These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10117#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 557 fasta sequence [TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC-ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC-CAGCACACC-GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG---TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG-ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC-TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTCTGGCGCTTCCGAA] [+] EMBL CF297687 [TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAAAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTCTGGCGCTTCCGA ] [-] EMBL AU070754 [TTTTTTTAAAAGTCAAAACTGCATACGCATTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCG ] [-] EMBL CF297688 [ TTTGTCTGATGAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTCTGGCGCTTCCGAA] [+] EMBL BU673506 [ GAATATTATTCAGATCAGAGACCAATATTTGTATACGCTCAAATCAAATATTCGAACTATGTTGAAACATG ATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGTGGAGGACGCGGTGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGA ] [+] EMBL BU673022 [ ATATTATTCAGATCAGAGACCAATA TTGTATACGCTCAAATCAAATATTCGAAC ATGTTGAAACATG ATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGGGAATATCGCGTTCCCTCGTCGAAGTTCTCTCAGAACACCGGGGCG GCTCTTCTCCTTCAAAACCCTGAGATCGGGGTGGTCGGCGATGATGTGGAGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGTGGAGGACGCGGCGGCGGCGTGCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTCTTTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAG ] [-] EMBL CA998232 [ TGAAACATGCATATGAATTGAAATTCCGGCAAAACGGTGGCATATGGCAATCAATCCCACCAGCCAACAACACGGTCTTAGTACTTGGGCGGGTCGGAGAAGAAGCTGTTGATGCCGGGCATGATCTCGGGGCGCTTCCCGTCGATGAACTTCCTGAAGCCGTGCTGCGAGTAGCGCTTCCCCTCGTCGAAGTTCTC CAGCACACC GGCCGCCCTCTTCTCCTTCAACACCCTGACTTCGGGGTTGCCGG TGATGTTGCGGACGAGCTGGCCGACGCAGATGGAGACGGCG ACGCCGGTGGCGAGGAAGAGCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGACGCGGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGA ] [-] EMBL C26848 [ CACC GGCCGCNCTCTTCTCCTTCAANACCCTNACTTCGGGGTTGCCGG TGATGTTNCGGACGAGCTGGCCGANGCAGATGGAGACGGCGNAC CCGGTGGCGAGGAAGANCGGGTACACCTCGGGGCGGATCCACCTCTTCCAGGCGGCGGAGGANGCAGCGGCGGCGGCCATGGCTGGCTTGCTTTGCTGCTGCTTTTCTTC TTGCGGCGCAAGAAGGCGAGGCGAGGCTAGGAGAGACCTTTGGCGtcntntn ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||