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Oryza sativa
cluster # 10098 cluster # 10098       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10098#0 length = 1759 sequences # 5  
consensus_10098#1 length = 463 sequences # 1  
consensus_10098#2 length = 274 sequences # 1  

consensusID : consensus_10098#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1759
fasta sequence
                              [CCCTGCCTGCAAAGCTGCAACCGTCCAAAGCACGTGCCCCGCACCTGACTCCCCCCTCCCCCCACTTCCGTTTCCTCCGCCCCACGCCACCGCCGCCGACAAGCTCGACCCACCCGCGGGCGGCCGCCGGAGATGGCGACGGAGGGGCTGGTGCCCATCACGCGGGCATACCTCGCGCGCTACTACGACAAGTACCCGCTGCCCCCGCTCCCCGACGCCGCCACGGCCCTCGCCGACCGCCTCCGCGCCATCTCCGCGGCCCTCGCCCTCGCCGCCGCCGCCCCCATCACGCCAGATGAGGAGCTCTTGGAAAAAGAAGCTAATGGGATACCTGCTCACAAAATTGATGAAAACTTGTGGAAAAATAGAGAACAAATGGAAGAAATTTTGCTCTTGCTTAACAAATCTCGTCGTCCTGTTGCACTTCAACAGAGGTCCACGGCAGAGGACACTGAGACATTTATTATACTTGATGATGTTGAAACTAAATTGAAGGACATGCTGAAGAAGTTAGAACAGTTTCAAATAAAAAATGCTGATAATGTTTTCAATACAGTTATGACCTACATGCCACAAGATTTCCGTGGTACACTAATCAGGCAACAGCGAGAACGCTCTGAGAGAAATAAGCAAGCTGAGGTAGATGCTTTAGTTAATGCTGGTGGAAGCATTCGTGATCGATATGCATTGCTGTGGAAACAGCAAATGGACAGGCGAGTGCAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCTGTTGGACTTCATTCGGCAAATTAA-CGATGATAATGGACCTATGGAAGAGCAAA-GAGAA-CGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCAATTCGATTGTATCTACACGTGTCA-TTAGCACGATATGGGCAGAGGAAAATAGAAAAGGATGACATTGCTGTGTTGCAGCAGGCTGTGGCTATCTACACCGAGGAATTTGAGAAGTTCACTGAATTCATAGGCGAAGTTTTTGTGAATGCCCCATTCTTCATATCTGCTGAGGATGCAGGTGCTGAATCAAGGAACAGCGACGACTACAAAGAAACCATTATTCCAGCAGGAAAGACACATGAGGTTATTCTTAGTGTTGAGGCTGTCAACTCATACATTGCATGGGACTTCTCCTTGCAACAAGGGGCCCTCAACATGGTCTTGGATATTGGTTTTCATGTGGAGTACATAAGCCCATCAGGCCAGAAAACTTTAATACTTCCCTACCGACGATATGAAGCTGACCAAGGTAACTTCTGCACTGTCTCTGCCGGATCATACAAGCTTGTTTGGGACAACTCATATTCGTCATTCTTCAAAAAGAGCCTCCGGTACAAGGTGGACGCC-GTGCC-GCCGGTTGTCGCGCC-GGCAGAGCCCGCCGCGGAACCCTGATGGAGCC-TGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGAATAGCCGCGCAGATATACCACAGGC-C-CTCTTCACACAGATGTTGTAACACAATTCTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACAACACACACAACAGCTGCTCACTGGCGTCCATGTGAGCTGTAAGATATATATATATATATATATATATATATATGTACCTTTGTGTGCTCGTGTTTACGGAAA-CTCGCTAATGATATGAAACTGACTGCTTCCATTCACTATAAGGGA]

[+] EMBL AK071384             [CCCTGCCTGCAAAGCTGCAACCGTCCAAAGCACGTGCCCCGCACCTGACTCCCCCCTCCCCCCACTTCCGTTTCCTCCGCCCCACGCCACCGCCGCCGACAAGCTCGACCCACCCGCGGGCGGCCGCCGGAGATGGCGACGGAGGGGCTGGTGCCCATCACGCGGGCATACCTCGCGCGCTACTACGACAAGTACCCGCTGCCCCCGCTCCCCGACGCCGCCACGGCCCTCGCCGACCGCCTCCGCGCCATCTCCGCGGCCCTCGCCCTCGCCGCCGCCGCCCCCATCACGCCAGATGAGGAGCTCTTGGAAAAAGAAGCTAATGGGATACCTGCTCACAAAATTGATGAAAACTTGTGGAAAAATAGAGAACAAATGGAAGAAATTTTGCTCTTGCTTAACAAATCTCGTCGTCCTGTTGCACTTCAACAGAGGTCCACGGCAGAGGACACTGAGACATTTATTATACTTGATGATGTTGAAACTAAATTGAAGGACATGCTGAAGAAGTTAGAACAGTTTCAAATAAAAAATGCTGATAATGTTTTCAATACAGTTATGACCTACATGCCACAAGATTTCCGTGGTACACTAATCAGGCAACAGCGAGAACGCTCTGAGAGAAATAAGCAAGCTGAGGTAGATGCTTTAGTTAATGCTGGTGGAAGCATTCGTGATCGATATGCATTGCTGTGGAAACAGCAAATGGACAGGCGAGTGCAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCTGTTGGACTTCATTCGGCAAATTAA CGATGATAATGGACCTATGGAAGAGCAAA GAGAA CGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCAATTCGATTGTATCTACACGTGTCA TTAGCACGATATGGGCAGAGGAAAATAGAAAAGGATGACATTGCTGTGTTGCAGCAGGCTGTGGCTATCTACACCGAGGAATTTGAGAAGTTCACTGAATTCATAGGCGAAGTTTTTGTGAATGCCCCATTCTTCATATCTGCTGAGGATGCAGGTGCTGAATCAAGGAACAGCGACGACTACAAAGAAACCATTATTCCAGCAGGAAAGACACATGAGGTTATTCTTAGTGTTGAGGCTGTCAACTCATACATTGCATGGGACTTCTCCTTGCAACAAGGGGCCCTCAACATGGTCTTGGATATTGGTTTTCATGTGGAGTACATAAGCCCATCAGGCCAGAAAACTTTAATACTTCCCTACCGACGATATGAAGCTGACCAAGGTAACTTCTGCACTGTCTCTGCCGGATCATACAAGCTTGTTTGGGACAACTCATATTCGTCATTCTTCAAAAAGAGCCTCCGGTACAAGGTGGACGCC GTGCC GCCGGTTGTCGCGCC GGCAGAGCCCGCCGCGGAACCCTGATGGAGCC TGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGAATAGCCGCGCAGATATACCACAGGC C CTCTTCACACAGATGTTGTAACACAATTCTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACAACACACACAACAGCTGCTCACTGGCGTCCATGTGAGCTGTAAGATATATATATATATATATATATATATATATGTACCTTTGTGTGCTCGTGTTTACGGAAA CTCGCTAATGATATGAAACTGACTGCTTCC               ]
[+] EMBL D43313               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACACTAATCAGGCAACAGCGAGAACGCTCTGAGAGAAATAAGCAAGCTGAGGTAGATGCTTTAGTTAATGCTGGTGGAAGCATTCGTGATCGATATGCATTGCTGTGGAAACAGCAAATGGACAGGCGAGTGCAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCTGTTGGACTTCATTCGGCAAATTAACCGATGATAATGGACCTATGGAAGAGCAAANGAGAACCGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTNCAATTCGCTTGTATCTACACGTGTCATTTAGCACGATATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB677008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGGCATTGCTGTGTTGCAGCAGGCTGTGGCTATCTACACCGAGGAATTTGAGAAGTTCACTGAATTCATAGGCGAAGTTTTTGTGAATGCCCCATTCTTCATATCTGCTGAGGATGCAGGTGCTGAATCAAGGAACAGCGACGACTACAAAGAAACCATTATTCCAGCAGGAAAGACACATGAGGTTATTCTTAGTGTTGAGGCTGTCAACTCATACATTGCATGGGACTTCTCCTTGCAACAAGGGGCCCTCAACATGGTCTTGGATATTGGTTTTCATGTGGAGTACATAAGCCCATCAGGCCAGAAAACTTTAATACTTCCCTACCGACGATATGAAGCTGACCAAGGTAACTTCTGCACTGTCTCTGCCGGATCATACAAGCTTGTTTGGGACAACTCATATTCGTCATTCTTCAAAAAGAGCCTCCGGTACAAGGTGGACGCC GTGCC GCCGGTTGTCGCGCC GGCAGAGCCCGCCGCGGAACCCTGATGGAGCC TGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGAATAGCCGCGCAGATATACCACAGGC C CTCTTCACACAGATGTTGTAACACAATTCTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACAACACACACAACAGCTGCTCACTGGCGTCGATGTGAGCTGTAAGATATATATATATATATATATATATATATATGTACCTTTGTGTGCTCGTGTTTCTGGAAAGGGCGCTAATGATATGAAACTGACTGCTTCCATTCACTATAAGGGA]
[+] EMBL BI802959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATACTTCCCTACCGACGATATGAAGCTGACCAAGGTAACTTCTGCACTGTCTCTGCCGGATCATACAAGCTTGTTTGGGACAACTCATATTCGTCATTCTTCAAAAAGAGCCTCCGGTACAAGGTGGACGCCAGTGCCAGCCGGTTGTCGCGCCAGGCAGAGCCCACCGCGGAACCCTGATGGAGCCATGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGAATA CCGCGCAGATATACCACAGGCACACTCTTCACACAGATGTCCT ACACAATTCTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACAACACACACAACAGCTGCTCACTGGTGTCCATGTGAGCTGTAAG    ATATATATATATATATATATATATATGCACCCTTGTGTGCTCGTGTTTAaaaaa                                               ]
[+] EMBL CF197335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAACCCTGATGGAGCC TGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGAATAGCCGCGCAGATATACCACAGGC C CTCTTCACACAGATGTTGTAACACAATTCTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACAACACACACAACAGCTGCTCACTGGTGTCCATGTGAGCTGTAAG    ATATATATATATATATATATATATATGTACCTTTGTGTGCTaaaaaaaa                                                    ]


>consensus_10098#0 CCCTGCCTGCAAAGCTGCAACCGTCCAAAGCACGTGCCCCGCACCTGACTCCCCCCTCCC CCCACTTCCGTTTCCTCCGCCCCACGCCACCGCCGCCGACAAGCTCGACCCACCCGCGGG CGGCCGCCGGAGATGGCGACGGAGGGGCTGGTGCCCATCACGCGGGCATACCTCGCGCGC TACTACGACAAGTACCCGCTGCCCCCGCTCCCCGACGCCGCCACGGCCCTCGCCGACCGC CTCCGCGCCATCTCCGCGGCCCTCGCCCTCGCCGCCGCCGCCCCCATCACGCCAGATGAG GAGCTCTTGGAAAAAGAAGCTAATGGGATACCTGCTCACAAAATTGATGAAAACTTGTGG AAAAATAGAGAACAAATGGAAGAAATTTTGCTCTTGCTTAACAAATCTCGTCGTCCTGTT GCACTTCAACAGAGGTCCACGGCAGAGGACACTGAGACATTTATTATACTTGATGATGTT GAAACTAAATTGAAGGACATGCTGAAGAAGTTAGAACAGTTTCAAATAAAAAATGCTGAT AATGTTTTCAATACAGTTATGACCTACATGCCACAAGATTTCCGTGGTACACTAATCAGG CAACAGCGAGAACGCTCTGAGAGAAATAAGCAAGCTGAGGTAGATGCTTTAGTTAATGCT GGTGGAAGCATTCGTGATCGATATGCATTGCTGTGGAAACAGCAAATGGACAGGCGAGTG CAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTC GGTGTCCCTCAGGTTCTGTTGGACTTCATTCGGCAAATTAACGATGATAATGGACCTATG GAAGAGCAAAGAGAACGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCA ATTCGATTGTATCTACACGTGTCATTAGCACGATATGGGCAGAGGAAAATAGAAAAGGAT GACATTGCTGTGTTGCAGCAGGCTGTGGCTATCTACACCGAGGAATTTGAGAAGTTCACT GAATTCATAGGCGAAGTTTTTGTGAATGCCCCATTCTTCATATCTGCTGAGGATGCAGGT GCTGAATCAAGGAACAGCGACGACTACAAAGAAACCATTATTCCAGCAGGAAAGACACAT GAGGTTATTCTTAGTGTTGAGGCTGTCAACTCATACATTGCATGGGACTTCTCCTTGCAA CAAGGGGCCCTCAACATGGTCTTGGATATTGGTTTTCATGTGGAGTACATAAGCCCATCA GGCCAGAAAACTTTAATACTTCCCTACCGACGATATGAAGCTGACCAAGGTAACTTCTGC ACTGTCTCTGCCGGATCATACAAGCTTGTTTGGGACAACTCATATTCGTCATTCTTCAAA AAGAGCCTCCGGTACAAGGTGGACGCCGTGCCGCCGGTTGTCGCGCCGGCAGAGCCCGCC GCGGAACCCTGATGGAGCCTGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGA ATAGCCGCGCAGATATACCACAGGCCCTCTTCACACAGATGTTGTAACACAATTCTTTTT AGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACAACACACAC AACAGCTGCTCACTGGCGTCCATGTGAGCTGTAAGATATATATATATATATATATATATA TATATGTACCTTTGTGTGCTCGTGTTTACGGAAACTCGCTAATGATATGAAACTGACTGC TTCCATTCACTATAAGGGA



consensusID : consensus_10098#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 463
fasta sequence
                              [GTAAATCTTTATATCATTTTTCATTTTGTGCTGTAGGCGAGTGCAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCTGTTGGACTTCATTCTTTTTATTAACGATGATAATGGGTATATATGCCTGCGTATTTTCTTTTATCAAACATAATTTCGCAAATAGTACCATGTATACTAGATTTGTGGTTTACGGAGTAATCAGTAATGGCATGAATAGTTGATTTGTTTTTCAATTGAAATTTCTATTCAGACCTATGGAAGAGCAAAGAGAACGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCAATTCGATTGTATCTACACGTGTCATTAGCACGATATGGGCAGAGGAAAATGTGAGAACTTCTATTTGGTAGAATTCTCCTTGTCTTTTACTAACTATTATATCA]

[+] EMBL CF305953             [GTAAATCTTTATATCATTTTTCATTTTGTGCTGTAGGCGAGTGCAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCTGTTGGACTTCATTCTTTTTATTAACGATGATAATGGGTATATATGCCTGCGTATTTTCTTTTATCAAACATAATTTCGCAAATAGTACCATGTATACTAGATTTGTGGTTTACGGAGTAATCAGTAATGGCATGAATAGTTGATTTGTTTTTCAATTGAAATTTCTATTCAGACCTATGGAAGAGCAAAGAGAACGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCAATTCGATTGTATCTACACGTGTCATTAGCACGATATGGGCAGAGGAAAATGTGAGAACTTCTATTTGGTAGAATTCTCCTTGTCTTTTACTAACTATTATATCA]


>consensus_10098#1 GTAAATCTTTATATCATTTTTCATTTTGTGCTGTAGGCGAGTGCAATTGGCACAACTTGG TTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCT GTTGGACTTCATTCTTTTTATTAACGATGATAATGGGTATATATGCCTGCGTATTTTCTT TTATCAAACATAATTTCGCAAATAGTACCATGTATACTAGATTTGTGGTTTACGGAGTAA TCAGTAATGGCATGAATAGTTGATTTGTTTTTCAATTGAAATTTCTATTCAGACCTATGG AAGAGCAAAGAGAACGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCAA TTCGATTGTATCTACACGTGTCATTAGCACGATATGGGCAGAGGAAAATGTGAGAACTTC TATTTGGTAGAATTCTCCTTGTCTTTTACTAACTATTATATCA



consensusID : consensus_10098#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 274
fasta sequence
                              [CGCGCAGAGTAGTACCACAGGCCCTCTTGTCACACAGAGTGTTGTAACACAGTTCNTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACATACACACACACAGCTGCTCACTGGTGTCCAGTGTGAGCTGTAAGATATATATATATATATATATATATATGTACCTTTGTGTGCTCGTGTTTACGGAAACTCGCTAATGATAAGAAACTGACTGCTTCCATTCAAATTGACAGTGATAGACTTTGAAAAAA]

[+] EMBL BI807116             [CGCGCAGAGTAGTACCACAGGCCCTCTTGTCACACAGAGTGTTGTAACACAGTTCNTTTTTAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACATACACACACACAGCTGCTCACTGGTGTCCAGTGTGAGCTGTAAGATATATATATATATATATATATATATGTACCTTTGTGTGCTCGTGTTTACGGAAACTCGCTAATGATAAGAAACTGACTGCTTCCATTCAAATTGACAGTGATAGACTTTGAAAAAA]


>consensus_10098#2 CGCGCAGAGTAGTACCACAGGCCCTCTTGTCACACAGAGTGTTGTAACACAGTTCNTTTT TAGCAAGCCGCATGCGACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACATACACAC ACACAGCTGCTCACTGGTGTCCAGTGTGAGCTGTAAGATATATATATATATATATATATA TATGTACCTTTGTGTGCTCGTGTTTACGGAAACTCGCTAATGATAAGAAACTGACTGCTT CCATTCAAATTGACAGTGATAGACTTTGAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10098#0      CCCTGCCTGCAAAGCTGCAACCGTCCAAAGCACGTGCCCCGCACCTGACTCCCCCCTCCC 60
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      CCCACTTCCGTTTCCTCCGCCCCACGCCACCGCCGCCGACAAGCTCGACCCACCCGCGGG 120
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      CGGCCGCCGGAGATGGCGACGGAGGGGCTGGTGCCCATCACGCGGGCATACCTCGCGCGC 180
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      TACTACGACAAGTACCCGCTGCCCCCGCTCCCCGACGCCGCCACGGCCCTCGCCGACCGC 240
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      CTCCGCGCCATCTCCGCGGCCCTCGCCCTCGCCGCCGCCGCCCCCATCACGCCAGATGAG 300
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GAGCTCTTGGAAAAAGAAGCTAATGGGATACCTGCTCACAAAATTGATGAAAACTTGTGG 360
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      AAAAATAGAGAACAAATGGAAGAAATTTTGCTCTTGCTTAACAAATCTCGTCGTCCTGTT 420
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GCACTTCAACAGAGGTCCACGGCAGAGGACACTGAGACATTTATTATACTTGATGATGTT 480
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GAAACTAAATTGAAGGACATGCTGAAGAAGTTAGAACAGTTTCAAATAAAAAATGCTGAT 540
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      AATGTTTTCAATACAGTTATGACCTACATGCCACAAGATTTCCGTGGTACACTAATCAGG 600
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      CAACAGCGAGAACGCTCTGAGAGAAATAAGCAAGCTGAGGTAGATGCTTTAGTTAATGCT 660
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GGTGGAAGCATTCGTGATCGATATGCATTGCTGTGGAAACAGCAAATGGACAGGCGAGTG 720
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      CAATTGGCACAACTTGGTTCTGCAACAGGTGTATATAAGACGCTTGTTAGGTACTTGGTC 780
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GGTGTCCCTCAGGTTCTGTTGGACTTCATTCGGCAAATTAACGATGATAATGGACCTATG 840
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GAAGAGCAAAGAGAACGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCA 900
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      ATTCGATTGTATCTACACGTGTCATTAGCACGATATGGGCAGAGGAAAATAGAAAAGGAT 960
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GACATTGCTGTGTTGCAGCAGGCTGTGGCTATCTACACCGAGGAATTTGAGAAGTTCACT 1020
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GAATTCATAGGCGAAGTTTTTGTGAATGCCCCATTCTTCATATCTGCTGAGGATGCAGGT 1080
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GCTGAATCAAGGAACAGCGACGACTACAAAGAAACCATTATTCCAGCAGGAAAGACACAT 1140
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GAGGTTATTCTTAGTGTTGAGGCTGTCAACTCATACATTGCATGGGACTTCTCCTTGCAA 1200
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      CAAGGGGCCCTCAACATGGTCTTGGATATTGGTTTTCATGTGGAGTACATAAGCCCATCA 1260
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GGCCAGAAAACTTTAATACTTCCCTACCGACGATATGAAGCTGACCAAGGTAACTTCTGC 1320
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      ACTGTCTCTGCCGGATCATACAAGCTTGTTTGGGACAACTCATATTCGTCATTCTTCAAA 1380
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      AAGAGCCTCCGGTACAAGGTGGACGCCGTGCCGCCGGTTGTCGCGCCGGCAGAGCCCGCC 1440
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      ------------------------------------------------------------
                                                                                   

consensus_10098#0      GCGGAACCCTGATGGAGCCTGCTTCTCTACGAAGCGACGAGGGCCATTCCCTGCGACGGA 1500
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      -------------------------------------------------GTAAATCTTTA 11
                                                                                   

consensus_10098#0      ATAGCCGCGCAGAT--ATACCACAGGCCCTCTT--CACACAGA-TGTTGTAACACAATTC 1555
consensus_10098#2      -----CGCGCAGAGTAGTACCACAGGCCCTCTTGTCACACAGAGTGTTGTAACACAGTTC 55
consensus_10098#1      TATCATTTTTCATTTTGTGCTGTAGGCGAGTGCAATTGGCACAACTTGGTTCTGCAACAG 71
                                        * *   ****            ** *   * **    **    

consensus_10098#0      TTTTT-AGCAAGCCGCATGC--GACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACA 1612
consensus_10098#2      NTTTTTAGCAAGCCGCATGC--GACAGCGGCGCTGTAATCCTCAGGGTTCAGACGATACA 113
consensus_10098#1      GTGTATA-TAAGACGCTTGTTAGGTACTTGGTCGGTGTCCCTCAGGTTCTGTTGGACTTC 130
                        * *  *  *** *** **   *  *   *  * **   ******* *      **    

consensus_10098#0      -ACACACACAACAGC--TGCTCACTGGCGTCCA----TGTGAGCTGTAAGATAT-ATATA 1664
consensus_10098#2      TACACACACA-CAGC--TGCTCACTGGTGTCCAG---TGTGAGCTGTAAGATAT-ATATA 166
consensus_10098#1      ATTCTTTTTATTAACGATGATAATGGGTATATATGCCTGCGTATTTTCTTTTATCAAACA 190
                                *  * *  ** * *  **  *  *    ** *   * *    *** * * *

consensus_10098#0      TATATATATATATATATATATGTACCTTTGTGTGCTCGTG-TTTACGGAA-ACTCGCTAA 1722
consensus_10098#2      TATATATATATATAT----ATGTACCTTTGTGTGCTCGTG-TTTACGGAA-ACTCGCTAA 220
consensus_10098#1      TAATTTCGCAAATAGTACCATGTATACTAG---ATTTGTGGTTTACGGAGTAATCAGTAA 247
                       **  *    * ***     *****   * *     * *** ********  * **  ***

consensus_10098#0      TGATATGAA--ACTGACTG---CTTCCATTCACTATAAGGGA------------------ 1759
consensus_10098#2      TGATAAGAA--ACTGACTG---CTTCCATTCAAATTGACAGTGATAGACTTTGAAAAAA- 274
consensus_10098#1      TGGCATGAATAGTTGATTTGTTTTTCAATTGAAATTTCTATTCA-GACCTATGGAAGAGC 306
                       **  * ***    *** *     *** *** *   *                        

consensus_10098#0      ------------------------------------------------------------
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      AAAGAGAACGTTATGGGCCAGCACTTTACACTCTTACGAAACTGGTGCTTGCAATTCGAT 366
                                                                                   

consensus_10098#0      ------------------------------------------------------------
consensus_10098#2      ------------------------------------------------------------
consensus_10098#1      TGTATCTACACGTGTCATTAGCACGATATGGGCAGAGGAAAATGTGAGAACTTCTATTTG 426
                                                                                   

consensus_10098#0      -------------------------------------
consensus_10098#2      -------------------------------------
consensus_10098#1      GTAGAATTCTCCTTGTCTTTTACTAACTATTATATCA 463
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)