These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10119#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3065 fasta sequence [TTCCTCCTCCGCGCCACCGCCACCTCCACCTCCACCGCCGCCTCCGCCGCCGCCGCCTCGCTCCTCCTCCGATGCCACCACCCGCTCTCCCCGCCGCCTAGAACCCTAGCCCTCGCCCTCCCCGCTCGCCCTCCCCCCGCCCTCCTCCTCCCCTCCCGCTTCCGCCTCTCCTCCTCCGCGTCCTCCTCCTCCCGACGCCGCGCGACCGGTGCCGCATCCGCATCCGCGGGCGCGGGCGCGGGGAAGGGGAAGGGGAAGGGGGGCAAGTCCAGCGGGGGGAAGGCGGCGGCCGCGGCGGCGGCGGGAGGAGCGGCCATGTCGGCCTCGGCGGGTGGGGGTGGAGGTGGGGGAGGGAAGCGGACGGTGGCGGATGTGCTGATGGGGAACGCGCGGGACGCGGCGAGGAAGGCGAAGAAGGGGGCGGCGCAGTCGCCGAAGAAGCTGAAGACGCAGCCCCAGCCCGCCGCGGAGGCGGATGGCGGCGCGGTGGCGAAGCCGGAGGAGAAGCCGCATTCGCCGGTGAAGCCCAAGCGGTCGTCCTCGCCGACTAAGTCCAACTCGCCAGGTGAGGGGAAGAGGTCCGAATCGGTGGCTGCTGGCGCGAAACCGGAGGCGAAGGAGAAGCCCTCGCCGAAGAAGCCTAAAACCCTAGGTGCCAAATCCGACACCAAGTCCTCCGCGGAAGGCGTTGAGAAGGAGAAGAGGAGGTCACCATCTCCGACGAAGGCAAAAGCGCTAGCTTCTGAATCCCAGGACATAAAGAAGCCCTCCTCACCTAAGAAGACCAAAGCCTTGGATGCCCCCAAGTCTGAGGAAAAGGACACCACCCTCGAGCTCAAGAAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGGGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTATTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTGGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTTGGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGTCTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAAGATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGATGTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGTGAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACACGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTTGATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCAT-GGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTAAAAAAA] [+] EMBL AK120278 [TTCCTCCTCCGCGCCACCGCCACCTCCACCTCCACCGCCGCCTCCGCCGCCGCCGCCTCGCTCCTCCTCCGATGCCACCACCCGCTCTCCCCGCCGCCTAGAACCCTAGCCCTCGCCCTCCCCGCTCGCCCTCCCCCCGCCCTCCTCCTCCCCTCCCGCTTCCGCCTCTCCTCCTCCGCGTCCTCCTCCTCCCGACGCCGCGCGACCGGTGCCGCATCCGCATCCGCGGGCGCGGGCGCGGGGAAGGGGAAGGGGAAGGGGGGCAAGTCCAGCGGGGGGAAGGCGGCGGCCGCGGCGGCGGCGGGAGGAGCGGCCATGTCGGCCTCGGCGGGTGGGGGTGGAGGTGGGGGAGGGAAGCGGACGGTGGCGGATGTGCTGATGGGGAACGCGCGGGACGCGGCGAGGAAGGCGAAGAAGGGGGCGGCGCAGTCGCCGAAGAAGCTGAAGACGCAGCCCCAGCCCGCCGCGGAGGCGGATGGCGGCGCGGTGGCGAAGCCGGAGGAGAAGCCGCATTCGCCGGTGAAGCCCAAGCGGTCGTCCTCGCCGACTAAGTCCAACTCGCCAGGTGAGGGGAAGAGGTCCGAATCGGTGGCTGCTGGCGCGAAACCGGAGGCGAAGGAGAAGCCCTCGCCGAAGAAGCCTAAAACCCTAGGTGCCAAATCCGACACCAAGTCCTCCGCGGAAGGCGTTGAGAAGGAGAAGAGGAGGTCACCATCTCCGACGAAGGCAAAAGCGCTAGCTTCTGAATCCCAGGACATAAAGAAGCCCTCCTCACCTAAGAAGACCAAAGCCTTGGATGCCCCCAAGTCTGAGGAAAAGGACACCACCCTCGAGCTCAAGAAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGGGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTATTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTGGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTTGGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGTCTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAAGATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGATGTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGTGAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACACGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTTGATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCAT GGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT ] [+] EMBL CB634345 [ ACACCACCCTCGAGCTCAAGAAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTGCCGTTCCTGTTCCTCGCTCGAGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTTATCACGGAGATCCTATCGAATGTCTTCCGCACGGTGATTGCCACAACACCAGAGGATCTCCTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTTGGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAGCATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGGTTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAATTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATCAAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAGTCGAAGATGAGGATTGGGTTAGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCTGTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCAAAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATTCTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGGTCCTG ] [+] EMBL AU030175 [ TGAAAGTTCGACGAGAGCATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGGAGAGGGAAACGTACAGGTGTATATGGGTCATTCCTCCTGGCATGTTACGATGAGCAGACCGANGAATACCCAACAATCTG ] [+] EMBL AU095025 [ ATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTAAAAAAA] consensusID : consensus_10119#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 959 fasta sequence [AATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATANNTTTGCTGACACNNTGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATTTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTTTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCGCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTTAAAAAAAATCCAT] [+] EMBL AI978542 [AATTACATCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAAGGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATANNTTTGCTGACACNNTGG ] [-] EMBL CB634346 [ tgGAACAATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTGCCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTGGCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTTTCTGAGCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACCAAAGGCATACTATAGGTTTGCTGACACAATGGACCCAGATGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCCTGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCCTCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATTTGAGCAAGTTGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTTTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCGCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTTTAAAAAAAATCCAT] consensusID : consensus_10119#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 709 fasta sequence [GAGCTTGTTATCTGAAAGCACGTGCCGTTTGAAGGATTTATTTATTCATCCTTCTACAAACAGCTGATATACTACTTGTTTTTTTGCTTTTCACAATACCAAGATAACATTCCTGAATGCAACTGTCCCCTATACCATTCTTGACCTCTAAAAGAACACCTCAGTTCCTTAGCGTTCGGAATACGCCAAGTTAGTAATAATAAGCAAAATTACCAAATTTAGTGCTTAACAAATGGAATTACCGCTTAACTTACCCTTCCCCTGAGAGACCAATACCGCTTGACTTGATAAAAACTTCTATTTTTATTTATTCTTGAGGTTCACTTGTTTAACAGATTACACCTAGTTAGCTTTCTGTTTGGGTTGATGTAATATTGTTCCTAACCAGTCATGTTCGGTGTCACAGTTTTTTGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT] [+] EMBL AK058561 [GAGCTTGTTATCTGAAAGCACGTGCCGTTTGAAGGATTTATTTATTCATCCTTCTACAAACAGCTGATATACTACTTGTTTTTTTGCTTTTCACAATACCAAGATAACATTCCTGAATGCAACTGTCCCCTATACCATTCTTGACCTCTAAAAGAACACCTCAGTTCCTTAGCGTTCGGAATACGCCAAGTTAGTAATAATAAGCAAAATTACCAAATTTAGTGCTTAACAAATGGAATTACCGCTTAACTTACCCTTCCCCTGAGAGACCAATACCGCTTGACTTGATAAAAACTTCTATTTTTATTTATTCTTGAGGTTCACTTGTTTAACAGATTACACCTAGTTAGCTTTCTGTTTGGGTTGATGTAATATTGTTCCTAACCAGTCATGTTCGGTGTCACAGTTTTTTGATGAGGATGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACATGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTCACACGCTAAATCCAAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGTGGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACCCTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10119#0 TTCCTCCTCCGCGCCACCGCCACCTCCACCTCCACCGCCGCCTCCGCCGCCGCCGCCTCG 60 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CTCCTCCTCCGATGCCACCACCCGCTCTCCCCGCCGCCTAGAACCCTAGCCCTCGCCCTC 120 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CCCGCTCGCCCTCCCCCCGCCCTCCTCCTCCCCTCCCGCTTCCGCCTCTCCTCCTCCGCG 180 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TCCTCCTCCTCCCGACGCCGCGCGACCGGTGCCGCATCCGCATCCGCGGGCGCGGGCGCG 240 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GGGAAGGGGAAGGGGAAGGGGGGCAAGTCCAGCGGGGGGAAGGCGGCGGCCGCGGCGGCG 300 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GCGGGAGGAGCGGCCATGTCGGCCTCGGCGGGTGGGGGTGGAGGTGGGGGAGGGAAGCGG 360 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 ACGGTGGCGGATGTGCTGATGGGGAACGCGCGGGACGCGGCGAGGAAGGCGAAGAAGGGG 420 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GCGGCGCAGTCGCCGAAGAAGCTGAAGACGCAGCCCCAGCCCGCCGCGGAGGCGGATGGC 480 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GGCGCGGTGGCGAAGCCGGAGGAGAAGCCGCATTCGCCGGTGAAGCCCAAGCGGTCGTCC 540 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TCGCCGACTAAGTCCAACTCGCCAGGTGAGGGGAAGAGGTCCGAATCGGTGGCTGCTGGC 600 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GCGAAACCGGAGGCGAAGGAGAAGCCCTCGCCGAAGAAGCCTAAAACCCTAGGTGCCAAA 660 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TCCGACACCAAGTCCTCCGCGGAAGGCGTTGAGAAGGAGAAGAGGAGGTCACCATCTCCG 720 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 ACGAAGGCAAAAGCGCTAGCTTCTGAATCCCAGGACATAAAGAAGCCCTCCTCACCTAAG 780 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 AAGACCAAAGCCTTGGATGCCCCCAAGTCTGAGGAAAAGGACACCACCCTCGAGCTCAAG 840 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 AAGAAGGGCAGTGAATTCAATCCCATGGCTGCTGCTTATTGGAGCCCCGAGGAGCCCGTG 900 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CCGTTCCTGTTCCTCGCTCGGGCACTTGACCTCATCTCTAATGAGTCTGGAAGGATTGTT 960 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 ATCACGGAGATCCTATCGAATGTATTCCGCACGGTGATTGCCACAACACCAGAGGATCTC 1020 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CTCGCGACAGTATACCTCTCAGCCAACCGGATTGCGCCGCCTCATGAAGGGACTGAACTT 1080 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GGAATTGGGGATGCATCAATTATCCGTGCACTTGCGGAGGCATACGGCCGCAGAGAGGAG 1140 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CATGTCAAGAAGAACCTAAAGGAGTTGGGCGATTTGGGGCTTGTTGCAAAAGCAAGCAGG 1200 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TTGTCACAGAAGATGATGTACAAACCGAAACCACTGACGATCTCACATGTACTTGCAAAA 1260 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TTCCGGACAATTGCAAAGGAATCAGGCAAAGATAGTCAAGATAAGAAAAGAAATCATATC 1320 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 AAAGGACTTCTCGTTGCCGCAACTGACTGTGAACCTCAATACATTACACGACTACTTCAG 1380 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TCGAAGATGAGGATTGGGTTGGCAGAAAAAACCGTCCAGATGGCTCTTGGGCAAGCTGCT 1440 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GTGTATTCTGAAAAACATTCTCCACCGTCAAAAATCCAATCCCCTTTTGAAGAGGCTGCA 1500 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 AAAATAATTAAACAAGTATATTCAGTTCTTCCAATATACGATAAAATTGTCCCAGCTATT 1560 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CTAGAAGTTGGTGTTTGGAAACTTCCAGAGATATGCAGTTTTTCTATTGGTGTTCCTGTT 1620 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GGTCCTATGTTGGCAAAAGCAACAAAGTCTGTCTCAGAGATCATAGACAAATTTCAGGGT 1680 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CTTGAGTACACTTGTGAGTACAAGTATGATGGTGAACGGGCTCAGATACATTGCCTGGAA 1740 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GATGGATCAGTAGAGATCTATAGTCGTAATGCTGAGAGGAACACTGGGAAGTATCCTGAT 1800 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GTTGTTGATGCGGTTTCTAGATTCCGGAAGCCTACAGTCAAATCATTTGTCTTGGACTGT 1860 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GAAATTGTTGCTTATGACCGTGAAAAGAAGAAAATATTACCTTTTCAGATACTTAGCACA 1920 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CGGGCCCGCAAGGGTGTTACCATAAGTGATATCAAAGTGTCAGTCTGTACTTTTGGCTTT 1980 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GATATTCTTTACATCAATGGCAAGCCTCTTCTCCAGGAACAACTGAAAGTTCGACGAGAG 2040 consensus_10119#1 ------------------------------------------------------------ consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CATCTTTACAACTCCTTTGAGGAAGTACCAGGTGTTTTTCAATTGGCAACTTCAATTACA 2100 consensus_10119#1 -----------------------------------------------------AATTACA 7 consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 TCAAATGACCTCGAGGAGATACAAAAATTTCTTGACACAGCTGTCAACTCCAGTTGTGAA 2160 consensus_10119#1 TCAAATGACCTCGAGGAGATACAAAAATTTCTCGACACAGCTGTCAACTCCAGTTGTGAA 67 consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 GGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAAC 2220 consensus_10119#1 GGGTTGATTATCAAGACATTGGATAAGGATGCTACATATGAGCCAGCAAAACGATCGAAC 127 consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 AATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTG 2280 consensus_10119#1 AATTGGTTGAAATTGAAGAAAGACTACATGGACAGCATTGGAGACTCTTTGGATTTGGTG 187 consensus_10119#2 ------------------------------------------------------------ consensus_10119#0 CCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTG 2340 consensus_10119#1 CCAATTGCTGCCTTTCATGGGAGAGGAAAACGTACAGGTGTATATGGATCATTCCTCCTG 247 consensus_10119#2 -------GAGCTTGTTATCTGAAAGCACGTGCCGTTTGAAGGATTTATTTATTCATCCTT 53 ** * * ** ** ** * * * * **** **** consensus_10119#0 GCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTT 2400 consensus_10119#1 GCATGTTACGATGAGCAGAACGAAGAATACCAAACAATCTGCAACATAGGCACTGGATTT 307 consensus_10119#2 CTACAA-ACAGCTGATATACTACTTGTTTTTTTGCTTTTCACAATACCAAGATAACATTC 112 * ** * * * * * *** * * *** consensus_10119#0 TCTGA-GCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACC 2459 consensus_10119#1 TCTGA-GCAACAGCTTGAGGAGCGTTCTGTGAGCCTTCGAACTAAAGCAATACCAAAACC 366 consensus_10119#2 CTGAATGCAACTGTCCCCTATACCATTCTTGA-CCTCTAAA--AGAACACC-TCAGTTCC 168 * ***** * * * *** *** ** * * ** ** ** consensus_10119#0 AAAGTTGTGCTTTCATTTTTTTTAGGCATACTATAGGTTTGCTGACACAATGGACCCAGA 2519 consensus_10119#1 AAAG---------------------GCATACTATANNTTTGCTGACACNNTGGACCCAGA 405 consensus_10119#2 TTAGCG---------------TTCGGAATACGCCAAGTTAGT---AATAATAAGCAAAAT 210 ** * **** * ** * * * * * consensus_10119#0 TGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCC 2579 consensus_10119#1 TGTGTGGTTTGAGCCTTCAGAGGTTTGGGAGGTGAAAGCTGCTGATTTGAGCATTAGTCC 465 consensus_10119#2 TACCAAATTTAGTGCTTAACAAAT----GGAATTACCGCT--TAACTTA---------CC 255 * *** *** * * * * * * *** * * ** ** consensus_10119#0 TGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCC 2639 consensus_10119#1 TGTGCATCGTGCTGCCAATGGTATAGTTGATCCGAACAAGGGCATCTCCCTAAGATTTCC 525 consensus_10119#2 CTTCCCCTGAGAGACCAATACCGC--TTGACTTGA-TAAAAACTTCTATT-----TTTAT 307 * * * * ***** **** ** ** * *** *** consensus_10119#0 TCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATCTGAGCAAGT 2699 consensus_10119#1 TCGCTTGTTACGTGTTCGTGATGATAAAAATCCAGAACAGGCAACCACATTTGAGCAAGT 585 consensus_10119#2 TTATTCTTGAGGTTCACTTGTT--TAACAGATTACACCTAGTTAGC-TTTCTGTTTGGGT 364 * * * * ** * ** * *** * * * * * * * * ** ** consensus_10119#0 TGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGA 2759 consensus_10119#1 TGCTGATATGTACCGTGCACAAAAGATATACCATGCGAACAACAATAACGATGATGAGGA 645 consensus_10119#2 TGATGTAA--TATTGTTCCTAACCAGT-CATGTTCGGTGTCACAGTTTTT-TGATGAGGA 420 ** ** * ** ** * ** * * * * *** * ********* consensus_10119#0 TGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACA 2819 consensus_10119#1 TGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTTTGATTGGTTGACA 705 consensus_10119#2 TGATGACTAGACTATGAGGATTTCGTTTCGTCTTGGCCTCGACGTTCTGATTGGTTGACA 480 ********************************************** ************* consensus_10119#0 TGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTT-CACACGCTAAATCC 2878 consensus_10119#1 TGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTTTCACACGCTAAATCC 765 consensus_10119#2 TGTAGCGTTTTAGGTGCGAGATTCGTAATGTGATTCTTTTTTTTT-CACACGCTAAATCC 539 ********************************************* ************** consensus_10119#0 AAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGT 2938 consensus_10119#1 AAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCGCGTGT 825 consensus_10119#2 AAACTGGTGGTGCGGTGTTGCACAGTAGGGAATTGAAGAGCATGGCCGCGTCGCTCGTGT 599 ****************************************************** ***** consensus_10119#0 GGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACC 2998 consensus_10119#1 GGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACC 885 consensus_10119#2 GGCGCTAATACAAACCTTCCTGTTAACCTGAGATGTACATACATGATAACATGAGTGACC 659 ************************************************************ consensus_10119#0 CTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTT 3058 consensus_10119#1 CTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTTGATTTTTTTT 945 consensus_10119#2 CTTCGATTGGCAAGGGCACTGTTTGATTTTTATCTAGACATGCACTGTTT---------- 709 ************************************************** consensus_10119#0 AAAAAAA------- 3065 consensus_10119#1 TAAAAAAAATCCAT 959 consensus_10119#2 -------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||