These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10079#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2168 fasta sequence [AAATCGTCCAAATTTTGCCTGTTGATCTGGTTCTGTAGCGAGGATTTCGTCTGTGGCGTGCTTCACATGAAAGAGAGTAGAATTGGCTGAATTATGAGGATTACATGGCAAAAGGGAGAAAAATAATCTATTGCTTTGAAAATATTGATACTCTGATCTTTTACAAGTGAAGTAAACCTGCGTTGCAGAGTACAATTGTGTTCCTTAAGCATATTTCTTTTTGCCAAGCAAAGAAATTCGACATTTCTATCTTCATGGAAGATTGGCTCGATACTAGTTTCCTCTATTGAGTTTTATTTCTCCAAATTCCAAGGTTTCAGCTTCCTTGACGTGCTTAGTTCCATCTGCAGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATATGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGGTTGGTAGGTCACTTGAGTATCAGGTCCATTTTTCTAGAATGTAAAACCATCTGCTGTGGGTCCAACGCATGATAATCCTTCATTTCGATTATGCTCTTGGGAGAGTAAATAATAAATTAACGGATTAGCAGATGCAATTTAAATAAGATATTAGAATTATGCGCTGATGGAAAGATTCATAAGAACTGGTTTTTGACAAGATTAAGCTGATGACTTTTCATACACATATTACATATATGTTCCTTAATTTGACCATGTGCGTATTTTTCTAACATGCAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCT-ATTAGCTAAGCTTAGCAAAAGAGG-AAAAAAAAGGCCTTTTTTGCCAAAAAAAAA] [+] EMBL AK072416 [AAATCGTCCAAATTTTGCCTGTTGATCTGGTTCTGTAGCGAGGATTTCGTCTGTGGCGTGCTTCACATGAAAGAGAGTAGAATTGGCTGAATTATGAGGATTACATGGCAAAAGGGAGAAAAATAATCTATTGCTTTGAAAATATTGATACTCTGATCTTTTACAAGTGAAGTAAACCTGCGTTGCAGAGTACAATTGTGTTCCTTAAGCATATTTCTTTTTGCCAAGCAAAGAAATTCGACATTTCTATCTTCATGGAAGATTGGCTCGATACTAGTTTCCTCTATTGAGTTTTATTTCTCCAAATTCCAAGGTTTCAGCTTCCTTGACGTGCTTAGTTCCATCTGCAGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATATGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGGTTGGTAGGTCACTTGAGTATCAGGTCCATTTTTCTAGAATGTAAAACCATCTGCTGTGGGTCCAACGCATGATAATCCTTCATTTCGATTATGCTCTTGGGAGAGTAAATAATAAATTAACGGATTAGCAGATGCAATTTAAATAAGATATTAGAATTATGCGCTGATGGAAAGATTCATAAGAACTGGTTTTTGACAAGATTAAGCTGATGACTTTTCATACACATATTACATATATGTTCCTTAATTTGACCATGTGCGTATTTTTCTAACATGCAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCT ATTAGCTAAGCTTAGCAAAAGAGG AAAAAAAAGGCCTT ] [-] EMBL CF327520 [ ATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTCATTAGCTAAGCTTAGCAAAAGAGGCAAAAAAAAGGCCCTTTTTGCCAAAAAAAAA] consensusID : consensus_10079#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1915 fasta sequence [ACTTTGGCGGCTTTTCGAGGGGGGGAGGGGAGGAGGGGCAATACCCCGGCCGGTTTTACTCCTGCCGATCGAGTCGAGGGGAGCGCGGGTCCGCCGCTTTTCGGCCTCCCTCCCATTGGAGCGAGCAAAGCTGGGCGGCACCATCTCTCTTTAAAGAAGAACCAAACAACAACACTAGCACCACCACCACCACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGCGCTCACCGTCACACCCCGCTCGCCCGCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGATCGATCGCTCCAGGCGATCGAGTCGCACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCGCTCCCTGCAGATTAGATCGGTTTCAACCCGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATCTGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTTGCCCG] [+] EMBL CB674870 [ACTTTGGCGGCTTTTCGAGGGGGGGAGGGGAGGAGGGGCAATACCCCGGCCGGTTTTACTCCTGCCGATCGAGTCGAGGGGAGCGCGGGTCCGCCGCTTTTCGGCCTCCCTCCCATTGGAGCGAGCAAAGCTGGGCGGCACCATCTCTCTTTAAAGAAGAACCAAACAACAACACTAGCACCACCACCACCACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGCGCTCACCGTCACACCCCGCTCGCCCGCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGATCGATCGCTCCAGGCGATCGAGTCGCACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCGCTCCCTGCAGATTAGATCGGTTTCAACCCGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTT ] [+] EMBL AK119597 [ ACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGCGCTCACCGTCACACCCCGCTCGCCCCCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGATCGATCGCTCCAGGCGATCGAGTCGCACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCGCTCCCTGCAGATTAGATCGGTTTCAACCCGGGAACAATATATTGTGGAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGAGCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGTGCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGATGGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGTTGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGACTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATCTGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTT ] [+] EMBL CF327519 [ GTTCCAGTGGTATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGTCTCCACCACTTCGTCCAATGCGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCCCCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGGTGGCCTCCAGAAATATGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGACTGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCGGAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGAGCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGG ] [-] EMBL CB674871 [ AGTTCAGACGGACACAAGAGTTCTTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAACTCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAAATGAGCAAAAGAGGAAAAAAAAGGCCTTTTTGCCCG] consensusID : consensus_10079#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 729 fasta sequence [TCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGNTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTT] [+] EMBL CA767142 [TCAGACGGACACAAGAGTTCCTTCGTTTGTGTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTACAAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACAATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACCAAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTGCTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGGAGGAACCAAGAGGATGATGGTGATGACTGATGAGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAACCAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGACAAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCTTGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCTCAGTATAGTGAATAGAGGATGTAGAATAGGAAGNTAGTTAATAATAAGTACTAGCTAGCTAGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10079#1 ACTTTGGCGGCTTTTCGAGGGGGGGAGGGGAGGAGGGGCAATACCCCGGCCGGTTTTACT 60 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 ------------------------------------------AAATCGTCCAAATTT-TG 17 consensus_10079#1 CCTGCCGATCGAGTCGAGGGGAGCGCGGGTCCGCCGCTTTTCGGCCTCCCTCCCATTGGA 120 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 CCTGTTGATCTGGTTCTGT--AGCGAGGATTT--CG-TCTGTGGCGTGCTTCACATGAAA 72 consensus_10079#1 GCGAGCAAAGCTGGGCGG--CACCATCTCTCTTTAAAGAAGAACCAAACAACAA-CACTA 177 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GAGAGTAGAATTGGCTGAATTATGAGGATTACATGGCAAAAGGGAGAAAAATAATCTATT 132 consensus_10079#1 GCACCACCACCACCACCACCTCCACCACCATCAGTGTCCATCAACCACCCACCGC-GCTC 236 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GCTTTGAAAATATTGATACTCTGATCTTTTACAA-GTGAAGTAAACCTGCGTTGCAGAGT 191 consensus_10079#1 ACCGTCACACCCCGCTCGCCCGCGCGCGCGCGCGCGCACACACACGAGGGACCGATCGAT 296 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 ACAATTGTGTTCCTTAAGCATATTTCTTTTTGC-----CAAGCAAAGAAATTCGACATTT 246 consensus_10079#1 CGATCGCTCCAGGCGATCGAGTCG-CACTGAAGCTGCTTGAAGAGCTTGGCGATCTCTCG 355 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 CTATCTTCATGGAAGATTGGCTCGATACTAGTTTCCTCTATTGAGTTTTATTTCTCCAAA 306 consensus_10079#1 CTCC----CTGCAGATTA--------GATCGGTTTCAAC--CCGGGAACAATATATTGTG 401 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 TTCCAAGGTTTCAGCTTCCTTGACGTGCTTAGTTCCATCTGCAGGGAACAATATATTGTG 366 consensus_10079#1 GAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGA 461 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GAAGTACACAAACTTTTTGAGTATCGTTACAAAGAGTCCATGCTTGGATGAGTACCTGGA 426 consensus_10079#1 GCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGT 521 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GCAGTAGGTACCAAAGTCGTCCATTCTGCATTGTGGAGTTGCTCTGGATCAACTTGGAGT 486 consensus_10079#1 GCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGAT 581 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GCGTCCTTCGAAACTGGAAATACCAAATTCCGTTCTAGATAATTTGCTGGGCGCGCAGAT 546 consensus_10079#1 GGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGT 641 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GGCAGATGATCCTAGTCTAGACTTTGGTGAATTTCCTCAGCCATTCTGCAGCCAGCAAGT 606 consensus_10079#1 TGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGA 701 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 TGTTTCATTTCAGCCAAGCGTGACAACTAGTGGGTCAGGAGGCATGCCAGTGTACCTGGA 666 consensus_10079#1 CTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGT 761 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 CTGTTCCAGTGGGATGGACAGCAACACGGTGATGTTGAGCACCACACCTTCTGTGGTTGT 726 consensus_10079#1 CTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCC 821 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 CTCCACCACTTCGTCCAATACGGTTGCTGATCCCGGGCAGAACCTCAAATATGGAGGGCC 786 consensus_10079#1 CCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATC 881 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 CCTGGCAGCTGATTGGTCACGTCTTGAGCTCGATGTGCTGAAAGATGGCCTCCAGAAATA 846 consensus_10079#1 TGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGAC 941 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 TGGAAATGAACAAGGCATCATGAAGTATATAAAGATAGCAGCTTCATTACCAAGCAAGAC 906 consensus_10079#1 TGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCG 1001 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 TGTGAGAGATGTCGCAATGAAGTGTCAGTGGCTAGGGAAAAGAGAAAATTCAAGGCGGCG 966 consensus_10079#1 GAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGA 1061 consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 GAAGTCTGAAGACCATCACACTGGAAGAAAGATGAAAGAAAGAAAGGCTAAAATGGCCGA 1026 consensus_10079#1 GCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGT 1121 consensus_10079#2 ------------------------------TCAGACGGACACAAGAGTTCCTTCGTTTGT 30 consensus_10079#0 GCCTTCCTTATGGGGTACCAATCATCCAGTTCAGACGGACACAAGAGTTCCTTCGTTTGT 1086 ****************************** consensus_10079#1 GTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAG------------------- 1162 consensus_10079#2 GTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAG------------------- 71 consensus_10079#0 GTCACATAATGCCATTCAAAACAACCAAATTCTAACTGGAGGTTGGTAGGTCACTTGAGT 1146 ***************************************** consensus_10079#1 ------------------------------------------------------------ consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 ATCAGGTCCATTTTTCTAGAATGTAAAACCATCTGCTGTGGGTCCAACGCATGATAATCC 1206 consensus_10079#1 ------------------------------------------------------------ consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 TTCATTTCGATTATGCTCTTGGGAGAGTAAATAATAAATTAACGGATTAGCAGATGCAAT 1266 consensus_10079#1 ------------------------------------------------------------ consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 TTAAATAAGATATTAGAATTATGCGCTGATGGAAAGATTCATAAGAACTGGTTTTTGACA 1326 consensus_10079#1 ------------------------------------------------------------ consensus_10079#2 ------------------------------------------------------------ consensus_10079#0 AGATTAAGCTGATGACTTTTCATACACATATTACATATATGTTCCTTAATTTGACCATGT 1386 consensus_10079#1 ---------------------CCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTAC 1201 consensus_10079#2 ---------------------CCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTAC 110 consensus_10079#0 GCGTATTTTTCTAACATGCAGCCACTGAAATAGATCGTGCAATGCAGCAATTACTAGTAC 1446 *************************************** consensus_10079#1 AAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACA 1261 consensus_10079#2 AAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACA 170 consensus_10079#0 AAAATGATCGACTTCTTGATCAGATTGAAGCAAATATGCTAGCATGTCAGCCGCAAAACA 1506 ************************************************************ consensus_10079#1 ATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACC 1321 consensus_10079#2 ATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACC 230 consensus_10079#0 ATATTGAACTCTTCCATCGGACAAGAAGGAACATCAATGGTCTTCTGCAAACCATGAACC 1566 ************************************************************ consensus_10079#1 AAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTG 1381 consensus_10079#2 AAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTG 290 consensus_10079#0 AAATGCCTGGGATAATGAGTAAGATGCCTCCGTTGCCCGTCTCGGTGAATGAAAATCTTG 1626 ************************************************************ consensus_10079#1 CTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGG 1441 consensus_10079#2 CTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGG 350 consensus_10079#0 CTAGCTTCGTACTTCCTGGTCTTACAGTGCCACAATTTCTCGGAGGCAGCCAATTGAAGG 1686 ************************************************************ consensus_10079#1 AGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAAC 1501 consensus_10079#2 AGGAACCAAGAGGATG-------------------------------------------- 366 consensus_10079#0 AGGAACCAAGAGGATGGTAAGTCACTGCCAACAGGTTGCACATGAAGCAAACGTTTAAAC 1746 **************** consensus_10079#1 TCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATG 1561 consensus_10079#2 --------------------------------------------ATGGTGATGACTGATG 382 consensus_10079#0 TCCATCACAAACTTAGTGAAATATTTGGGAATTACTGCTGTCAGATGGTGATGACTGATG 1806 **************** consensus_10079#1 AGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAAC 1621 consensus_10079#2 AGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAAC 442 consensus_10079#0 AGTAGAACTACCAGGGATCCTGCTTTCTCTATCAGAAGGCGAAGGGGAGGTAACTGTAAC 1866 ************************************************************ consensus_10079#1 CAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGAC 1681 consensus_10079#2 CAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGAC 502 consensus_10079#0 CAATCTGCTGCTCGGCCTCCACTGACATGGGTTGAACGTACGCCCCAGCTGGCCAGCGAC 1926 ************************************************************ consensus_10079#1 AAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCT 1741 consensus_10079#2 AAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCT 562 consensus_10079#0 AAGCCTGTAAAACTGGTGGCTGAACAGTAATATTTCAGGAAACTTCAGTTTTGCTCGTCT 1986 ************************************************************ consensus_10079#1 TGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCT 1801 consensus_10079#2 TGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCT 622 consensus_10079#0 TGGTGCACCTGCACATATTGAATTTTTTTTTCTTTTCGATTTCTCATCCTGTCAGTTTCT 2046 ************************************************************ consensus_10079#1 CAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCT 1861 consensus_10079#2 CAGTATAGTGAATAGAGGATGTAGAATAGGAAGNTAGTTAATAATAAGTACTAGCTAGCT 682 consensus_10079#0 CAGTATAGTGAATAGAGGATGTAGAATAGGAAGTTAGTTAATAATAAGTACTAGCTAGCT 2106 ********************************* ************************** consensus_10079#1 AGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTTGCCCG------ 1915 consensus_10079#2 AGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTT------------- 729 consensus_10079#0 AGCTAGCTATTAGCTAAGCTTAGCAAAAGAGGAAAAAAAAGGCCTTTTTTGCCAAAAAAA 2166 *********************************************** consensus_10079#1 -- consensus_10079#2 -- consensus_10079#0 AA 2168 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||