These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2278 fasta sequence [AATCTTCTTCCCCTCAACCCGCTCCAAAATTCCCCCGCCTCCCACTCCAAAACCCAAAAAAATCCCGCGCGGCCGCGTGAAGCCGTGAATCTACTCCTCCCTTCCTCCGCGCCCGCGCGTCGCCATGAATCCGCAGGCGGAGGGCGATGCGGCGGCGGCGGCGGCGGTGCTGGGGGCGGACCCGGCGGGGCTGACGGCGCTGCTGGGGGACCTGACGTCGCCGGCGAACGAGGCGAGGTCGAGGGCGGAGGGGATGTTCCACGCGCTCAGGGCGTCCCACCCGGACGCGCTCGCGCTCCGCCTCGCGCACCTGCTGCTCTCCCCGGCGCACCCCTCCGCGCCCATGGCGGCCGTGCTCCTGCGCCGCCTCATCTCCCCGGGGTCGCAGGCGTTCGTCTACCCGGGGCTCTCCCCCGCCACGCAGTCCTCGCTCCGCGCGCTCCTCCTCTCCGCGGCGTCCGCGACGGGGCTCTCCAAGTCCATCTCGAAGAAGCTCTCCGACGCCGTCGCCGAGCTCGCGTCCTTCCTGCTGCCGTCCAACGCGTGGCCCGACCTCCTCACCTTCCTCTACAAGTCCATCGCCTCCCCATCCTCGCCTCCGGCGCTGCAGGAGTCGGCGCTCAACATCCTAGCCCGGCTGGCCTCCCATCTCGCCGCGGGCTTCCCCAACCTCCACGCCCTCCTCCTCTCCGCGCTCTCGCACCCGTCGTCCGCAGATGTCCGCGTCGCGGGGCTCAACGCCGCTATCAGCCTCATACAGTCTCTCCCCTCTGCCGCCGACCGTGACCAGTTTCAGGATCTCCTCCCAGCCATGATGCGCGCCCTCGCTGAATCGCTCAACTGTGGGAACGAGGGCTCTGCACAGGAGGCGCTTGAGATGATGATCGAGCTTGCAGGTGCAGAACCACGGTTTCTCCGCCGCCAGCTGCCTGACGTGGTTGGTTCTATGTTGCAAATTGCTGAAGCCCCTGGATTAGAGGATGGTACGCGACACCTTGCTGTCGAGTTTGTTGTTACCCTTGCTGAGGCAAGGGAGCGCGCGCCCGGGATGATGAGAAAGCTGCCACGGTATGTGGGCCGGCTATTTGCGGTGCTCATGACAATGCTGCTCGATGTCCAGGATGAACCTGCGTGGCATGCAGCGGTGTCGGAAGAAGAGGATGCTGGGGAGACTGGGAGCTATGTTTTCGCACAGGAATGTCTTGATCGGCTTGCGATTGCTGTTGGTGGGAATACGATTTTACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA-TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT-GAATGCAAC-TGACAAATCAAATA-GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC] [+] EMBL AK068293 [AATCTTCTTCCCCTCAACCCGCTCCAAAATTCCCCCGCCTCCCACTCCAAAACCCAAAAAAATCCCGCGCGGCCGCGTGAAGCCGTGAATCTACTCCTCCCTTCCTCCGCGCCCGCGCGTCGCCATGAATCCGCAGGCGGAGGGCGATGCGGCGGCGGCGGCGGCGGTGCTGGGGGCGGACCCGGCGGGGCTGACGGCGCTGCTGGGGGACCTGACGTCGCCGGCGAACGAGGCGAGGTCGAGGGCGGAGGGGATGTTCCACGCGCTCAGGGCGTCCCACCCGGACGCGCTCGCGCTCCGCCTCGCGCACCTGCTGCTCTCCCCGGCGCACCCCTCCGCGCCCATGGCGGCCGTGCTCCTGCGCCGCCTCATCTCCCCGGGGTCGCAGGCGTTCGTCTACCCGGGGCTCTCCCCCGCCACGCAGTCCTCGCTCCGCGCGCTCCTCCTCTCCGCGGCGTCCGCGACGGGGCTCTCCAAGTCCATCTCGAAGAAGCTCTCCGACGCCGTCGCCGAGCTCGCGTCCTTCCTGCTGCCGTCCAACGCGTGGCCCGACCTCCTCACCTTCCTCTACAAGTCCATCGCCTCCCCATCCTCGCCTCCGGCGCTGCAGGAGTCGGCGCTCAACATCCTAGCCCGGCTGGCCTCCCATCTCGCCGCGGGCTTCCCCAACCTCCACGCCCTCCTCCTCTCCGCGCTCTCGCACCCGTCGTCCGCAGATGTCCGCGTCGCGGGGCTCAACGCCGCTATCAGCCTCATACAGTCTCTCCCCTCTGCCGCCGACCGTGACCAGTTTCAGGATCTCCTCCCAGCCATGATGCGCGCCCTCGCTGAATCGCTCAACTGTGGGAACGAGGGCTCTGCACAGGAGGCGCTTGAGATGATGATCGAGCTTGCAGGTGCAGAACCACGGTTTCTCCGCCGCCAGCTGCCTGACGTGGTTGGTTCTATGTTGCAAATTGCTGAAGCCCCTGGATTAGAGGATGGTACGCGACACCTTGCTGTCGAGTTTGTTGTTACCCTTGCTGAGGCAAGGGAGCGCGCGCCCGGGATGATGAGAAAGCTGCCACGGTATGTGGGCCGGCTATTTGCGGTGCTCATGACAATGCTGCTCGATGTCCAGGATGAACCTGCGTGGCATGCAGCGGTGTCGGAAGAAGAGGATGCTGGGGAGACTGGGAGCTATGTTTTCGCACAGGAATGTCTTGATCGGCTTGCGATTGCTGTTGGTGGGAATACGATTTTACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC] [+] EMBL AK100005 [ CTTCTTCCCCTCAACCCGCTCCAAAATTCCCCCGCCTCCCACTCCAAAACCCAAAAAAATCCCGCGCGGCCGCGTGAAGCCGTGAATCTACTCCTCCCTTCCTCCGCGCCCGCGCGTCGCCATGAATCCGCAGGCGGAGGGCGATGCGGCGGCGGCGGCGGCGGTGCTGGGGGCGGACCCGGCGGGGCTGACGGCGCTGCTGGGGGACCTGACGTCGCCGGCGAACGAGGCGAGGTCGAGGGCGGAGGGGATGTTCCACGCGCTCAGGGCGTCCCACCCGGACGCGCTCGCGCTCCGCCTCGCGCACCTGCTGCTCTCCCCGGCGCACCCCTCCGCGCCCATGGCGGCCGTGCTCCTGCGCCGCCTCATCTCCCCGGGGTCGCAGGCGTTCGTCTACCCGGGGCTCTCCCCCGCCACGCAGTCCTCGCTCCGCGCGCTCCTCCTCTCCGCGGCGTCCGCGACGGGGCTCTCCAAGTCCATCTCGAAGAAGCTCTCCGACGCCGTCGCCGAGCTCGCGTCCTTCCTGCTGCCGTCCAACGCGTGGCCCGACCTCCTCACCTTCCTCTACAAGTCCATCGCCTCCCCATCCTCGCCTCCGGCGCTGCAGGAGTCGGCGCTCAACATCCTAGCCCGGCTGGCCTCCCATCTCGCCGCGGGCTTCCCCAACCTCCACGCCCTCCTCCTCTCCGCGCTCTCGCACCCGTCGTCCGCAGATGTCCGCGTCGCGGGGCTCAACGCCGCTATCAGCCTCATACAGTCTCTCCCCTCTGCCGCCGACCGTGACCAGTTTCAGGATCTCCTCCCAGCCATGATGCGCGCCCTCGCTGAATCGCTCAACTGTGGGAACGAGGGCTCTGCACAGGAGGCGCTTGAGATGATGATCGAGCTTGCAGGTGCAGAACCACGGTTTCTCCGCCGCCAGCTGCCTGACGTGGTTGGTTCTATGTTGCAAATTGCTGAAGCCCCTGGATTAGAGGATGGTACGCGACACCTTGCTGTCGAGTTTGTTGTTACCCTTGCTGAGGCAAGGGAGCGCGCGCCCGGGATGATGAGAAAGCTGCCACGGTATGTGGGCCGGCTATTTGCGGTGCTCATGACAATGCTGCTCGATGTCCAGGATGAACCTGCGTGGCATGCAGCGGTGTCGGAAGAAGAGGATGCTGGGGAGACTGGGAGCTATGTTTTCGCACAGGAATGTCTTGATCGGCTTGCGATTGCTGTTGGTGGGAATACGATTTTACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC] [+] EMBL CB634849 [ TACCTGTGGCAGCTGAGTTGCTCCCATCATTTTTTGCTTCTGAAGAGTGGAAGAGACGACATGCGGCACTGGTTACGATAGCGCAGATTGCAGAGGGCTGTGCTAGAGTAATGATTAAGAATCTGGAGCAGGTAGTTGGTATGGTGCTGAATTCCTTCCGGGATCCTCATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGTTGGAAAGCAAAAATTTAAGGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATG ] [+] EMBL CB675506 [ CTTCCGGGATCCTTATCCTCGGGTGAGATGGGCAGCTATCAATGCAATTGGGCAGCTTTCGACGGACCTGGGGCCTGAGTTGCAAAATAAACTGCACCATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCACGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCAT GAATGCAAC TGACAAATCAAATA GAATGTTGCGGGCCAAATCGATGGAATGCATTAGCTTAGTTGGTATGGCTGATGGAAAGCAAAAATTTAAAGATGATGCTAAGCAGGTGATGGAAGTTTTGATGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCACATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGCATTGGCATCCGAACCAGTCTGCTGGATGAAAA ] [+] EMBL OSS4004A [ CATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTGCGA TTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGG ACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTC ] [+] EMBL OSS2606A [ ATGTTGTCCTGCCTGCATTGGCTTCATCCATGGATGATTTCCAGAACCCGCGCGTACAGGCACACGCAGCTTCTG GANTTCTAAACTTCAGCGAAAACTGCAGGCCTGATATTTTGACACCATACTTGGATGGGATAGTTGGGAAACTACTGTCATTGCTTCAGACTGGAAACCAAATGGTGCAAGAAGGTGCTTTAACTGCTTTAGCATCAGCTGCAGATTCTTCTCAGGAACACTTCCAAAAATATTATGATGCAGTCATGCCATATCTCAAGTCTATACTCATGGAATGCAACTTGACAAATCAAATAGGAATGTTGCGGGCCAAATCGATGGGATGCATTAGCTTAGTTGGTATGGCTG ] [+] EMBL CB634251 [ TGACATTGCAAGGATCTCAGATGGAGGCTGATGACCCTATAACAAGTTACATGCTGCAAGCATGGGCGAGATTGTGTAAATGCCTTGGTCAGGACTTCTTACCATACATGAATGTTGTTATGCCTCCTCTGCTCCAGTCTGCTCAGCTTAAACCAGATGTGAGTGTCACATCTGCTGGGCCAGAAGATGAAAATGGTGAATCTGATGATGAGGGTGTTGAGACTATTACGCTAGGAGACAAGAGAATTGGCATCCGAACCAGTCTGCTGGAGGAAAAAGCAACGGCATGTAATATGCTATGTTGTTATGCTGATGAGCTCAAGGAAGGGTTTTTCCCATGGATTGATCAGGTTGCAACTACTCTGGTTCCTCTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||