTCGTGGACACGGAATCAAA
GATCTTCCTTTTCAGTGGATGTAACTCTAGCATGCAAACAAGGGCTAAGGCTTTAGATGT
TGTTAAGCACCTCAAAGAGAACCGACATTGTGGCAGATGTGAGATTGCGACTATAGAGGA
TGGGAAACTTGTTGGTGACTCTGATGCTGGTGATTTCTGGAACTTATTTGGAGGCTATGC
TCCTATTCCCCGTGATGTACAAGACACGGTTATGACAGAACTGATGACTACCTCATCCAA
GAAACTATTTTGGATTAACAAGAGAAACCTTGTTCCTGTGGAGACAAATCTGTTAGAAAG
AGAAATGCTGAACTCGGACAGAAATTACATTCTGGACTGTGGCACCGAAGTATTCCTATG
GATGGGTATGACAACACTGGTTTCTGAGAGGAGGACATCAGTTACTGCCCTAGAAGATTA
TGTGCGTTGTGAAGGAAGGCAATCGAATGCACGTTCAGTTATATTGACAGAAGGTCATGA
AACCGTTGAATTTAAGATGCATTTTCAGCATTGGCCCAAGAATGCTGTGCCAAAGTTATA
CGAGGCAGGGCGGGAGAAGGTGGCAGCAATTTTCAAGCATCAGGGCTATGATGTCACAGA
AATCCCAGAGGATAAACCTCGTCACTTCATCAGTTGTAATGGTAGTCTGAAGGTTTGGTT
GGTGGACAATGGTTCTGTAACCCTGCTTTGCACTGAGGAGCAGGAACAACTATACAATGG
GGACTGCTATATCATACGGTATAGCTACATCGAAGACGGAAAAGACTATCATTTGTTCTT
TGCTTGGTCTGGACTGAACAGCATAAATGAAGATAGAGTTGCAGCAGCGTCACTAATGTC
AGGCATGATTGATTCAGTAAAAGGGCATGCGGTTGTGGCACAAGTATTCGAGGGCAGAGA
ACCAGAAATGTTTTTCCTAGTATTCAAGTCATTGATCATATTCAAGGGGGGCAGGAGTAT
GGCATATAAGAACTTCGTTTCTCAGAGAAGCGATGCAAACGGATGGTACCAGAAAAATGG
GGTTGCTCTATTCCGGGTTCAAGGGCTGAAACATGATTGCATACGAGCCATTCAGGTTGA
TCTGGCTGCAAGTTCACTTAATTCTTCGCATTGTTACATTTTGCAAGCTGGTGGTTCTTT
CTTTACCTGGCTAGGAAGCCTTTCTTCACCAAGTGACCACAATTTACTTGACAGGATGAT
GGATAAGTTGTGTCCACTGAAACAATCCTTGTTGGTAAGAGAAGGTTCTGAACCTGATCG
CTTCTGGGAAGCATTAGGCGGAAGATCAGAATACTTGAGAGAAAAGCAAGTCAAGGATTG
GCCTGCAGATCCACATCTGTATACTTGTCATTTCGAACAAGGTCCTTCAAGGCAAAGGAG
GTATTCAGCTTCTCTCAGGATGACCTGGTAACTGAAGAGATATTGATACTGGACTGCGTC
GAAGAACTCCATATTTGGGTTGGACATCAATCTGGTGTTTTATCCAAGGAGCAAGCTCTT
GATATCGGCAAGATGTTCCTTCAGGCAGGCATTCATCAGGACGGACGACGGCCAATCGAC
ACGACAATGTATATCGTCACTGAAGGGGATGAGCCTAGATTTTTCACGAGCTTCTTCAAC
TGGGATTATTCCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTG
AAAGGAATTTCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCT
TCGCTGCCGAGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGA
GCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCG
GCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCC
TCCTCGTCGCCGGCGTCGTGGAACTCGACGCCGTCCACGGTGGCGCGGCGGCTCTTCCCG
CCCTCGCTGCACGCGTCGGCGGAGGCGGTTGCCACCGGGACCCCTCGCCGGCGGTGAGCT
TCAGCTAACGCTCACCTGCAACTGCATATGCCTGTACCATTAAGAATTTGAGATTCAGAT
GAAATTCAAAGAACATCGGCCATCTTTTTACAAGGTCCCTAGATTTTCAAATTTAAATTA
GGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCAACGAAGAAAACAAAGCACCA
AATATGAATATGAATTAACTAAGGCATGTTTGTTTCAGCTTATGATTATTATAAT

consensusID : consensus_10028#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 375
fasta sequence

                              [TTCGCCCGTTCTCCGAGAACCCGCTTCGCTCCGGCCTCCTTCGTTCGCCCGGCGTTCGTGGAACCTCGACCCCCGTCCACCGGTGGCGCCGCCGGCTCTTCCCGCCCTCGCTGCACGCGTCGCCGGAGCCGGTTGCCCACCCGGGACCCCTCGCCCGGCTGTGAGCTTCCAGCTAACCGCTCACCTGGCAACTGCATATGCCTGTACCCTTAAGAATTTGAGATTCAGATGAAATTCCAAGAACATCGGCCATCTTTTTACCAAGGTCCCTAGATTTTCAAATTTAAATTAGGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCAACGAAGAAAACCAANCCCCAATATGAATATGAATTAACTAAAAA]

[+] EMBL BM421458             [TTCGCCCGTTCTCCGAGAACCCGCTTCGCTCCGGCCTCCTTCGTTCGCCCGGCGTTCGTGGAACCTCGACCCCCGTCCACCGGTGGCGCCGCCGGCTCTTCCCGCCCTCGCTGCACGCGTCGCCGGAGCCGGTTGCCCACCCGGGACCCCTCGCCCGGCTGTGAGCTTCCAGCTAACCGCTCACCTGGCAACTGCATATGCCTGTACCCTTAAGAATTTGAGATTCAGATGAAATTCCAAGAACATCGGCCATCTTTTTACCAAGGTCCCTAGATTTTCAAATTTAAATTAGGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCAACGAAGAAAACCAANCCCCAATATGAATATGAATTAACTAAAAA]




>consensus_10028#1
TTCGCCCGTTCTCCGAGAACCCGCTTCGCTCCGGCCTCCTTCGTTCGCCCGGCGTTCGTG
GAACCTCGACCCCCGTCCACCGGTGGCGCCGCCGGCTCTTCCCGCCCTCGCTGCACGCGT
CGCCGGAGCCGGTTGCCCACCCGGGACCCCTCGCCCGGCTGTGAGCTTCCAGCTAACCGC
TCACCTGGCAACTGCATATGCCTGTACCCTTAAGAATTTGAGATTCAGATGAAATTCCAA
GAACATCGGCCATCTTTTTACCAAGGTCCCTAGATTTTCAAATTTAAATTAGGTTTTTAG
AGGAAATTTAAATTAAGTTTCCTCTACTGCAACGAAGAAAACCAANCCCCAATATGAATA
TGAATTAACTAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10028#0      TGCTGCTGTCCTACCAAACTTTTACTACTCCTACCACCACCAGCTTCTTGCTCGCCTTTC 60
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CCTTTCTCTCCCTCTCTCTCTCTCTCTCTCTTCTCTCCTCTCTCTGCATCCTCTGCTCAG 120
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TGCTCATTCCATTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGA 180
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GTGAGTGAAGTGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCT 240
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CTCTCTGCTGCTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGT 300
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CGGCGACAAGCCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGA 360
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      AAAATCATTGCATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGA 420
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GCTTAAAAGCGGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGA 480
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GGAGGATTGTCTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAA 540
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CACGGTCCAATATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAA 600
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      ACCATGCATCATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAA 660
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      ATCAAAGGATACAACAATGTTTAGGTGCGAAGGAGAGCATGTAGCCCGTGTAACAGAAGT 720
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      ACCGTTTTCACGGTCCTCCCTAGATCACAAGGCAGTGTTTGTCGTGGACACGGAATCAAA 780
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GATCTTCCTTTTCAGTGGATGTAACTCTAGCATGCAAACAAGGGCTAAGGCTTTAGATGT 840
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TGTTAAGCACCTCAAAGAGAACCGACATTGTGGCAGATGTGAGATTGCGACTATAGAGGA 900
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TGGGAAACTTGTTGGTGACTCTGATGCTGGTGATTTCTGGAACTTATTTGGAGGCTATGC 960
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TCCTATTCCCCGTGATGTACAAGACACGGTTATGACAGAACTGATGACTACCTCATCCAA 1020
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GAAACTATTTTGGATTAACAAGAGAAACCTTGTTCCTGTGGAGACAAATCTGTTAGAAAG 1080
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      AGAAATGCTGAACTCGGACAGAAATTACATTCTGGACTGTGGCACCGAAGTATTCCTATG 1140
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GATGGGTATGACAACACTGGTTTCTGAGAGGAGGACATCAGTTACTGCCCTAGAAGATTA 1200
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TGTGCGTTGTGAAGGAAGGCAATCGAATGCACGTTCAGTTATATTGACAGAAGGTCATGA 1260
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      AACCGTTGAATTTAAGATGCATTTTCAGCATTGGCCCAAGAATGCTGTGCCAAAGTTATA 1320
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CGAGGCAGGGCGGGAGAAGGTGGCAGCAATTTTCAAGCATCAGGGCTATGATGTCACAGA 1380
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      AATCCCAGAGGATAAACCTCGTCACTTCATCAGTTGTAATGGTAGTCTGAAGGTTTGGTT 1440
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GGTGGACAATGGTTCTGTAACCCTGCTTTGCACTGAGGAGCAGGAACAACTATACAATGG 1500
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GGACTGCTATATCATACGGTATAGCTACATCGAAGACGGAAAAGACTATCATTTGTTCTT 1560
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TGCTTGGTCTGGACTGAACAGCATAAATGAAGATAGAGTTGCAGCAGCGTCACTAATGTC 1620
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      AGGCATGATTGATTCAGTAAAAGGGCATGCGGTTGTGGCACAAGTATTCGAGGGCAGAGA 1680
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      ACCAGAAATGTTTTTCCTAGTATTCAAGTCATTGATCATATTCAAGGGGGGCAGGAGTAT 1740
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GGCATATAAGAACTTCGTTTCTCAGAGAAGCGATGCAAACGGATGGTACCAGAAAAATGG 1800
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GGTTGCTCTATTCCGGGTTCAAGGGCTGAAACATGATTGCATACGAGCCATTCAGGTTGA 1860
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TCTGGCTGCAAGTTCACTTAATTCTTCGCATTGTTACATTTTGCAAGCTGGTGGTTCTTT 1920
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CTTTACCTGGCTAGGAAGCCTTTCTTCACCAAGTGACCACAATTTACTTGACAGGATGAT 1980
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GGATAAGTTGTGTCCACTGAAACAATCCTTGTTGGTAAGAGAAGGTTCTGAACCTGATCG 2040
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      CTTCTGGGAAGCATTAGGCGGAAGATCAGAATACTTGAGAGAAAAGCAAGTCAAGGATTG 2100
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GCCTGCAGATCCACATCTGTATACTTGTCATTTCGAACAAGGTCCTTCAAGGCAAAGGAG 2160
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GTATTCAGCTTCTCTCAGGATGACCTGGTAACTGAAGAGATATTGATACTGGACTGCGTC 2220
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GAAGAACTCCATATTTGGGTTGGACATCAATCTGGTGTTTTATCCAAGGAGCAAGCTCTT 2280
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GATATCGGCAAGATGTTCCTTCAGGCAGGCATTCATCAGGACGGACGACGGCCAATCGAC 2340
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      ACGACAATGTATATCGTCACTGAAGGGGATGAGCCTAGATTTTTCACGAGCTTCTTCAAC 2400
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TGGGATTATTCCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTG 2460
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      AAAGGAATTTCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCT 2520
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      TCGCTGCCGAGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGA 2580
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GCGGCGGCGAGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCG 2640
consensus_10028#1      ------------------------------------------------------------
                                                                                   

consensus_10028#0      GCCGCGCTGTCACCGTCGCTGTCGACGCCTTCGCCG--TCTCCGAGAAGCCGCTCCTCC- 2697
consensus_10028#1      -----------------------------TTCGCCCGTTCTCCGAGAACCCGCTTCGCTC 31
                                                    ******   ********** ***** * *  

consensus_10028#0      --GCCTCCT-CGTCG--CCGGCGT-CGTGGAAC-TCGACGCC-GTCCAC-GGTGGCGCGG 2748
consensus_10028#1      CGGCCTCCTTCGTTCGCCCGGCGTTCGTGGAACCTCGACCCCCGTCCACCGGTGGCGCCG 91
                         ******* ***    ******* ******** ***** ** ****** ******** *

consensus_10028#0      C-GGCTCTTCCCGCCCTCGCTGCACGCGTCGGCGGAGGCGGTTGCCA--CCGGGACCCCT 2805
consensus_10028#1      CCGGCTCTTCCCGCCCTCGCTGCACGCGTCGCCGGAGCCGGTTGCCCACCCGGGACCCCT 151
                       * ***************************** ***** ********   ***********

consensus_10028#0      CGCC-GGCGGTGAGCTTC-AGCTAAC-GCTCACCTG-CAACTGCATATGCCTGTACCATT 2861
consensus_10028#1      CGCCCGGCTGTGAGCTTCCAGCTAACCGCTCACCTGGCAACTGCATATGCCTGTACCCTT 211
                       **** *** ********* ******* ********* ******************** **

consensus_10028#0      AAGAATTTGAGATTCAGATGAAATTCAAAGAACATCGGCCATCTTTTTAC-AAGGTCCCT 2920
consensus_10028#1      AAGAATTTGAGATTCAGATGAAATTCCAAGAACATCGGCCATCTTTTTACCAAGGTCCCT 271
                       ************************** *********************** *********

consensus_10028#0      AGATTTTCAAATTTAAATTAGGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCA 2980
consensus_10028#1      AGATTTTCAAATTTAAATTAGGTTTTTAGAGGAAATTTAAATTAAGTTTCCTCTACTGCA 331
                       ************************************************************

consensus_10028#0      ACGAAGAAAACAAAGCACCAAATATGAATATGAATTAACTAAGGCATGTTTGTTTCAGCT 3040
consensus_10028#1      ACGAAGAAAACCAANCCCCAA-TATGAATATGAATTAACTAAAAA--------------- 375
                       *********** ** * **** ********************                  

consensus_10028#0      TATGATTATTATAAT 3055
consensus_10028#1      ---------------