cluster # 1004

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Oryza sativa
cluster # 1004 cluster # 1004 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1004#0 length = 523 sequences # 2

consensusID : consensus_1004#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 523
fasta sequence

                              [GGAGCTGAGCTCTTGTCGCCGCCGTTCCGGCCATCTCCCTCTTTCCCTTGGCTAGCTACCACCCTCCCCGAGTGGGCGTCGCCCGGGAACACGATATACTGCCGACGTCGCCGCCCTCCAGCCACCGGAGCGCCGTCGCCCCGCTTGCCTTCTCCTCTCTCTCTTCTCTCGGCTCTGTCTGGAACAGAGAAGAAGGAACGGGAAGAAGAAGAGGAAGAAGAAGAAAAGATNAAGAAGAAAGGCTGACAGCCTATGGTATNTCGAGAATCGGATAATCAGGTTGCCTATCTTGGATNTATTTGCGTTGGAGCAAGAGTCTAATTGGAGTTTTTGCCGAAGCTAGGAGTTCAATCACANTAAG-TAGTTCCC-TTTAACCTAATCTCAAGTCTAGTATAATAGATGGNTTAATCTATAGTAAACACAGAGTTGGATCATCGATACTTTTGCTGTATAGTTAGCACAAACTGGTAATATCTCATATTTATATTAAGATATCTCTTGGAATTTGACCAAAAAAAAAAAA]

[+] EMBL AW155512             [GGAGCTGAGCTCTTGTCGCCGCCGTTCCGGCCATCTCCCTCTTTCCCTTGGCTAGCTACCACCCTCCCCGAGTGGGCGTCGCCCGGGAACACGATATACTGCCGACGTCGCCGCCCTCCAGCCACCGGAGCGCCGTCGCCCCGCTTGCCTTCTCCTCTCTCTCTTCTCTCGGCTCTGTCTGGAACAGAGAAGAAGGAACGGGAAGAAGAAGAGGAAGAAGAAGAAAAGATNAAGAAGAAAGGCTGACAGCCTATGGTATNTCGAGAATCGGATAATCAGGTTGCCTATCTTGGATNTATTTGCGTTGGAGCAAGAGTCTAATTGGAGTTTTTGCCGAAGCTAGGAGTTCAATCACANTAAG TAGTTCCC TTTAACCTAATCTCAAGTCTAGTATAATAGATGGNTTAATCTATAGTAAACACAGAGTTGGATCATCGATACTTTTGCTGTATAGTTAGCACAAACTGGTAATATCTCATATTTATATTAAGATATCTCTTGGAATTTGACCAAAAAAAAAAAA]
[+] EMBL CF315030             [GGAGCTGAGCTTTTGTCGCCGCCGTTCCGGCCATCTCCCTCTTTCCCTTGGCTAGCTACCACCCTCCCCGAGTGGGCGTCGCCCGGGAACACGATATACTGCCGACGTCGCCGCCCTCCAGCCACCGGAGCGCCGTCGCCCCGCTTGCCTTCTCCTCTCTCTCTTCTCTCGGCTCTGTCTGGAACAGAGAAGAAGGAACGGGAAGAAGAAGAGGAAGAAGAAGAAAAGATAAAGAAGAAAGGCTGACAGCCTATGGTATTTCGAGAATCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGCAAGAGTCTAATTGGAGTTTTTGCCGAAGCTAGGAGTTCAATCACA TAAGTTAGTTCCCTTTTAACCTAATCT                                                                                                                                             ]




>consensus_1004#0
GGAGCTGAGCTCTTGTCGCCGCCGTTCCGGCCATCTCCCTCTTTCCCTTGGCTAGCTACC
ACCCTCCCCGAGTGGGCGTCGCCCGGGAACACGATATACTGCCGACGTCGCCGCCCTCCA
GCCACCGGAGCGCCGTCGCCCCGCTTGCCTTCTCCTCTCTCTCTTCTCTCGGCTCTGTCT
GGAACAGAGAAGAAGGAACGGGAAGAAGAAGAGGAAGAAGAAGAAAAGATNAAGAAGAAA
GGCTGACAGCCTATGGTATNTCGAGAATCGGATAATCAGGTTGCCTATCTTGGATNTATT
TGCGTTGGAGCAAGAGTCTAATTGGAGTTTTTGCCGAAGCTAGGAGTTCAATCACANTAA
GTAGTTCCCTTTAACCTAATCTCAAGTCTAGTATAATAGATGGNTTAATCTATAGTAAAC
ACAGAGTTGGATCATCGATACTTTTGCTGTATAGTTAGCACAAACTGGTAATATCTCATA
TTTATATTAAGATATCTCTTGGAATTTGACCAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case