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Oryza sativa
cluster # 10124 cluster # 10124       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10124#0 length = 1259 sequences # 5  
consensus_10124#1 length = 860 sequences # 1  
consensus_10124#2 length = 823 sequences # 1  

consensusID : consensus_10124#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1259
fasta sequence
                              [CCCGCCAGCTACGTCCCCGCCCGCGCCGGGCCGCCGCTCGCCGTTCTCCCCCCAGCCAGCTCCCCCGCGCCTTCCTCGCCGCGCGCGGCCTCCTCGCCCCGCCGCGCCGCCGCGTCCCCGGCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCCTAGCCACCATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCCGCGGCGGCTGCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGGTACCCTCGCGCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGGCGCCCACGCATGGCCGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCGTCGCGCCCCGAGCAGCCTCCCCGAGGAGTCCCTATAGCTCAGCAAGCACAGCCCAAGGTCATTCCACTACCAGCTGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCGACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTACTAAAAAAAAAAAAAAATGGCTGTATGCACGA]

[+] EMBL CB658209             [CCCGCCAGCTACGTCCCCGCCCGCGCCGGGCCGCCGCTCGCCGTTCTCCCCCCAGCCAGCTCCCCCGCGCCTTCCTCGCCGCGCGCGGCCTCCTCGCCCCGCCGCGCCGCCGCGTCCCCGGCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCCTAGCCACCATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCCGCGGCGGCTGCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGGTACCCTCGCGCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGGCGCCCACGCATGGCCGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCGTCGCGCCCCGAGCAGCCTCCCCGAGGAGTCCCTATAGCTCAGCAAGCACAGCCCAAGGTCATTCCACTACCAGCTGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGGATATCAGAGAAGGACAATGATGCTGAGACAGAGAACTCATAGGAAGAGAAGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGTGCTGGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB663704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGCCCAAGGTCATTCCACTACCAGCTGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCGACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATA                                                                             ]
[-] EMBL CB658210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cnTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCGACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTACTAGACAAGAAATTTGATGGCTGTATGCACGA]
[+] EMBL CF328173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCTACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTACTAAAAAAAAAAAAAAA               ]
[-] EMBL CF328174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTTTTTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCTACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTTTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTACTAAAAAAAAAAAAAAAa              ]


>consensus_10124#0 CCCGCCAGCTACGTCCCCGCCCGCGCCGGGCCGCCGCTCGCCGTTCTCCCCCCAGCCAGC TCCCCCGCGCCTTCCTCGCCGCGCGCGGCCTCCTCGCCCCGCCGCGCCGCCGCGTCCCCG GCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCCTAGCCAC CATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCCGCGGCGGCT GCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGGTACCCTCGC GCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGGCGCCCACGCATGGC CGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCGTCGCGCCCCGAGCAG CCTCCCCGAGGAGTCCCTATAGCTCAGCAAGCACAGCCCAAGGTCATTCCACTACCAGCT GTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGAC TCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCC TTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGCCAAGC TTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGG ATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAACC GGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGT GCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTT CTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACC GACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTA GTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTT CGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGT AAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTG TGCTATTTATGCTGCTGGATGTTTGTACTAAAAAAAAAAAAAAATGGCTGTATGCACGA



consensusID : consensus_10124#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 860
fasta sequence
                              [TCCTCGCCCCGCCGCGCCGCCGCGTCCCCGGCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCCTAGCCACCATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCCGCGGCGGCTGCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGGTACCCTCGCGCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGGCGCCCACGCATGGCCGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCGTCGCGCCCCGAGCAGCCTCCCCGAGGAGTCCCTATAGCTCAGCAAGCACAGCCCAAGGTCATTCCACTACCAGCTGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGGTTAGCATGCTCACTCGTTACAAATGAATGATTTGGGCACTTGCCATGTGAAAATTTCTCTATAGTTATGTTAAACTAGATCCTAACAGGTTCTTACACGCCTCAATTGTCATTCTGGTGGTCTTATAATTTCTAGAGTTACTCTAAAGTGTATTTCTTCTCAGTTATAATTTATAAATGCAATTCTAGGACTACAACTTGATTGATTATGTTGTATGCCTGAAATTTCCTCTTACTACTTTGAACGGACACACATTTGCTCTCTGTTATTTAAAGTTTGGTTTAACATCAACAAG]

[+] EMBL CB650798             [TCCTCGCCCCGCCGCGCCGCCGCGTCCCCGGCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCCTAGCCACCATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCCGCGGCGGCTGCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGGTACCCTCGCGCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGGCGCCCACGCATGGCCGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCGTCGCGCCCCGAGCAGCCTCCCCGAGGAGTCCCTATAGCTCAGCAAGCACAGCCCAAGGTCATTCCACTACCAGCTGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAGTCAGGTTAGCATGCTCACTCGTTACAAATGAATGATTTGGGCACTTGCCATGTGAAAATTTCTCTATAGTTATGTTAAACTAGATCCTAACAGGTTCTTACACGCCTCAATTGTCATTCTGGTGGTCTTATAATTTCTAGAGTTACTCTAAAGTGTATTTCTTCTCAGTTATAATTTATAAATGCAATTCTAGGACTACAACTTGATTGATTATGTTGTATGCCTGAAATTTCCTCTTACTACTTTGAACGGACACACATTTGCTCTCTGTTATTTAAAGTTTGGTTTAACATCAACAAG]


>consensus_10124#1 TCCTCGCCCCGCCGCGCCGCCGCGTCCCCGGCGCCGGCACCGCCGCCCCCGCCCTTCACC GGCCGCCCGCTGAACCCTAACCCTAGCCACCATGCCACCGCCGCCCACGGCATCCTCTAT CCCGTCGCCACGTCCTCCGCCGCGGCGGCTGCGGCCGCCGCCACCGCGAACCACCGCCGC GCGCCCGCGGTCGCCGTAGGGTACCCTCGCGCCCACGCCGTCGCGGTGCCCATAGTGCAG CCGCAGCATCCCCTGGCGCCCACGCATGGCCGGTCGTTCCCCGCCGCCCCGAGGGCGGTG GTGGCAGGTGTGTCGTCGCGCCCCGAGCAGCCTCCCCGAGGAGTCCCTATAGCTCAGCAA GCACAGCCCAAGGTCATTCCACTACCAGCTGTAACTCCATCTCCTCAAGAGATCAACAAC TCAAAAGATAGTGAAAGGAGCAAGGAGGACTCTACAACAGTGGTTATTAATGACCGTAAA GTTAACTTGATGGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGT AATGGAGTTCCACATGAAAGTCAGGTTAGCATGCTCACTCGTTACAAATGAATGATTTGG GCACTTGCCATGTGAAAATTTCTCTATAGTTATGTTAAACTAGATCCTAACAGGTTCTTA CACGCCTCAATTGTCATTCTGGTGGTCTTATAATTTCTAGAGTTACTCTAAAGTGTATTT CTTCTCAGTTATAATTTATAAATGCAATTCTAGGACTACAACTTGATTGATTATGTTGTA TGCCTGAAATTTCCTCTTACTACTTTGAACGGACACACATTTGCTCTCTGTTATTTAAAG TTTGGTTTAACATCAACAAG



consensusID : consensus_10124#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 823
fasta sequence
                              [AATTGCNTAGTGGAGCGATGTCTCCTGTAGAGACAATGTGAGTTGTTTTGCACTGCATGCTTTCTTCTTTCCTTTGTACTAATAGACAGGCAAGGCTCCTGTCACTTTACTCCCCTCCACCACCACCACAAGGAATTCCCCTTTTGGCTCTTAATATGTGAATATCTGCAGTTCATAGTCCATATTTTGTATGTGCATCATGCTATCCATGCACTTGTCTTACTAGTTCTTGCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCGACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTACTAGACAAGAAATTT]

[-] EMBL CB650799             [AATTGCNTAGTGGAGCGATGTCTCCTGTAGAGACAATGTGAGTTGTTTTGCACTGCATGCTTTCTTCTTTCCTTTGTACTAATAGACAGGCAAGGCTCCTGTCACTTTACTCCCCTCCACCACCACCACAAGGAATTCCCCTTTTGGCTCTTAATATGTGAATATCTGCAGTTCATAGTCCATATTTTGTATGTGCATCATGCTATCCATGCACTTGTCTTACTAGTTCTTGCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACTTCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAACCGACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACTTCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATGTAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTACTAGACAAGAAATTT]


>consensus_10124#2 AATTGCNTAGTGGAGCGATGTCTCCTGTAGAGACAATGTGAGTTGTTTTGCACTGCATGC TTTCTTCTTTCCTTTGTACTAATAGACAGGCAAGGCTCCTGTCACTTTACTCCCCTCCAC CACCACCACAAGGAATTCCCCTTTTGGCTCTTAATATGTGAATATCTGCAGTTCATAGTC CATATTTTGTATGTGCATCATGCTATCCATGCACTTGTCTTACTAGTTCTTGCAGCCAAG CTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCCTGCTTCAGTCGTGGACTCTAG GATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGAAGAATGAAAC CGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAAAAAAGATCCG TGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGCGCCTTGCACT TCTCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTCGTAGAAGTGTAAAAC CGACCCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAGCCTTGGTGTTGCCGTTTT AGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTCATCTGCTGGCCTGTAACT TCGTTAGCATAGTCGTTCGAGCGACATATACTTACCCAACAACAAACTTTGACCTCCATG TAAACGTCTTCTCCGGCTGTGTTCAGCGTTTGAGTTTAACATAGTTTTATGCAATGACTT GTGCTATTTATGCTGCTGGATGTTTGTACTAGACAAGAAATTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10124#0      CCCGCCAGCTACGTCCCCGCCCGCGCCGGGCCGCCGCTCGCCGTTCTCCCCCCAGCCAGC 60
consensus_10124#2      ------------------------------------------------------------
consensus_10124#1      ------------------------------------------------------------
                                                                                   

consensus_10124#0      TCCCCCGCGCCTTCCTCGCCGCGCGCGGCCTCCTCGCCCCGCCGCGCCGCCGCGTCCCCG 120
consensus_10124#2      ------------------------------------------------------------
consensus_10124#1      ------------------------------------------------------------
                                                                                   

consensus_10124#0      GCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCCTAGCCAC 180
consensus_10124#2      ------------------------------------------------------------
consensus_10124#1      ------------------------------------------------------------
                                                                                   

consensus_10124#0      CATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCCGCGGCGGCT 240
consensus_10124#2      ------------------------------------------------------------
consensus_10124#1      ------------------------------------------------------------
                                                                                   

consensus_10124#0      GCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGGTACCCTCGC 300
consensus_10124#2      ------------------------------------------------------------
consensus_10124#1      ------------------------------------------------------------
                                                                                   

consensus_10124#0      GCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGGCGCCCACGCATGGC 360
consensus_10124#2      ------------------------------------------------------------
consensus_10124#1      ------------------------------------------------------------
                                                                                   

consensus_10124#0      CGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCGTCGCGCCCCGAGCAG 420
consensus_10124#2      -----------------------------------AATTGCNTAGTGGAGCGATG----- 20
consensus_10124#1      ----------------------------------TCCTCGCCCCGCCGCGCCGCCGCG-- 24
                                                              *    *  * **         

consensus_10124#0      CCTCCCCGAGGAGTCCCTATAGCTC--AGCAAGCACAGCCCAAGGTCATTCCACTACCAG 478
consensus_10124#2      -TCTCCTGTAGAGACAATGTGAGTT--GTTTTGCACTGCATG----CTTTCTTCTTTCCT 73
consensus_10124#1      -TCCCCGGCGCCGGCACCGCCGCCCCCGCCCTTCACCGGCCGCCCGCTGAACCCTAACCC 83
                           ** *    * *                  *** *        *      **  *  

consensus_10124#0      CTGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGTGAAAGGAGCAAG---- 534
consensus_10124#2      TTGTACTAATAGACAGGCAAGGCTCCTGTCACTTTACTCCCCTCCACCACCACCAC---- 129
consensus_10124#1      TAG--CCACCATGCCACCGCCGCCCACGGCATCCTCTATCCCGTCGCCACGTCCTCCGCC 141
                         *       *      *            *                     *       

consensus_10124#0      GAGGACTCTACAACAGTGGTTATTAATGACCGTAAAGTTAACTTGATGGAT--AGTGAGT 592
consensus_10124#2      AAGGAATTCCCC-TTTTGGCTCTTAATA--TGTGAA--TATCT--GCAGTT--CATAGTC 180
consensus_10124#1      GCGGCGGCTGCGGCCGCCGCCACCGCGAACCACCGCCGCGCGCCCGCGGTCGCCGTAGGG 201
                         **      *       *                             *      *    

consensus_10124#0      CAGGATC-CTTGTATGC-ACTTTGTCGATCATGGGTGCGTAATGGAGTTCCACATGAAAG 650
consensus_10124#2      CATATTT-TGTATGTGC-ATCATGCTATCCATGCACTTGTCTTACTAGTTCTTG------ 232
consensus_10124#1      TACCCTCGCGCCCACGCCGTCGCGGTGCCCATAGTGCAGCCGCAGCATCCCCTGG----- 256
                        *   *         **      *     ***      *           *         

consensus_10124#0      TCAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCC-TGCTTCAGTCG 709
consensus_10124#2      -CAGCCAAGCTTTGGAACTGGTGCACCAATTCTTCCAAGACCACTGCC-TGCTTCAGTCG 290
consensus_10124#1      -CGCCCACGCATGGCCGGTCGTTCCCCGCCGCCCCGAGGGCGGTGGTGGCAGGTGTGTCG 315
                        *  *** ** * *    * ** * **    *  * * * *    *       *  ****

consensus_10124#0      TGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGA 769
consensus_10124#2      TGGACTCTAGGATATCAGAAAAGGACAATGATGCTGAGAAAGAGAACTCAGAGGAAGAGA 350
consensus_10124#1      TCGCGCCCCGAGCAGCCTCCCCGAGGAGTCCCTATAGCTCAGCAAGCACAGCCCAAGGTC 375
                       * *   *  *   * *      *   * *     *     **  * * ***   ***   

consensus_10124#0      AGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAA 829
consensus_10124#2      AGAATGAAACCGGTGAATATACTGCAAGTGACTTGCTGAAGCAGCATGTGAAGCGTGCAA 410
consensus_10124#1      ATTCCACTACCAGC---TGTAACTCCATCTCCTCAAGAGATCAACAACTCAAAAGATAGT 432
                       *       *** *    * **   * *    **      * ** **  * **  *     

consensus_10124#0      AAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGC 889
consensus_10124#2      AAAAGATCCGTGCTGGTTTGCAAAAGGAGCGGCTCCGACGGATTGAAAGATACAAGCAGC 470
consensus_10124#1      GAAAGGAGCAAGGAGGACTCTACAAC-AGTGGTTATTAATGACCGTAAAGTTAACTTGAT 491
                        ****   *  *  **  *  * **  ** ** *   *  **  * **  *  *      

consensus_10124#0      GCCTTGCACTTC-----TCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTC 944
consensus_10124#2      GCCTTGCACTTC-----TCTTACCCCCGCCTAGCGAGCTTGGGAAGCATGATGGTCATTC 525
consensus_10124#1      GGATAGTGAGTCAGGATCCTTGTATGCACTTTGTCGATCATGGGTGCGTAATGGAGTTCC 551
                       *  * *    **      ***     * * * *        **  ** * ****   * *

consensus_10124#0      GTAGAAGTGTAAAACCGAC---CCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAG 1001
consensus_10124#2      GTAGAAGTGTAAAACCGAC---CCAATTTGTATTCAAGTGTTGTAGTAGCTCTTATGTAG 582
consensus_10124#1      ACATGAAAGTCAGGTTAGCATGCTCACTCGT-TACAAATGAATGATTTGGGCACTTGCCA 610
                         *  *  ** *      *   *  * * ** * *** **    * * *  *   **   

consensus_10124#0      CCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTC 1061
consensus_10124#2      CCTTGGTGTTGCCGTTTTAGTTAAGAAAAGAAAAATCTGAAGAAGCTGAAACAGCATTTC 642
consensus_10124#1      TGTGAAAATT-TCTCTATAGTTATGTTAAACTAGATCCTAACAGGTTCTTACA-CGCCTC 668
                         *     **  *  * ****** *  **   * ***  ** * * *   *** *   **

consensus_10124#0      ATCTGCTGGCCTG-TAACTTCGTTAGC---ATAGTCGTTCGAGCGACATATACTTACCCA 1117
consensus_10124#2      ATCTGCTGGCCTG-TAACTTCGTTAGC---ATAGTCGTTCGAGCGACATATACTTACCCA 698
consensus_10124#1      AATTGTCATTCTGGTGGTCTTATAATTTCTAGAGTTACTCTAA-AGTGTATTTCTTCTCA 727
                       *  **     *** *    *  * *     * ***   ** *      ***   * * **

consensus_10124#0      ACAACAAACTTTGACCTCCATGTAA-----ACGTCTTCTCCGGCTGTGTTCAGCGTTTGA 1172
consensus_10124#2      ACAACAAACTTTGACCTCCATGTAA-----ACGTCTTCTCCGGCTGTGTTCAGCGTTTGA 753
consensus_10124#1      GTTATAATTTATAAATGCAATTCTAGGACTACAACTTGATTGATTATGTTGTATGCCTGA 787
                          * **  * * *   * **   *     **  ***    *  * ****    *  ***

consensus_10124#0      GTTTAAC----ATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTAC 1228
consensus_10124#2      GTTTAAC----ATAGTTTTATGCAATGACTTGTGCTATTTATGCTGCTGGATGTTTGTAC 809
consensus_10124#1      AATTTCCTCTTACTACTTTGAACGGACACACATTTGCTCTCTGTTATTTAAAGTTTGGTT 847
                         **  *    *    ***   *    **   *    * * ** *  *  * *****   

consensus_10124#0      TAAA--AAAAAAAAAAAATGGCTGTATGCACGA 1259
consensus_10124#2      TAGA--CAAGAAATTT----------------- 823
consensus_10124#1      TAACATCAACAAG-------------------- 860
                       **     ** **                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)