These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10049#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 579 fasta sequence [AAGGGGATTTGACTCGGTTCACGTGCTGAGAAACCTTTCATCGTAAGTGGCACAGGTGCTGGTCAAATGGTCACTCAAGATATCCGATAATGCTGGTTTTCATGAGGTTCACATCCAGAAAACAAAGTACCTCCTAAAGAGAATGTTCTCAGCTTTGGTAAGAAATCTTCAGTTGATGAAGCACCACCTGGGAAAGGTGTGTCAAGGTGGAGATCCGATGAGTCTAGTGAAGACGAAGATGATAAAAGAACAAGTGGGTATATGGAGAGTGGAGCTTCACTTGCTACTCGAAGACGAGCCAGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTAATCGCGCGCAGGGGACATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG-TC-TTGGGGGAAAAATTGTGG-CAACTATATTGCAAAATTTTGGTGTGCCATGGC-CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC] [+] EMBL BI801510 [AAGGGGATTTGACTCGGTTCACGTGCTGAGAAACCTTTCATCGTAAGTGGCACAGGTGCTGGTCAAATGGTCACTCAAGATATCCGATAATGCTGGTTTTCATGAGGTTCACATCCAGAAAACAAAGTACCTCCTAAAGAGAATGTTCTCAGCTTTGGTAAGAAATCTTCAGTTGATGAAGCACCACCTGGGAAAGGTGTGTCAAGGTGGAGATCCGATGAGTCTAGTGAAGACGAAGATGATAAAAGAACAAGTGGGTATATGGAGAGTGGAGCTTCACTTGCTACTCGAAGACGAGCCAGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTAATCGCGCGCAGGGGACATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCC AATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCC ATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGC ATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATC AAATAGTTTGGCATTTAAAaaaa ] [+] EMBL AK060542 [ CCAGATTTTCTAGAAGATGATATATTCCATCTGGTCCAGGTGTTTTGATCGCGCGCAGGGGACATCTTGTCGAATTCTTTTCCAGACATAATACTTACACCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAG ] [-] EMBL BI306378 [ CATAATACTTACCCCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TT TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CCCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCCCAAGTTt] [-] EMBL BU673456 [ ATAATACTTACACCCCAAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAATTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC] [-] EMBL CB967273 [ ATAATACTTACACCCCCAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCCATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATC AAATAGTTTGGCATTTAAAGCTCACAAGTTC] [-] EMBL CB966096 [ ATAATACTTACACCCCCAATGTAACTGCGATTTGTTTGAGGAAAGGTGCAACTTACCCAATG TC TTGGGGGAAAAATTGTGG CAACTATATTGCAAAATTTTGGTGTGCCATGGC CGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTT AAGCTCAC AGTTC] [-] EMBL CB966439 [ ACCCAATGTTCNTTGGGGGAAAAATTGTGGNCAACTATATTGCAAAATTTTGGTGTGCCATGGCNCGCAATGATGTATTGTAACTAAAGTAAATCGATATGTGTGTTGCATCAAAATAGTTTGGCATTTAAAGCTCACAAGTTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||