These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10058#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2540 fasta sequence [GCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGGCAAAGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATTTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATCCATGTGGCTCTCTCAAACAAAAGAATGAACTTTTCTGCATAGCCATGTGTTCACATGTAATAGGCAGCCACACAGGAAATCTAACAGAAGGTCAAACTTTCTTTAATACTCTCTCCAAATTCATATAGAAATTTATCCAATAGCTCAATTGAGCAAATCATATTCTGCAATTCCTTATGATTCAACTTGGCGAGCCACTTTTGTTTTGTATTTTTTTTTATATGGCAGATTCCACCAGAGTGTAAATCTGTTGTTCCAGAATTTCGCAATTTGTCCGGTACCATGCCCTTCTAGAATATCTGACGAGACCAAAATATGGAGGCATAACCACTTGCAATGAACTGAACTGAAACCATATGTAAAGTATGCTGCAGAGATCGATGAAGGATGATAGATAGATATATTCCATTTCTTGCTTTGAAGCAACAGAACAAAAAAACCCACACCCACACATCACTCCTCCCATTTCGATCAGAAATAGGTACTGCAAAATCTTCCTGCTTGCTTCAGAATCCAGAACTCTCCATTAATTTCTCGAAACAACTGCCTCTAGTACAGTACAGTGATAGAAAAACATAACAAAATGATAAAGAAAAAGAGAGCAGGATTCAGTCAATTGACAGCCACAGATAAAAGCAAGAAACATTTTTCTTTCACTCCTGCCGATTTTGTTTCTGAATTTCTGATGACAGTTAATTTTTGTGGTTAAGGAGGAGTCCAGAACATCAGATGCCACTAGAAAGAAGATCATTCAAGGCGATGAGTGGTAGAAAATCATCCACACAACTAAGGCCAGGGTAAAGCCAGCCGGCCTCTACTCTGAAGAGTCAAAAACCAAAAAAGATTCAGAGAAAGTTTCAGTGAGAGAGAGATGACAATTCAGAATTCACTGTGATGATGGAGGTGGTGGTGTTGGCGATGGCGACAAGCCTCCTCTCCACACCGCAAATAATCTCCACCATTATCGCCATCGCTAGCTAGATGCCGGTGGAGTTCGTGCTTGCAATTCGGTTTGTCACCACGCTCTTGCTGGGACGGACAGTGCAGGTCTCTTTCATGGCCATGGAAAATTTTTCTCCCCTTCCCTTTAATTCCTTTTCCTTTGGGAAATTGCAACCTGAATATATGATAGCTAGCGAGTTCAATCGATCGATCGATAGACGATGACGAGATGTGTGTTTTCACCAGAGGTTGTTTTGCTCCTGAAATATTCTTGCCTGTTCTTTTTTTTTTCTATGGTAGAGATTGTGACAAAAAATCAACAGTTCATCATCCATGGCATGTGAAATTTTTCAGTGAATATATATATAC] [+] EMBL AK119308 [GCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGGCAAAGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATTTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATCCATGTGGCTCTCTCAAACAAAAGAATGAACTTTTCTGCATAGCCATGTGTTCACATGTAATAGGCAGCCACACAGGAAATCTAACAGAAGGTCAAACTTTCTTTAATACTCTCTCCAAATTCATATAGAAATTTATCCAATAGCTCAATTGAGCAAATCATATTCTGCAATTCCTTATGATTCAACTTGGCGAGCCACTTTTGTTTTGTATTTTTTTTTATATGGCAGATTCCACCAGAGTGTAAATCTGTTGTTCCAGAATTTCGCAATTTGTCCGGTACCATGCCCTTCTAGAATATCTGACGAGACCAAAATATGGAGGCATAACCACTTGCAATGAACTGAACTGAAACCATATGTAAAGTATGCTGCAGAGATCGATGAAGGATGATAGATAGATATATTCCATTTCTTGCTTTGAAGCAACAGAACAAAAAAACCCACACCCACACATCACTCCTCCCATTTCGATCAGAAATAGGTACTGCAAAATCTTCCTGCTTGCTTCAGAATCCAGAACTCTCCATTAATTTCTCGAAACAACTGCCTCTAGTACAGTACAGTGATAGAAAAACATAACAAAATGATAAAGAAAAAGAGAGCAGGATTCAGTCAATTGACAGCCACAGATAAAAGCAAGAAACATTTTTCTTTCACTCCTGCCGATTTTGTTTCTGAATTTCTGATGACAGTTAATTTTTGTGGTTAAGGAGGAGTCCAGAACATCAGATGCCACTAGAAAGAAGATCATTCAAGGCGATGAGTGGTAGAAAATCATCCACACAACTAAGGCCAGGGTAAAGCCAGCCGGCCTCTACTCTGAAGAGTCAAAAACCAAAAAAGATTCAGAGAAAGTTTCAGTGAGAGAGAGATGACAATTCAGAATTCACTGTGATGATGGAGGTGGTGGTGTTGGCGATGGCGACAAGCCTCCTCTCCACACCGCAAATAATCTCCACCATTATCGCCATCGCTAGCTAGATGCCGGTGGAGTTCGTGCTTGCAATTCGGTTTGTCACCACGCTCTTGCTGGGACGGACAGTGCAGGTCTCTTTCATGGCCATGGAAAATTTTTCTCCCCTTCCCTTTAATTCCTTTTCCTTTGGGAAATTGCAACCTGAATATATGATAGCTAGCGAGTTCAATCGATCGATCGATAGACGATGACGAGATGTGTGTTTTCACCAGAGGTTGTTTTGCTCCTGAAATATTCTTGCCTGTTCTTTTTTTTTTCTATGGTAGAGATTGTGACAAAAAATCAACAGTTCATCATCCATGGCATGTGAAATTTTTCAGTGAATATATATATAC] consensusID : consensus_10058#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1280 fasta sequence [CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCNGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAA-TCT-CATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGG-GCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGA] [+] EMBL AK108556 [CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCT CATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGATCGGG GCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGCATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTTCAGGGTATGGAATTCTAAGAATCTTATGGA] [+] EMBL AU064207 [ AAAATATCTCGCNGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAA TCT CATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGG GAAGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACNTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGNAGCAACCATGTCGGT ] [+] EMBL C73534 [ AAAATATCTCGCNGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAA TCTNCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGG GGNGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTC ] [+] EMBL C73292 [ CTCGCNGTCGTTGCGCGCGGTA NTAGCTAGCTAGCTGCGCCATCGACGACGAA GCT CATCCATGGAGGCGGCGGCTGCCCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGCNCGGCGGCTGCGGGCGCTGCCGCCGCAGGTAAG ] consensusID : consensus_10058#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence [CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCAGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGCGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATT] [+] EMBL AK120934 [CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCAGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTTCTACTTCGCGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATT] consensusID : consensus_10058#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence [CTCCAACAATTGACAAAAACCAGGACTTGATAGTCACTGTATGGTCAGTGAGCTCAGACTCAAACATGACAGTCTAGATGGTTACTGTATTTTACACCAGCTGCAAAAATATGCGATCAATACGCATCTAATTAACAGCATAACCTCACATCTGACAAATGCCACAAAATTCAGGACTCATTGATTTTTGCCTCTCTGTTTTTTCTTTAACTTTTGTTGATGGATGTTCTTGCGCCTGTGTGCAAAATGCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTTGCCGGCGACGGCCAACCTGGAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAAGGGGGGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAAAAAA] [-] EMBL CA760538 [CTCCAACAATTGACAAAAACCAGGACTTGATAGTCACTGTATGGTCAGTGAGCTCAGACTCAAACATGACAGTCTAGATGGTTACTGTATTTTACACCAGCTGCAAAAATATGCGATCAATACGCATCTAATTAACAGCATAACCTCACATCTGACAAATGCCACAAAATTCAGGACTCATTGATTTTTGCCTCTCTGTTTTTTCTTTAACTTTTGTTGATGGATGTTCTTGCGCCTGTGTGCAAAATGCAGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTTGCCGGCGACGGCCAACCTGGAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAAGGGGGGGGGGGGGCTTACATATAGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10058#0 GCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCT 60 consensus_10058#1 ----CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCNGTCGTTGCGCGCGGTAGCT 56 consensus_10058#2 ----CTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGGTAGCT 56 consensus_10058#3 ----CTCCAA-CAATTGACAAAAACCAGGA----CTTGATAGTCACTGTATG-GTCAGTG 50 ***** ** * * ** * * * *** ** * * ** consensus_10058#0 AGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAG-GCGGCGGCTGCGCTG 119 consensus_10058#1 AGCTAGCTAGCTGCGCCATCGACGACGAA-TCTCATCCATGGAG-GCGGCGGCTGCGCTG 114 consensus_10058#2 AGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAG-GCGGCGGCTGCGCTG 115 consensus_10058#3 AGCT--CAGACTCAAACATGACAGTCTAGATGGTTACTGTATTTTACACCAGCTGCAAAA 108 **** * ** *** * * * * * * * * ***** consensus_10058#0 ACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGG-CGCCGC 178 consensus_10058#1 ACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGG-CGCCGC 173 consensus_10058#2 ACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGC--------- 166 consensus_10058#3 ATAT--GCGATCAATACGCA-TCTAATTAACAGCATAACCTCACATCTGACAAATGCCAC 165 * *** * * ** * * * *** * ** * consensus_10058#0 ACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCT 238 consensus_10058#1 ACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCT 233 consensus_10058#2 ------------------------AGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCGGCT 202 consensus_10058#3 AAAATTCAGGACT-------CATTGATTTTTGCCTCTCTGTTTTTTCTTTAACTTTTGTT 218 *** * * * * * * * consensus_10058#0 GCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTC 298 consensus_10058#1 GCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTC 293 consensus_10058#2 GCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGGCTC 262 consensus_10058#3 GATGGATGTTCTTGCGCCTGTGTGCAAAATGCAGTGCTCTGAT--GCTGTTCTTCTACTT 276 * ** * * *** *** ** * * * ** * ** **** ** * ** consensus_10058#0 GCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAG------------------ 340 consensus_10058#1 GCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTT 353 consensus_10058#2 GCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTTCTT 322 consensus_10058#3 CGTGTCCAAC-TGGGTGGTGCCT--------GAGTTAATCA------------------- 308 * ** ** ** * * ** ***** consensus_10058#0 -------------------------------------GCAAAG----------AGCCCAA 353 consensus_10058#1 CTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAA 413 consensus_10058#2 CTACTTCGCGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCCCAA 382 consensus_10058#3 --------------------------------------TGAAGGATTTGCAGGAGCCCAA 330 *** ******* consensus_10058#0 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGG 413 consensus_10058#1 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGG 473 consensus_10058#2 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGCCGG 442 consensus_10058#3 AAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTTGCCGG 390 ****************************************************** ***** consensus_10058#0 CGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 473 consensus_10058#1 CGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 533 consensus_10058#2 CGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 502 consensus_10058#3 CGACGGCCAACCTGGAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAAGAA 450 ************** ********************************************* consensus_10058#0 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 533 consensus_10058#1 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 593 consensus_10058#2 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 562 consensus_10058#3 GGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTATGTT 510 ************************************************************ consensus_10058#0 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 593 consensus_10058#1 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 653 consensus_10058#2 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 622 consensus_10058#3 ATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGTGCT 570 ************************************************************ consensus_10058#0 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAA------GGGGGGGGCTTACATAT 647 consensus_10058#1 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAA------GGGGGGGGCTTACATAT 707 consensus_10058#2 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAA------GGGGGGGGCTTACATAT 676 consensus_10058#3 AATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAAGGGGGGGGGGGGGCTTACATAT 630 ************************************* ***************** consensus_10058#0 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAT 707 consensus_10058#1 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAT 767 consensus_10058#2 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAT 736 consensus_10058#3 AGTATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCAA 690 *********************************************************** consensus_10058#0 TGCAT-TTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAG 766 consensus_10058#1 TGCATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAG 827 consensus_10058#2 T----------------------------------------------------------- 737 consensus_10058#3 AAAA-------------------------------------------------------- 694 consensus_10058#0 CTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGG 826 consensus_10058#1 CTAATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGG 887 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTG 886 consensus_10058#1 CTTGTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTG 947 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCA 946 consensus_10058#1 AACTCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCA 1007 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCA 1006 consensus_10058#1 CACACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCA 1067 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATT 1066 consensus_10058#1 AGGGCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATT 1127 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCG 1126 consensus_10058#1 CAACAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCG 1187 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTT 1186 consensus_10058#1 TTCGTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTT 1247 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TTTCAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATCCATGTGGCTCTCTCAAA 1246 consensus_10058#1 TTTCAGGGTATGGAATTCTAAGAATCTTATGGA--------------------------- 1280 consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CAAAAGAATGAACTTTTCTGCATAGCCATGTGTTCACATGTAATAGGCAGCCACACAGGA 1306 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AATCTAACAGAAGGTCAAACTTTCTTTAATACTCTCTCCAAATTCATATAGAAATTTATC 1366 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CAATAGCTCAATTGAGCAAATCATATTCTGCAATTCCTTATGATTCAACTTGGCGAGCCA 1426 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CTTTTGTTTTGTATTTTTTTTTATATGGCAGATTCCACCAGAGTGTAAATCTGTTGTTCC 1486 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AGAATTTCGCAATTTGTCCGGTACCATGCCCTTCTAGAATATCTGACGAGACCAAAATAT 1546 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 GGAGGCATAACCACTTGCAATGAACTGAACTGAAACCATATGTAAAGTATGCTGCAGAGA 1606 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TCGATGAAGGATGATAGATAGATATATTCCATTTCTTGCTTTGAAGCAACAGAACAAAAA 1666 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AACCCACACCCACACATCACTCCTCCCATTTCGATCAGAAATAGGTACTGCAAAATCTTC 1726 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CTGCTTGCTTCAGAATCCAGAACTCTCCATTAATTTCTCGAAACAACTGCCTCTAGTACA 1786 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 GTACAGTGATAGAAAAACATAACAAAATGATAAAGAAAAAGAGAGCAGGATTCAGTCAAT 1846 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TGACAGCCACAGATAAAAGCAAGAAACATTTTTCTTTCACTCCTGCCGATTTTGTTTCTG 1906 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AATTTCTGATGACAGTTAATTTTTGTGGTTAAGGAGGAGTCCAGAACATCAGATGCCACT 1966 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 AGAAAGAAGATCATTCAAGGCGATGAGTGGTAGAAAATCATCCACACAACTAAGGCCAGG 2026 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 GTAAAGCCAGCCGGCCTCTACTCTGAAGAGTCAAAAACCAAAAAAGATTCAGAGAAAGTT 2086 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TCAGTGAGAGAGAGATGACAATTCAGAATTCACTGTGATGATGGAGGTGGTGGTGTTGGC 2146 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 GATGGCGACAAGCCTCCTCTCCACACCGCAAATAATCTCCACCATTATCGCCATCGCTAG 2206 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CTAGATGCCGGTGGAGTTCGTGCTTGCAATTCGGTTTGTCACCACGCTCTTGCTGGGACG 2266 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 GACAGTGCAGGTCTCTTTCATGGCCATGGAAAATTTTTCTCCCCTTCCCTTTAATTCCTT 2326 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TTCCTTTGGGAAATTGCAACCTGAATATATGATAGCTAGCGAGTTCAATCGATCGATCGA 2386 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 TAGACGATGACGAGATGTGTGTTTTCACCAGAGGTTGTTTTGCTCCTGAAATATTCTTGC 2446 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 CTGTTCTTTTTTTTTTCTATGGTAGAGATTGTGACAAAAAATCAACAGTTCATCATCCAT 2506 consensus_10058#1 ------------------------------------------------------------ consensus_10058#2 ------------------------------------------------------------ consensus_10058#3 ------------------------------------------------------------ consensus_10058#0 GGCATGTGAAATTTTTCAGTGAATATATATATAC 2540 consensus_10058#1 ---------------------------------- consensus_10058#2 ---------------------------------- consensus_10058#3 ---------------------------------- 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Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||