cluster # 10049

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Oryza sativa
cluster # 10049 cluster # 10049 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10049#0 length = 579 sequences # 7
consensusID : consensus_10049#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 579
fasta sequence
                              [AAGGGGATTTGACTCGGTTCACGTGCTGAGAAACCTTTCATCGTAAGTGGCACAGGTGCTGGTCAAATGGTCACTCAAGATATCCGATAATGCTGGTTTTCATGAGGTTCACATCCAGAAAACAAAGTACCTCCTAAAGAGAATGTTCTCAGCTTTGGTAAGAAATCTTCAGTTGATGAAGCACCACCTGGGAAAGGTGTGTCAAGGTGGAGATCCGATGAGTCTAGTGAAGACGAAGATGATAAAAGAACAAGTGGGTATATGGAGAGTGGAGCTTCACTTGCTACTCGAAGACGAGCCAGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTAATCGCGCGCAGGGGACATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG-TC-TTGGGGGAAAAATTGTGG-CAACTATATTGCAAAATTTTGGTGTGCCATGGC-CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC]

[+] EMBL BI801510             [AAGGGGATTTGACTCGGTTCACGTGCTGAGAAACCTTTCATCGTAAGTGGCACAGGTGCTGGTCAAATGGTCACTCAAGATATCCGATAATGCTGGTTTTCATGAGGTTCACATCCAGAAAACAAAGTACCTCCTAAAGAGAATGTTCTCAGCTTTGGTAAGAAATCTTCAGTTGATGAAGCACCACCTGGGAAAGGTGTGTCAAGGTGGAGATCCGATGAGTCTAGTGAAGACGAAGATGATAAAAGAACAAGTGGGTATATGGAGAGTGGAGCTTCACTTGCTACTCGAAGACGAGCCAGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTAATCGCGCGCAGGGGACATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCC AATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCC ATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGC ATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATC AAATAGTTTGGCATTTAAAaaaa        ]
[+] EMBL AK060542             [                                                                                                                                                                                                                                                                                                          CCAGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTGATCGCGCGCAGGGGACATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAG                         ]
[-] EMBL BI306378             [                                                                                                                                                                                                                                                                                                                                                                                                CATAATACTTACCCCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TT TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CCCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCCCAAGTTt]
[-] EMBL BU673456             [                                                                                                                                                                                                                                                                                                                                                                                                 ATAATACTTACACCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAATTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC]
[-] EMBL CB967273             [                                                                                                                                                                                                                                                                                                                                                                                                 ATAATACTTACACCCCCAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCCATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATC AAATAGTTTGGCATTTAAAGCTCACAAGTTC]
[-] EMBL CB966096             [                                                                                                                                                                                                                                                                                                                                                                                                 ATAATACTTACACCCCCAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTT AAGCTCAC AGTTC]
[-] EMBL CB966439             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCCAATGTTCNTTGGGGGAAAAATTGTGGNCAACTATATTGCAAAATTTTGGTGTGCCATGGCNCGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC]




>consensus_10049#0
AAGGGGATTTGACTCGGTTCACGTGCTGAGAAACCTTTCATCGTAAGTGGCACAGGTGCT
GGTCAAATGGTCACTCAAGATATCCGATAATGCTGGTTTTCATGAGGTTCACATCCAGAA
AACAAAGTACCTCCTAAAGAGAATGTTCTCAGCTTTGGTAAGAAATCTTCAGTTGATGAA
GCACCACCTGGGAAAGGTGTGTCAAGGTGGAGATCCGATGAGTCTAGTGAAGACGAAGAT
GATAAAAGAACAAGTGGGTATATGGAGAGTGGAGCTTCACTTGCTACTCGAAGACGAGCC
AGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTAATCGCGCGCAGGGGA
CATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCCAAATGTAACTGCGATTTGT
TTGAGGAAAGGTGCAACTTACCCAATGTCTTGGGGGAAAAATTGTGGCAACTATATTGCA
AAATTTTGGTGTGCCATGGCCGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTG
TTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC
clustalw multiple alignements is not computed in this case