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Oryza sativa
cluster # 10146 cluster # 10146       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10146#0 length = 1888 sequences # 1  
consensus_10146#1 length = 1345 sequences # 1  
consensus_10146#2 length = 1217 sequences # 1  
consensus_10146#3 length = 1215 sequences # 4  

consensusID : consensus_10146#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1888
fasta sequence
                              [CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCATTCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTAGCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTGGCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAGCCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCTCCGGCGCCCAGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATCGACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTCTCCACCGCCGCCGCCGCGGCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCCGCCGACAGCAGCCGCAAGTTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCCGCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCACCACCACCAGCTGCTCGGCTACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAACACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAGTTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTGCCGGCGGGGCTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCGGCCGGTCGCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTTCTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCGCTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTATAATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCTCGCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTAAATTCAGATGAATCGTGCGCCTTTTTTTTTTCTCCTGACACGTGCAAAAGAATTCCATTTGCCAAACTTTGATCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTTTGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAGTAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAATTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGGATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGGAATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAAAATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGCCTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAGCGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGTTCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCATGTCGCTAGGGTCAGGTATATGCACAACTGCA]

[+] EMBL AK109827             [CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCATTCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTAGCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTGGCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAGCCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCTCCGGCGCCCAGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATCGACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTCTCCACCGCCGCCGCCGCGGCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCCGCCGACAGCAGCCGCAAGTTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCCGCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCACCACCACCAGCTGCTCGGCTACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAACACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAGTTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTGCCGGCGGGGCTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCGGCCGGTCGCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTTCTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCGCTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTATAATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCTCGCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTAAATTCAGATGAATCGTGCGCCTTTTTTTTTTCTCCTGACACGTGCAAAAGAATTCCATTTGCCAAACTTTGATCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTTTGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAGTAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAATTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGGATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGGAATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAAAATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGCCTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAGCGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGTTCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCATGTCGCTAGGGTCAGGTATATGCACAACTGCA]


>consensus_10146#0 CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCAT TCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTA GCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTG GCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAG CCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCT CCGGCGCCCAGGGAGAGCCCCAACAACTCCGCCATCCGCCTCTTCGGCATCGACGTCCCG CACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAGGAATCCGTCGTCGTCTCCACCGCC GCCGCCGCGGCGTCCACGCATGGCGCTGCCGCTGCCGCCATTGCCGCGGCCGCCGACAGC AGCCGCAAGTTCGAGTGCCACTACTGCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGG GGCCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACC GCGATGGCCGCTGCCGCCGCGGCGGCCAGCGGCGCGCACCACCACCACCACCACCACCAG CTGCTCGGCTACCCGCAGCATCATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCA TTGTATCAACACCCGTCGTGGCCGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATT GGCCCTCAGTTCTATAGCGGGATCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTG CCGGCGGGGCTCTGGAGGCCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGG CGGCCGGTCGCGGTGTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCT TCTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTC GCTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTA TAATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCT CGCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTAAATTCAGATGAATCG TGCGCCTTTTTTTTTTCTCCTGACACGTGCAAAAGAATTCCATTTGCCAAACTTTGATCC TTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTTTGA ATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAGTAG TTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAATTC CTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGGATT GCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGGAAT CGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAAAAT CATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGCCTG TACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAGCGG GTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGTTCT AGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCATGTC GCTAGGGTCAGGTATATGCACAACTGCA



consensusID : consensus_10146#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1345
fasta sequence
                              [CCATCAGATCACCTTGAACCTACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTATCTAGCTAGCTTGCCCTAGCTACCTTGCCGGCGAGCTAGGCGGTGGCCGGCTGGCCGGCGATGAGCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCGTTCTCGCAGCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGCTCCAGCCCCGCGTCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCCCGACGGCGTCGTCTCCGCCGCCGGATTAGGAGGCGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACTGCTGCCGAAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACCCGGCCTACCCTGCCTACGCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCCGCACATGGCGCCGCCGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTCCCGCCCGGCGGTCCCGCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCCGCCAGGCTCCGTCTCGCACCCGATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGTGGCGTGTCCCCGCCGCCGCCATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAGAACGGCAGCCGCCGCTGTCGCTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGGTAAGGAGAGGGAACGGGGTAGGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCTCGCGGCTGTCGCGGTCGTCGTCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCACCACGAGCGCCGCCGCCTGGGAGACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGATCTCACCTTGTAATTCTCCATGAGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCTTGCCTTCTTGGTAAGTGCGAATTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTGAATTCGTTTAGCTAGAGATGCTCACAAGAGAGGGATTTTCTTTTTCTTCAGTGCCTTTTTTGCAGTCCTTTTTCGCCGCTGCACTCATTCAATATTCCAACCTCGTTCTGTAACTTGTAACTTCTGTTCATCACATTAGATTTCTTTGTTAGAAATAGAGATAAATTCAAGGACAAGACGTATGGAGCATGAAAGATTGTGGTCTCATAATTAATTACTATCTCCCTA]

[+] EMBL AK120514             [CCATCAGATCACCTTGAACCTACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTATCTAGCTAGCTTGCCCTAGCTACCTTGCCGGCGAGCTAGGCGGTGGCCGGCTGGCCGGCGATGAGCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCGTTCTCGCAGCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGCTCCAGCCCCGCGTCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCCCGACGGCGTCGTCTCCGCCGCCGGATTAGGAGGCGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACTGCTGCCGAAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACCCGGCCTACCCTGCCTACGCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCCGCACATGGCGCCGCCGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTCCCGCCCGGCGGTCCCGCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCCGCCAGGCTCCGTCTCGCACCCGATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGTGGCGTGTCCCCGCCGCCGCCATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAGAACGGCAGCCGCCGCTGTCGCTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGGTAAGGAGAGGGAACGGGGTAGGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCTCGCGGCTGTCGCGGTCGTCGTCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCACCACGAGCGCCGCCGCCTGGGAGACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGATCTCACCTTGTAATTCTCCATGAGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCTTGCCTTCTTGGTAAGTGCGAATTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTGAATTCGTTTAGCTAGAGATGCTCACAAGAGAGGGATTTTCTTTTTCTTCAGTGCCTTTTTTGCAGTCCTTTTTCGCCGCTGCACTCATTCAATATTCCAACCTCGTTCTGTAACTTGTAACTTCTGTTCATCACATTAGATTTCTTTGTTAGAAATAGAGATAAATTCAAGGACAAGACGTATGGAGCATGAAAGATTGTGGTCTCATAATTAATTACTATCTCCCTA]


>consensus_10146#1 CCATCAGATCACCTTGAACCTACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTA TCTAGCTAGCTTGCCCTAGCTACCTTGCCGGCGAGCTAGGCGGTGGCCGGCTGGCCGGCG ATGAGCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCG TTCTCGCAGCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGCTCCAGCCCCGCG TCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCCCGACGGCGTCGTCTCCGCCGCCGGA TTAGGAGGCGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACTGCTGCCGAAAC TTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCAC GCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACCCGGCCTACCCT GCCTACGCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCCGCACATGGCGCCG CCGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTCCCGCCCGGCGGTCCC GCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCCGCCAGGCTCCGTCTCGCACCCG ATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGTGGCGTGTCCCCGCCGCCGCC ATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAGAACGGCAGCCGCCGCTGTCG CTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGGTAAGGAGAGGGAACGGGGTA GGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCTCGCGGCTGTCGCGGTCGTCG TCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCACCACGAGCGCCGCCGCCTGGGA GACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGATCTCACCTTGTAATTCTCCATG AGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCTTGCCTTCTTGGTAAGTGCGAA TTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTGAATTCGTTTAGCTAGAGATGCTC ACAAGAGAGGGATTTTCTTTTTCTTCAGTGCCTTTTTTGCAGTCCTTTTTCGCCGCTGCA CTCATTCAATATTCCAACCTCGTTCTGTAACTTGTAACTTCTGTTCATCACATTAGATTT CTTTGTTAGAAATAGAGATAAATTCAAGGACAAGACGTATGGAGCATGAAAGATTGTGGT CTCATAATTAATTACTATCTCCCTA



consensusID : consensus_10146#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1217
fasta sequence
                              [AAAGAAAGAAAGAAAAATCTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCTCCTCCTCTCTTCTCTTCTCTTCTCCCCCTTCGCTTCTCTTTCCCCCCACTCAATCAAACCCTAACCCTACTGCGTACGCCGCGCCATCGACGACGACGCGCTCGCGCGATGAGCGTTGAGCGAGATGGGCGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGCCAGGCGGCCCGCGAGAAGCCGCCGTCGTCGTCGTCCGGCGGCTCCGTCGTCGTCCCTCCTGCGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTGCTAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACGGCGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTACTGCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCACGGTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCACCACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGCACTACCCGTCGTGGGCTGCAGGCTCCAGGTACTACAGCGGTCCAGGATCCATCTCGCAGCCGATCAACGGGAGCCCGGTGGCGCCGGCCGGGATGTGGCGGCTCCCTGCCGCCGCCAGCTGCGTCGGCTTGGCGACGACGACGACTACGGCGGCGCCGCTGCCCGCGCGGCGCCAAGAGCGGCCGGCGGCGACAATTCCTTCGCTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCTGGCTCCACCTCGTTCTCGCCGTCGACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAGCGGCGCGCGCAGCCAGCGCGTAAAGAGAATGTGAGTTTGGATCTGAGCTTGTAGCAGCGGAGGAATGATGGCCGGTGTCAGCCTCATAATTGTTTCTTAATTACAAAACAAAATCAAGTGCCTTTTCATTTCACGTTTGGATTTATTTTCAGCTCGTTGAGCTAATACCAATGGTACTAGAGATCAGCTACTAATTA]

[+] EMBL AK058457             [AAAGAAAGAAAGAAAAATCTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCTCCTCCTCTCTTCTCTTCTCTTCTCCCCCTTCGCTTCTCTTTCCCCCCACTCAATCAAACCCTAACCCTACTGCGTACGCCGCGCCATCGACGACGACGCGCTCGCGCGATGAGCGTTGAGCGAGATGGGCGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGCCAGGCGGCCCGCGAGAAGCCGCCGTCGTCGTCGTCCGGCGGCTCCGTCGTCGTCCCTCCTGCGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTGCTAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACGGCGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTACTGCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGGAGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCACGGTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCACCACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGCACTACCCGTCGTGGGCTGCAGGCTCCAGGTACTACAGCGGTCCAGGATCCATCTCGCAGCCGATCAACGGGAGCCCGGTGGCGCCGGCCGGGATGTGGCGGCTCCCTGCCGCCGCCAGCTGCGTCGGCTTGGCGACGACGACGACTACGGCGGCGCCGCTGCCCGCGCGGCGCCAAGAGCGGCCGGCGGCGACAATTCCTTCGCTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCTGGCTCCACCTCGTTCTCGCCGTCGACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAGCGGCGCGCGCAGCCAGCGCGTAAAGAGAATGTGAGTTTGGATCTGAGCTTGTAGCAGCGGAGGAATGATGGCCGGTGTCAGCCTCATAATTGTTTCTTAATTACAAAACAAAATCAAGTGCCTTTTCATTTCACGTTTGGATTTATTTTCAGCTCGTTGAGCTAATACCAATGGTACTAGAGATCAGCTACTAATTA]


>consensus_10146#2 AAAGAAAGAAAGAAAAATCTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCT TCTCCTCCTCTCTTCTCTTCTCTTCTCCCCCTTCGCTTCTCTTTCCCCCCACTCAATCAA ACCCTAACCCTACTGCGTACGCCGCGCCATCGACGACGACGCGCTCGCGCGATGAGCGTT GAGCGAGATGGGCGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGC CAGGCGGCCCGCGAGAAGCCGCCGTCGTCGTCGTCCGGCGGCTCCGTCGTCGTCCCTCCT GCGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTG CTAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACG GCGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTAC TGCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGG GAGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCAC GGTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCAC CACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGCACTAC CCGTCGTGGGCTGCAGGCTCCAGGTACTACAGCGGTCCAGGATCCATCTCGCAGCCGATC AACGGGAGCCCGGTGGCGCCGGCCGGGATGTGGCGGCTCCCTGCCGCCGCCAGCTGCGTC GGCTTGGCGACGACGACGACTACGGCGGCGCCGCTGCCCGCGCGGCGCCAAGAGCGGCCG GCGGCGACAATTCCTTCGCTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCT GGCTCCACCTCGTTCTCGCCGTCGACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAG CGGCGCGCGCAGCCAGCGCGTAAAGAGAATGTGAGTTTGGATCTGAGCTTGTAGCAGCGG AGGAATGATGGCCGGTGTCAGCCTCATAATTGTTTCTTAATTACAAAACAAAATCAAGTG CCTTTTCATTTCACGTTTGGATTTATTTTCAGCTCGTTGAGCTAATACCAATGGTACTAG AGATCAGCTACTAATTA



consensusID : consensus_10146#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1215
fasta sequence
                              [ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAACTCCCATATCCCCTTAAAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAAGATATAGCAGCAGCTAGCAAGAATTGCCCCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGATAGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTTCGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACTCTTTTTGCCTTGTCCGGATCCAAGTTTAGCTAGCTACCTAGCTTGTGTTGCCACTTTATTTTTACCAGGCAAAGAAAAAGAAAATCC]

[+] EMBL AK068762             [ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAACTCCCATATCCCCTTAAAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAAGATATAGCAGCAGCTAGCAAGAATTGCCCCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGATAGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTTCGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACTCTTTTTGCCTTGTCCGGATCCAAGTTTAGCTAGCTACCTAGCTTGTGTTGCCACTTTATTTTTACCAGGCAAAGAAAAAGAAAATCC]
[+] EMBL AK058592             [                                                                                                   ACGCAAGATATAGCAGCAGCTAGCAAGAATTGCCTCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGATAGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTTCGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACT                                                                                       ]
[-] EMBL BI305764             [                                                                                                                                                                                                                                                                                                                                               TGCAGCTGCGGCCCACGGAGGCCGGTGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCA         ACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCGCTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB631908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGCCGGCGCACTACCCGATGTGGACGAGCGCCGCCCCGGGCGCCTTCGCCGGGCCCGGCTCCATGGCGCAGCCCATCAACGGTAGCCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGCCGGCAGGCAGGGCGCTGACAAACTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGAGGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGGTGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAGCAGTCGCAAGAAAGGGTATGTTAATT                                                                                                             ]


>consensus_10146#3 ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAACTCCCATATCCCCTTA AAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAAGATATAGCAGCAGCT AGCAAGAATTGCCCCGAGTTGGGTGGTTAATTCTTGGTTTTGGTTCACGTAGAAGCAGAT AGCTTGGTTGGTTGGTTAGACGGCCATGGCGAAGCCGCAGGACATGCGCAGCGTCGACTC GTTCTCGCAGCTGCCGTTCATCCGGCCGGCGCCGCCGCCGCAGCAGCAGGCGCGGGACAC AATCCGGCTGTTCGGCTGCGAATTCTCCAACGACCTGCAGCTGCGGCCCACGGAGGCCGG TGCAGGCTCCCCCGACGCGGCCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGG CGACGGCGGCACCAAGAACGGCGGCGCCGCGACGGCGGCGGCGGAGCGCAAGTTCGAGTG CCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCA CAAGAGGGAGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACCG CTACATGCCGGGGCACATGTACGGCCTCTTCAACTACCACCACCACATCGGCGGCCGCTT CGACCACCACCCGCCGCCGCCGCCGCCGCCGCCACCGCCGGCGCACTACCCGATGTGGAC GAGCGCCGCCCCGGGCGCCTTCGCCGGGCCAGGTTCCATGGCGCAGCCCATCAACGGTAG CCCCGTGCAGGCCGGGCTGTGGAGCGTGCCGCCGCCGACGGAGAATTTCGGCAGCACGGC CGGCAGGCAGGGCGCTGACAAGCTGGCTACTACGGTGGCGGGCACGCCGGCGGCGGGGGA GGTGGCATGCAAGGACGAGATGGTGCCGATGAGCTTGCTGTCCTCGTCGCCTTCGTTGTC GTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGGTGTGAATTGGGGCAGAAGGAGGG TGTCAGCTTGGACCTCCATTTGTAATCCATGTCTAATTAGGTTTTCTTCTTGTGGATTAG CAGTCGCAAGAAAGGGTATGTTAATTCTCATAGCTTAAATAATCTACTCTTTTTGCCTTG TCCGGATCCAAGTTTAGCTAGCTACCTAGCTTGTGTTGCCACTTTATTTTTACCAGGCAA AGAAAAAGAAAATCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10146#2      ------------------------------------------AAAGAAAGAAAGAAAAAT 18
consensus_10146#3      ---------------ATGGTCCCCCTCTTCGTCCCCCTCTCCTCCGCCCCAGCTTACAAC 45
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      CTTTCTGCTCTTTCTATTCCCTCCCTCCCTTCTCCCTTCATAGTTCCACCCTCCTTCCAT 60
                                                                                   

consensus_10146#2      CTTCAATAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCTTCTCCTCCTCTCTTCTCT 78
consensus_10146#3      TCCCATATCCCCTTAAAACCACACCAACTCGTAGCCAATTTCTTCAGCGCGGAGACGCAA 105
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      TCCTCTCTGCTGGTCAGGGACGAGAGAAACGTAAACCCAGCCGTGACATTATATTGCCTA 120
                                                                                   

consensus_10146#2      TCTCTTCTCCCCCTTCGCTTCTCTTTCC--CCCCACT---CAATCAAACCCTAACCCTAC 133
consensus_10146#3      GATATAGCAGCAGCTAGCAAGAATTGCC--CCGAGTTGGGTGGTTAATTCTTGGTTTTGG 163
consensus_10146#1      ----------------------------------------CCATCAGATC---ACCTTGA 17
consensus_10146#0      GCTAGTTGATTAATTTGTTGCAAGAACTGGCTAGCTAGCTCGAGAAATTCTGTGTACCTG 180
                                                                    *   *          

consensus_10146#2      TGCGTACGCCGCGCCATCGACGACGACGCGC-TCGCGCGATGAGCGTTGAGCGAGATGGG 192
consensus_10146#3      TTC--ACGTAGAAGCAGATAGCTTGGTTGGT-TGGTTAGACGGCCAT--GGCGAAGCCG- 217
consensus_10146#1      ACC---TACCTAGCTAGCGAGCTAATCTCCTGTAGTTCAGTAGCTATCTAGCTAGCTTGC 74
consensus_10146#0      GCCGGGTGCATGGGCAGCGGCGGCGAAGGAGGTGGTGGAGCAGCGAGCGTACGGGATCAG 240
                         *            *                * *                *        

consensus_10146#2      ------CGCGACCAGCCCAACATCGACTCGTTCTCGCAGCTGCCGTTCATCCGCCAGGCG 246
consensus_10146#3      ------CAGGACATGCGCAGCGTCGACTCGTTCTCGCAGCTGCCGTTCATCCGGCCGGCG 271
consensus_10146#1      ------CCTAGCTACCTTGCCGGCGAGCTA----GGCGGTGGCCGGCTGGCCGGCGATGA 124
consensus_10146#0      CCGCCGCATGACTTCGCCAACGTCGCGTCCTTCTCCGAGTTGCCGTTCCTGCGGCCGGCT 300
                             *    *        *  **             *  ****      ** *     

consensus_10146#2      GCCCGCGAGAAGCCGCCGTCGT----CGTCGTCCGGCGGCT-CCGTCGTCGTCCCTCCTG 301
consensus_10146#3      CCGCCGCCGCAGCAGCAGGCGCGGGACACAATCCGGCTGTT-CGGCTGCGAATTCTCCAA 330
consensus_10146#1      GCGAGCACGACGCGAAACACGTCGGAGACGTGCCGGCGGCCGCGGGCATCGAGTCGTTCT 184
consensus_10146#0      CCG-GCGCCCAGGGAGAGCCCC----AACAACTCCGCCATC-----CGCCTCTTCGGCAT 350
                        *         *       *             * **                 *     

consensus_10146#2      CGCCCATCCGGCTGTTCGGCTTCGACGTGCCGCCGGACGCGTCCACCACCGCCGATGTGC 361
consensus_10146#3      CGACC-TGCAGCTG--CGGCCCACGGAGGCCGGTGCAGGCTCCC-------CCGACGCGG 380
consensus_10146#1      CGCA---GCTGCCGTTCGTGCGCCCGAGGCCGGCGGCGATGGCCGGC----TCCAGCCCC 237
consensus_10146#0      CGACGTCCCGCACGCGTCGTCGTCGCCTGACGGCAAAGCCTCCAAG-------GAATCCG 403
                       **      *    *              * **          *           *     

consensus_10146#2      TAGGAGAGAACAAGGAGAGCGCCGCCGCCGTCGTCGCCGCTGAGGGGAGTAAACAAACGG 421
consensus_10146#3      CCAACGGCAGCACGGTCACGTCAGAGGGCAGCAACGGCGGCGACGGCGGCA--CCAAGAA 438
consensus_10146#1      GCGTCGTCCATCCGGCTGTTCGGGTTCGAGCTCCCGCC--CGACGGCGTCG--TCTCCGC 293
consensus_10146#0      TCGTCGTCTCCACCGCCGCCGCCGC-GGCGTCCACGC-----ATGGCGCTG--CCGCTGC 455
                            *        *        *          **      * **              

consensus_10146#2      CGTCCGGTCTGGACGCAATCGGCGGCGGCGGCGGGAGCCGGAAGTTCGAGTGCCACTACT 481
consensus_10146#3      CGGCGGCGCCG--------CGACGGCGGCGGCGGAG--CGCAAGTTCGAGTGCCACTACT 488
consensus_10146#1      CGCCGGATTAGGAGG----CGGCGGCGGCGGCGGCGGGCGCAAGTTCGAGTGCCACTACT 349
consensus_10146#0      CGCCATTGCCG--------CGGCCGC--CGACAGCAGCCGCAAGTTCGAGTGCCACTACT 505
                       ** *      *        ** * **  ** * *    ** *******************

consensus_10146#2      GCTGCCGGAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGG 541
consensus_10146#3      GCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGCGGCCACCAGAACGCGCACAAGAGGG 548
consensus_10146#1      GCTGCCGAAACTTCCCGACGTCGCAGGCGCTGGGCGGGCACCAGAACGCGCACAAGCGGG 409
consensus_10146#0      GCTGCAGGCACTTCCCGACGTCGCAGGCGCTCGGGGGCCACCAGAACGCGCACAAGCGGG 565
                       ***** *  ********************** ** ** ****************** ***

consensus_10146#2      AGCGGCAGCGCGCGAAGCACGCGCAGTTCCAGACGGCCATGGCCATGCACCACGGCCACG 601
consensus_10146#3      AGCGGCAGCACGCCAAGCGAGCTCACCTCCAGGCCTCCCTCGCCATGCACC---GCTACA 605
consensus_10146#1      AGCGGCAGCACGCGAAGCGCGCGCAGTTCCAGAGCGCCATGGCCATGCACGCGCACTACC 469
consensus_10146#0      AGCGGCAGCACGCGAAGCGGGTGCAGATGCAGACCGCGATGGCCGC-TGCCGCCGCGGCG 624
                       ********* *** ****  *  **  * ***    *  * ***     *     *  * 

consensus_10146#2      GTCAGTACTACCCGCTCCCGGACCCCTACGCGGCGGCGTTCGCGGCGTACCCCGGCCACC 661
consensus_10146#3      TGCCGGGGCACATGTAC--GGCCTCTTCAACTACCACCACCACATCGG----CGGCCGCT 659
consensus_10146#1      CGGCCTACCCTGCCTAC--GCCAGCTACTACGGCTCGCACCGCTTCGGCCCCTAGCCGCC 527
consensus_10146#0      GCCAGCGGCGCGCAC-CACCACCACCACCACCACCAGCTGCTCGGCTACCCGCAGC-ATC 682
                                       *       *     *  *      * *  *        **    

consensus_10146#2      ACCACCACCACCGCTTCGCCGCCACCGCCGCCGCCGCCATGCCTCCGCCGCCGC-ACTAC 720
consensus_10146#3      TCGACCACCACC----CGCCGCCGCCGCCGCCGCCGCCA-----CCGCCGGCGC-ACTAC 709
consensus_10146#1      GCACATGGCGCCGC--CGCCGCCGCCGCCGTACCCCTCGTGGTCCAACCACCACCACCTC 585
consensus_10146#0      ATCACCGCTTCGGCTTGGCAGGCCCCACGGTGGCGGCATTGTATCAACACCCGTCGTGGC 742
                                 *      ** * * ** * *   *          *  *   *       *

consensus_10146#2      C--CGTC--GTGG-GCTGCAG---------GCTCCAGGTAC-TACA--GCGG------TC 757
consensus_10146#3      C--CGAT--GTGG-ACGAGCGCC-------GCCCCGGGCGCCTTCG--CCGG------GC 749
consensus_10146#1      C--CGCCCGGCGG-TCCCGCGCCCATGGTGGCGGCGAGGTACTACGGCCCGGCGCC--GC 640
consensus_10146#0      CGACGATGAGCGGCGGCGGCGGCGGTATCTCCTCAATTGGCCCTCAGTTCTATAGCGGGA 802
                       *  **    * **       *          *            *    *          

consensus_10146#2      CAGGATCCATCTCGCAGCCGATCAACGGGAGCCCGGTGGCGCCGGCCGG------GATGT 811
consensus_10146#3      CAGGTTCCATGGCGCAGCCCATCAACGGTAGCCCCGTG---CAGGCCGG------GCTGT 800
consensus_10146#1      CAGGCTCCGTCTCGCACCCGATCAACGGCAGCCCGGTGGTGCCGGCCGCCGCTGCGCTGT 700
consensus_10146#0      TCGGATCGGTCACCCAGCCGATCAACGGGAGCCCGCTG---CCGGCGGG------GCTCT 853
                         ** **  *  * ** ** ******** *****  **   * *** *       * * *

consensus_10146#2      GGCGGCTCCCTGCCGCCGCCAGCTGCGTCGGCTTGGCGAC---GACGACGAC-------- 860
consensus_10146#3      GGAG----CGTGCCGCCGCCGACGGAGA-ATTTCGGCAGC---ACGGCCGGC-------- 844
consensus_10146#1      GGCGTGTCCCCGCCGCCGCCATCGCCGTGGCGGCGGCCGCCGCGCCGCTGGCGCGCCAAG 760
consensus_10146#0      GGAGG----CCGGGCCCGATGGCGGCGCCGCCGCTGCTGGCCGGAGAGCGGCG------- 902
                       ** *       *   ***    *   *        **            * *        

consensus_10146#2      TACGGCGGC-------GCCGCTGCCCGCGCGGCGCCAAGAGCGGCCGGCGGCGACAATTC 913
consensus_10146#3      A--GGCAGG-------GC-GCTGACAAGCTGGCTACTACGGTGGCGGGCA-CGCCGGCGG 893
consensus_10146#1      AACGGCAGCCGCCGCTGTCGCTGGCCGGTGGACGCGAGGAGGAGGACGCAATGGTGGAGG 820
consensus_10146#0      GCCGGTCGCGGT-GTCGACGTCGTCCGTGTTCCGAGGAGACGAGCCAAGAGCTTCAGCTT 961
                          **  *        *  *  * *       *          *                

consensus_10146#2      CTTCG---------CTGCTCGGAGGCGGCGAGGAGCCCGTGGTGCTGGGAGGAGCTGGCT 964
consensus_10146#3      CGGGG---------GAGGTGGCATGCAAGGACGAG---ATGGTGCCG--ATGAGCTTGCT 939
consensus_10146#1      TAAGGAGAGGGAACGGGGTAGGCGGCGCCGCCGCCGCGGTGGTGCAACTGCAACCCGGCT 880
consensus_10146#0      CTCTTGTGGCGTCCCAGACAGCTTCTTCCTCTTTGCTGCTGTCTCCGCAAGGTCAGTTCG 1021
                                       *   *                  **   *             * 

consensus_10146#2      CCACCTCGTTCTCGCCGTCG-ACGTCCTCCTCCTCGTCGTCGGCGTCGCCGCACGAGCGG 1023
consensus_10146#3      GT-CCTCGTCGCCTTCGTTG-TCGTCGTGCTCGTCGACGTCGCCGGAGATGCTAGGTAGG 997
consensus_10146#1      CGCGGCTGTCGCGGTCGTCG-TCCTCGTCGTCGTCGGCGTCGTCGTCTTCGCAGCATCAC 939
consensus_10146#0      CTTGTGAGCAGCCGCCGGCGACCACCGCAGCTGAGGGCGTGAGCTTAGATTTGCACCTAT 1081
                              *       **  *  *  *         * ***   *                

consensus_10146#2      CGCGCGC---------------AGCCAGCGCGTA------AAGAGAATGTGAGTTTGGAT 1062
consensus_10146#3      TGTG------------------AATTGGGGCAGA------AGGAGGGTGTCAGCTTGGAC 1033
consensus_10146#1      CACGAGCGCCGCCGCCTGGGAGACCTGGCAGAGATTAACCGGGAGAATGTGAGCTTGGAT 999
consensus_10146#0      AATTGTTCTTTTTTCTTCTGTTGGTTTTAGCGGATTACTACGTACAATAACTGATTTCTC 1141
                                                        *         *   *    * **    

consensus_10146#2      CTGAGCTTGTAGC---AGCGGAGGAATGATGGCC-------------GGTGTCAGCCTCA 1106
consensus_10146#3      CTCCATTTGTAAT---CCATGTCTAATTAGGTTTTCTTCTT--GTGGATTAGCAGTCGCA 1088
consensus_10146#1      CTCACCTTGTAATTCTCCATGAGAATTGAGAGATGCGTGCGCGATTAATTAGCGGGTTCT 1059
consensus_10146#0      GCTACCTTTTCTTCCTTGCCTGGGAATGAGATTGCCCTTTACTA-AATTCAGATGAATCG 1200
                             ** *              * * *                         *   * 

consensus_10146#2      T--AATTGTTTCTTAATTA-CA--AAACAAAATCAAGTGCCTTTTCATTTCACGTTTGGA 1161
consensus_10146#3      AGAAAGGGTATGTTAATTCTCA--TAGCTTAAATAATCTACTCTTTTTGCCTTGTCCGGA 1146
consensus_10146#1      T--GCCTTCTTGGTAAGTGCGAATTAAGAGAAAAAAATAATTCTTTTTCTTTAGTTCGTG 1117
consensus_10146#0      TGCGCCTTTTTTTTTTCTCCTG---ACACGTGCAAAAGAATTCCATTTGCCAAACTTTGA 1257
                                 *  *   *       *        **     *     *            

consensus_10146#2      TTTATTT-TCAGCTCGT---TGAGCTAATACCAATGGTACTAGAGAT--CAGCTA----- 1210
consensus_10146#3      TCCAAGT-TTAGCTAGC---TACCTAGCTTGTGTTGCCACTTTATTT--TTACCAGG--- 1197
consensus_10146#1      AATTCGT-TTAGCTAGA---GATGCTCACAAGAGAGGGATTTTCTTT--TTCTTCAG--- 1168
consensus_10146#0      TCCTTTTGTTAATGTGCATATATACACATGACAAAATAATTTGGGTACATTGTTAGGGTT 1317
                             * * *    *                      * *                   

consensus_10146#2      CTAATTA----------------------------------------------------- 1217
consensus_10146#3      CAAAGAAAAAGAAAATCC------------------------------------------ 1215
consensus_10146#1      TGCCTTTTTTGCAGTCCTTTTTCGC-CGCTGCACTCATTCAATATTCCAACCTCGTTCTG 1227
consensus_10146#0      TGAATTATCATAAATTACGTCCAATACAAAACGCCTATGCATTTGAAAATGTTTACTAAG 1377
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      TAACTTGTAACTTCTGTTCATCACATTAGATTTCTTTGTTAGAAATAGAGATAAATTCAA 1287
consensus_10146#0      TAGTTAGTTGAGGAACAGTCAGGTTTCATGCTGTTTCTAGACAATAAATGTGCATATTAA 1437
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      GGACAAGACGTATGGAGCATGAAAGATTGTGGTCTCATAATTAATTACTATCTCCCTA-- 1345
consensus_10146#0      TTCCTACGATGAAAGAGAACAGAAATTACAACTGCATGCATTAACCAATTTCAATTTCGG 1497
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      ATTGCAAAAGCACCAGGGACAATAAAAGAGTAAGATTTTAACTGATCATATTTTTCACGG 1557
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      AATCGGTCACATATAAGTAAGCTGAAAGTGCACAATACTTTTTCAACAATTGAAAAAAAA 1617
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      AATCATAATGCATATACTTTTCATGCGGCCCAGTAAACTGCTGCAGCTTGCAGGGCCGGC 1677
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      CTGTACGTATGCACACGCTAAAAAACATGAAGGATATAGACACTAAAATTCTTTCTGAAG 1737
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      CGGGTGCAGAGTTTTTTGTTTTTTTTAATCCTCTGTACGTGCGTACCTATGGGCAACAGT 1797
                                                                                   

consensus_10146#2      ------------------------------------------------------------
consensus_10146#3      ------------------------------------------------------------
consensus_10146#1      ------------------------------------------------------------
consensus_10146#0      TCTAGCAACTGCTGCTGCTTGTATGCAATGAGGCTGTAGCTTTATGTGTAGCTTTCGCAT 1857
                                                                                   

consensus_10146#2      -------------------------------
consensus_10146#3      -------------------------------
consensus_10146#1      -------------------------------
consensus_10146#0      GTCGCTAGGGTCAGGTATATGCACAACTGCA 1888
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)