These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10159#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2476 fasta sequence [GAGAGAGAAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAATGGCCGCGGCGGCGCGGGAGGAGGAGGAGGCGTCGACGGCGGCGAGGAGCCGGCAGGAGAGCGAGGGGGAGGAGGAGGAGGTGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGTAAGGATAACACTCTCACCATCATATGTCCATATTCGTCCATTTCTACCTGTACTTTTTCTTTGAAAAGATTCTGGTCAAAAACTGCTCTCGAGGTAAACATGTAAAACCACCTGAGGTTACTTGCTATTGCTATTGATAGGAACTAGGAAAACCTCCTATTTGGAACATGCTTTGAGTCAATTTTAGAATGTACCATTACCACTGGTGAATATTATTACACCGAATAGATTTTTTCATCACTGATGTATTGCCTATTAGGGCTGAGAAAAAAATGTTTGTTGTGTACTTGTGTATTTTGAACTGTGCATTTCTGTATTTTTACCTTCTTGCTTCTTTCTTTAGTTTACATGTAATCTACAAGCCATAGGTTTATGTTGTAATTTCTCTTGTTATACCACTGACAGTTTCTTGAAATGCGGGCCCTTATCAGCAAAGTCGTCCTTTCCATAGTCCTATCCTTGAGTTGTTAATGCAGGACATGTTTGACTTGTCAATGTGTGCTACATTTGCTTACACAATTATGTATGTCTGTGGCATGTCTTAAACCTAGTCAGCCTGATAAGCATCATGCTTTTTTTATTTCAAATTGTGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGTTCTTTACTTATATTATATGGTACTGTGAATCAGACTGCACGTTGGACTTGCCAATATTTTACTCATTTAATAGCCATTTCAGTCTTGAAATACTAAATATAAATTGCTATCTCAGTTCTTATGTAAAAAATGTTATTGGAATTTATTGCATCACTCTATATTACATATGTGCATCAATTTTCTTGAAATTATCCTTTGTTCATAAATCTGACAGAAGATTAAAATTGTTTCAGGCCATGGTTTACTTAATTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGTACGTATTTCTTGGCATTACCATTTTTCATTTAAAGCATTGAAACAGGTTGTTATTGTGCAGCCTAGTATTAGTGCTTAACTGCTTAATGCAGTTGGTTGTCTCTTCTTTTCATTTGCATCACACAGTATGGCTATGAATGCTTAACTCAAACAAATGAAAACTAAATCCTGCTGGTCTTGATAGTTTGGACTTTGGATACCTGCCATAGTTATGTTGTCAACATACGGGTAGATATAAATATGAGCACTTCAATTTAGGAATTGCCAAGCACAAAGTTTGGAGAAAATCCAGCCATCTCATTGACTGTCTTTTTTTGTGATTAAGCTGATTGTGCACCTTCGTTTCTTTTCCTTGACTTTTTTTTCCTGATACAGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCA-GCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACTTTCAGGGACAAATTGACATGAATCAAATGA] [+] EMBL AK070185 [GAGAGAGAAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAATGGCCGCGGCGGCGCGGGAGGAGGAGGAGGCGTCGACGGCGGCGAGGAGCCGGCAGGAGAGCGAGGGGGAGGAGGAGGAGGTGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGTAAGGATAACACTCTCACCATCATATGTCCATATTCGTCCATTTCTACCTGTACTTTTTCTTTGAAAAGATTCTGGTCAAAAACTGCTCTCGAGGTAAACATGTAAAACCACCTGAGGTTACTTGCTATTGCTATTGATAGGAACTAGGAAAACCTCCTATTTGGAACATGCTTTGAGTCAATTTTAGAATGTACCATTACCACTGGTGAATATTATTACACCGAATAGATTTTTTCATCACTGATGTATTGCCTATTAGGGCTGAGAAAAAAATGTTTGTTGTGTACTTGTGTATTTTGAACTGTGCATTTCTGTATTTTTACCTTCTTGCTTCTTTCTTTAGTTTACATGTAATCTACAAGCCATAGGTTTATGTTGTAATTTCTCTTGTTATACCACTGACAGTTTCTTGAAATGCGGGCCCTTATCAGCAAAGTCGTCCTTTCCATAGTCCTATCCTTGAGTTGTTAATGCAGGACATGTTTGACTTGTCAATGTGTGCTACATTTGCTTACACAATTATGTATGTCTGTGGCATGTCTTAAACCTAGTCAGCCTGATAAGCATCATGCTTTTTTTATTTCAAATTGTGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGTTCTTTACTTATATTATATGGTACTGTGAATCAGACTGCACGTTGGACTTGCCAATATTTTACTCATTTAATAGCCATTTCAGTCTTGAAATACTAAATATAAATTGCTATCTCAGTTCTTATGTAAAAAATGTTATTGGAATTTATTGCATCACTCTATATTACATATGTGCATCAATTTTCTTGAAATTATCCTTTGTTCATAAATCTGACAGAAGATTAAAATTGTTTCAGGCCATGGTTTACTTAATTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGTACGTATTTCTTGGCATTACCATTTTTCATTTAAAGCATTGAAACAGGTTGTTATTGTGCAGCCTAGTATTAGTGCTTAACTGCTTAATGCAGTTGGTTGTCTCTTCTTTTCATTTGCATCACACAGTATGGCTATGAATGCTTAACTCAAACAAATGAAAACTAAATCCTGCTGGTCTTGATAGTTTGGACTTTGGATACCTGCCATAGTTATGTTGTCAACATACGGGTAGATATAAATATGAGCACTTCAATTTAGGAATTGCCAAGCACAAAGTTTGGAGAAAATCCAGCCATCTCATTGACTGTCTTTTTTTGTGATTAAGCTGATTGTGCACCTTCGTTTCTTTTCCTTGACTTTTTTTTCCTGATACAGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCA GCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACTTTCAGGGACAAATTGACATGAATCAAATGA] [-] EMBL CF319962 [ CCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCACCGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGACCCACTCGTCCCATCAGATCTACCAGACCAGTAGGATAATACCAGTTGCCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATGGGCGNCGNCAGGCNCCCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAAaaaaaaa ] consensusID : consensus_10159#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 882 fasta sequence [GGGAGGNNAGGATAACACTCTACACCATCATATGTCCATATTCGACCATTTCTACCTGNNCTNTTNCTTTGAAAAGATTCTGGTCAAAAACTGCTCTGGGGGTAAACATGTNAAACCACCTGAGGTTACTTGCTATNGNTATNGATAGGAACTAGGNAAACCTNCTATTTGNAACATGCTTTGNGTCAATTNTAGAATGTACCATTACCACTGNNGANTATTATTACACCGNATAGATTTTTTCATCACTGATGTNTTGCCTATTANGGCTGAGAAAAAAATGTTNGGTGTGTACTTGNGTACTTTGAACTGNGCANTNCTGTATTNTTACCTTATTGCTTCCTTCTTTAGTTTACATGNNATNTACAAGCCATAGGATTATGTTGTNATTTCTCTTGTTATACCACTGACAGGTNCTTGAAATGCGGGCCCTTATCANCAAAGTCGNNCTTTCCATAGTCCTATCCTTGAGTTGATAATGCAGGACATGNTTGACTTGNCAATGTGNGCTACATTAGCTTACACAANTATGTATGNCTGNGGCATGNCTTAAACCTAGNCANCCTGATAAGCATCATGCTNTNNTTATTTCAAATTGAGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGNTCTNTACTTATATTATATGGTACTGGGNATCAAACTGCACGGTGGTCTTGCCAATANTTTACTCATNTAATAGNCATTTTCAGTCTTGAAATACTAAANATAAANTGCTATCTCAGTTCTTATGTAAAAAAGGTATNGGAATGNATTGCATCACTCTATATTACATAAGGGCATCAAATTTCTTGAAATATACCTTTGCTCNTAAATCTGACAGAANATTAAATTGGTTTAGGCCATGGCTTACTTA] [+] EMBL CA765381 [GGGAGGNNAGGATAACACTCTACACCATCATATGTCCATATTCGACCATTTCTACCTGNNCTNTTNCTTTGAAAAGATTCTGGTCAAAAACTGCTCTGGGGGTAAACATGTNAAACCACCTGAGGTTACTTGCTATNGNTATNGATAGGAACTAGGNAAACCTNCTATTTGNAACATGCTTTGNGTCAATTNTAGAATGTACCATTACCACTGNNGANTATTATTACACCGNATAGATTTTTTCATCACTGATGTNTTGCCTATTANGGCTGAGAAAAAAATGTTNGGTGTGTACTTGNGTACTTTGAACTGNGCANTNCTGTATTNTTACCTTATTGCTTCCTTCTTTAGTTTACATGNNATNTACAAGCCATAGGATTATGTTGTNATTTCTCTTGTTATACCACTGACAGGTNCTTGAAATGCGGGCCCTTATCANCAAAGTCGNNCTTTCCATAGTCCTATCCTTGAGTTGATAATGCAGGACATGNTTGACTTGNCAATGTGNGCTACATTAGCTTACACAANTATGTATGNCTGNGGCATGNCTTAAACCTAGNCANCCTGATAAGCATCATGCTNTNNTTATTTCAAATTGAGATTCATTCTGTATAGGATAAGTTCTAGTGAGATGNTCTNTACTTATATTATATGGTACTGGGNATCAAACTGCACGGTGGTCTTGCCAATANTTTACTCATNTAATAGNCATTTTCAGTCTTGAAATACTAAANATAAANTGCTATCTCAGTTCTTATGTAAAAAAGGTATNGGAATGNATTGCATCACTCTATATTACATAAGGGCATCAAATTTCTTGAAATATACCTTTGCTCNTAAATCTGACAGAANATTAAATTGGTTTAGGCCATGGCTTACTTA] consensusID : consensus_10159#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 785 fasta sequence [CATGGACTGAGGAGTAGAAATAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCA] [+] EMBL CF319961 [CATGGACTGAGGAGTAGAAATAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACAGGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCAGCAACCATATGTGGGTGATAGG ] [-] EMBL CB665366 [ ATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGAAATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTGTGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATAATCTGTACTGCAATTACA GGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCTGGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTGATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCA] consensusID : consensus_10159#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 609 fasta sequence [AGGAGGCGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGCCATGGTGTACTTAGTTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTACATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCTGTGTCTGGCATGGGCGGGGTGATACCATTTGATAACGAAGCAACGGTGAATGAAATAAGGCTT] [+] EMBL CB665365 [AGGAGGCGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGAGGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCGGAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGGAGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGCCATGGTGTACTTAGTTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTACATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTCCAGTGCTGTGTCTGGCATGGGCGGGGTGATACCATTTGATAACGAAGCAACGGTGAATGAAATAAGGCTT] consensusID : consensus_10159#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [TNNCGGTCCCATTCCATGATGCTACCAGAGCAGTAGGATNAATGATCAGTTGCCAGTTGTATTGGCATATGACCCTTGGGGCACAGAATTCGAATTGAATATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCCGGNCAAGAATAATAATCTGCTACGTGCACATTGACAGNCCTTTTGTTTATCAAGCCTGAAAATTTTGTATTGGCGCTGCAGCAACCATATGTGGGTGATAGGTGCCAAGGCAACTGGGTTGTTGTNAACTTAGGTGATAGTTCTCATCGTGNATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACNTTCAGGGACAAATTGACATGAATCAAATGAAATGTCATCAACTGTTGTTAGGTCCTTCTCATGAATGGAAAAAAAAAA] [+] EMBL BI807338 [TNNCGGTCCCATTCCATGATGCTACCAGAGCAGTAGGATNAATGATCAGTTGCCAGTTGTATTGGCATATGACCCTTGGGGCACAGAATTCGAATTGAATATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCCGGNCAAGAATAATAATCTGCTACGTGCACATTGACAGNCCTTTTGTTTATCAAGCCTGAAAATTTTGTATTGGCGCTGCAGCAACCATATGTGGGTGATAGGTGCCAAGGCAACTGGGTTGTTGTNAACTTAGGTGATAGTTCTCATCGTGNATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCATGATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTCAACTTCCAACNTTCAGGGACAAATTGACATGAATCAAATGAAATGTCATCAACTGTTGTTAGGTCCTTCTCATGAATGGAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10159#0 GAGAGAGAAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAATGGCCGCGGCGGCGCGGG 60 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 AGGAGGAGGAGGCGTCGACGGCGGCGAGGAGCCGGCAGGAGAGCGAGGGGGAGGAGGAGG 120 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 AGGTGATGGCGGTGCTGGACTTCGACATGCTGTGCGCCTCGGTGGCGCTGGCGGCGGAGA 180 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 GGAGGAAGGATTCGGCCGCGGCGGCGGCGGCCACGGTGGAGGCCGGTGGTGGAGGAGGCG 240 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 GAGGAGGAGGAGGAGGGGTGCAGAGGATGTGGGAAGGGGACGTGGTGCTGGATTGCTTGG 300 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 AGGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCGGCAAGAACA 360 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGTAAGGATAACACTCT-CACCATCA 419 consensus_10159#1 ------------------------------GGGAGGNNAGGATAACACTCTACACCATCA 30 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ----------------------------------------------CATGGACTGAGGAG 14 consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TATGTCCATATTCGTCCATTTCTACCTGTACTTTTTCTTTGAAAAGATTCTGGTCAAAAA 479 consensus_10159#1 TATGTCCATATTCGACCATTTCTACCTGNNCTNTTNCTTTGAAAAGATTCTGGTCAAAAA 90 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 TAGAAATAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACT 74 consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 CTGCTCTCGAGGTAAACATGTAAAACCACCTGAGGTTACTTGCTATTGCTATTGATAGGA 539 consensus_10159#1 CTGCTCTGGGGGTAAACATGTNAAACCACCTGAGGTTACTTGCTATNGNTATNGATAGGA 150 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 TAGCTCTGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCA 134 consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 ACTAGGAAAACCTCCTATTTGGAACATGCTTTGAGTCAATTTTAGAATGTACCATTACCA 599 consensus_10159#1 ACTAGGNAAACCTNCTATTTGNAACATGCTTTGNGTCAATTNTAGAATGTACCATTACCA 210 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 GTTCAATATCAGGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCATC----TCATTT 190 consensus_10159#3 ----------------------AGGAGGC--GATGGCGGTGCTGG-----------ACTT 25 consensus_10159#0 CTGGTGAATATTATTACACCGAATAGATTTTTTCATCACTGATGTATTGCCTATTAGGGC 659 consensus_10159#1 CTGNNGANTATTATTACACCGNATAGATTTTTTCATCACTGATGTNTTGCCTATTANGGC 270 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 GTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATA-AATAATGTCCAGTGC 249 consensus_10159#3 CGACATGCTGTGCGC----CTCGGTGGCGCTGGCGGCGGAGAGG-AGGAAGGATTCG-GC 79 consensus_10159#0 TGAGAAAAAAATGTTTGTTGTGTACTTGTGTATTTTGAACTGTGCATTTCTGTATTTTTA 719 consensus_10159#1 TGAGAAAAAAATGTTNGGTGTGTACTTGNGTACTTTGAACTGNGCANTNCTGTATTNTTA 330 consensus_10159#4 -------------------TNNCGGTCCCATTCCATGATGCTACCAGAGCAGTAGGATNA 41 consensus_10159#2 GGTGTCTGGCATGGGCGGGGTG-ATACCATTT--GTTTAGGAAGCAACGGTGAAGGAAAT 306 consensus_10159#3 CGCGGCGGCGGCGGCCACGGTGGAGGCCGGTG--GTGGAGGAGGCGGAGGAGGAGGAGGA 137 * * * * * consensus_10159#0 CCTTCTTGCTTCTTTCTTTAGTTTACATGTAATCTACAAGCCATAGGTTTATGTTGTAAT 779 consensus_10159#1 CCTTATTGCTTCCTTCTTTAGTTTACATGNNATNTACAAGCCATAGGATTATGTTGTNAT 390 consensus_10159#4 A-TGATCAGTTGCCAGTTGTATTGGCATATGACCCTTGGGGCACAGAATT-CGAATTGAA 99 consensus_10159#2 AAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATC-TCCTGAGGTGTG 365 consensus_10159#3 GGGG------------TGCAGAGGA-------TGTGGGAAGGGGACG-TGGTGC--TGGA 175 * * * * * consensus_10159#0 TTCTCTTGTTATACCACTGACAGTTTCTTGAA-ATGCGGGCCCTTATCAGCA-AAGTCGT 837 consensus_10159#1 TTCTCTTGTTATACCACTGACAGGTNCTTGAA-ATGCGGGCCCTTATCANCA-AAGTCGN 448 consensus_10159#4 TATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCCGGNCAAGAATAATA-ATCTGCT 158 consensus_10159#2 TGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGATCT 425 consensus_10159#3 TTGCTTGGA-GGACAGGCGAATCGCGCTCGAGGCCGCGTGCTGCCCATGCTACAGGTTCG 234 * * * * * consensus_10159#0 CCTTTC-CAT----AGTCCTATCCTTGAGTTG---TTAATGCAGGACATGTTTGAC---- 885 consensus_10159#1 NCTTTC-CAT----AGTCCTATCCTTGAGTTG---ATAATGCAGGACATGNTTGAC---- 496 consensus_10159#4 ACGTGCACAT----TGACA-GNCCTTTTGTTT---ATCAAGCCTGAAAATTTTGTA---- 206 consensus_10159#2 ACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAAAT 485 consensus_10159#3 GCAAGAACATGCGGAGAGCCAATCTTGGATCTTGCTTCCTTCAGGCCATGGTGTAC---- 290 * ** ** * * consensus_10159#0 --TTGTCAATGTGT--GCTACATTTGCTTACACAATTATGTATGTCTGTGGCATGTCTTA 941 consensus_10159#1 --TTGNCAATGTGN--GCTACATTAGCTTACACAANTATGTATGNCTGNGGCATGNCTTA 552 consensus_10159#4 --TTGGCGCTGCAGCAACCATATGTGGGTG-ATAGGTGCCAAGGCAACTGGGTTGTTGTN 263 consensus_10159#2 TCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGAC-TGTCCGGCAAGAAA-ATA 543 consensus_10159#3 -TTAGTTTCTTTAGTGGCTATTCTGGTTAGCCTAATCGCCT-TTTCTGTCACAAGGCATA 348 * * consensus_10159#0 AACCTAGTCAGCCTGATAAGCATCATGCTTTTTTTATTTCAAATTGTGATTCATTCTGTA 1001 consensus_10159#1 AACCTAGNCANCCTGATAAGCATCATGCTNTNNTTATTTCAAATTGAGATTCATTCTGTA 612 consensus_10159#4 AACTTAGG-----TGATAGTTCTCATCGTGNATTTGGTTTTATTTAGTCTCAAGTCGGTA 318 consensus_10159#2 ATCTGTACTGCAATTACAGGGCCTG---TTTGTTGTATCAAGCCTGAAAATTTGTATTGG 600 consensus_10159#3 ATATATATTTGTAT-ATGGGACTTA-GCTCTGTTCTCTTGA---TAGCAATCTATACTGG 403 * * * * * * * * consensus_10159#0 TAGGATAAGTTCTAGTGAGATGTTCTTTACTTATATTATATGGTACTGTGAATCAGACTG 1061 consensus_10159#1 TAGGATAAGTTCTAGTGAGATGNTCTNTACTTATATTATATGGTACTGGGNATCAAACTG 672 consensus_10159#4 T---CTATATTATATCATGATGCTCAAGGCTTATG----ATGAATCCAAGTGTAAATTTT 371 consensus_10159#2 CGCTGGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTA 660 consensus_10159#3 T--TACTTCCGAAGAAGAATCAGGAAGCAGTTCAATATCAGGGGCACTGATAGCAGTCTA 461 * * * * consensus_10159#0 CACGTTGGACTTGCCAATAT--TTTACTCATTTAATAGCCATTT-CAGTC--TTGAAATA 1116 consensus_10159#1 CACGGTGGTCTTGCCAATAN--TTTACTCATNTAATAGNCATTTTCAGTC--TTGAAATA 728 consensus_10159#4 TCTGGCTGTTACAT-AGTGT--TTCAA-CTTCCAACNTTCAGGGACAAA---TTGACATG 424 consensus_10159#2 GGTGATAGTTCTCATCGTGT-ATTTGGTTTTATTTAGTCTCAAGTCGGTATCT----ATA 715 consensus_10159#3 CATGACTGTGTTCTCCATCTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACG 521 * * * ** * * * consensus_10159#0 CTAAATATAAATTGCTATCT-CAGTTCTTATGTAAAAAATGTTATTGGAATTTATTGCAT 1175 consensus_10159#1 CTAAANATAAANTGCTATCT-CAGTTCTTATGTAAAAAA-GGTATNGGAATGNATTGCAT 786 consensus_10159#4 AATCAAATGAAATGTCATCAACTGTTGTTAGGTCCTTCTCATGAATGGAAAAAAAAAA-- 482 consensus_10159#2 TTATATC----ATGATGCTCAAGGCT--TATGATGAATCCA-AGTGTAAATTTTTCTGGC 768 consensus_10159#3 TTGGAGAT-AAATAATGTCCAGTGCTG-TGTCTGGCATGGGCGGGGTGATACCATTTGAT 579 * * * * * * consensus_10159#0 CACTCTATATTACATATGTGCATCAATTTTCTTGAAATTATCCTTTGTTCATAAATCTGA 1235 consensus_10159#1 CACTCTATATTACATAAGGGCATCAAATTTCTTGAAATATACCTTTGCTCNTAAATCTGA 846 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 TGTTACATAGTGTTTCA------------------------------------------- 785 consensus_10159#3 AACGAAGCAACGGTGAATGAAATAAGGCTT------------------------------ 609 consensus_10159#0 CAGAAGATTAAAATTGTTTCAGGCCATGGTTTACTTAATTTCTTTAGTGGCTATTCTGGT 1295 consensus_10159#1 CAGAANATTAAA-TTGGTTTAGGCCATGGCTTACTTA----------------------- 882 consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TAGCCTAATCGCCTTTTCTGTCACAAGGCATAATATATATTTGTATATGGGACTTAGCTC 1355 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TGTTCTCTTGATAGCAATCTATACTGGTTACTTCCGAAGAAGAATCAGGAAGCAGTTCAA 1415 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TATCAGGGTACGTATTTCTTGGCATTACCATTTTTCATTTAAAGCATTGAAACAGGTTGT 1475 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TATTGTGCAGCCTAGTATTAGTGCTTAACTGCTTAATGCAGTTGGTTGTCTCTTCTTTTC 1535 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 ATTTGCATCACACAGTATGGCTATGAATGCTTAACTCAAACAAATGAAAACTAAATCCTG 1595 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 CTGGTCTTGATAGTTTGGACTTTGGATACCTGCCATAGTTATGTTGTCAACATACGGGTA 1655 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 GATATAAATATGAGCACTTCAATTTAGGAATTGCCAAGCACAAAGTTTGGAGAAAATCCA 1715 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 GCCATCTCATTGACTGTCTTTTTTTGTGATTAAGCTGATTGTGCACCTTCGTTTCTTTTC 1775 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 CTTGACTTTTTTTTCCTGATACAGGGCACTGATAGCAGTCTAGATGACTGTGTTCTCCAT 1835 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 CTCATTTGTCCTTGCTGTACGCTATGCCAGGAGGCTCGGACGTTGGAGATAAATAATGTC 1895 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 CAGTGCGGTGTCTGGCATGGGCGGGGTGATACCATTTGTTTAGGAAGCAACGGTGAAGGA 1955 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 AATAAGGCTTTTGCTGCTCTACACAAGTCCTCTTTTGTGCCTATAAAATCTCCTGAGGTG 2015 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 TGTGGCATGGACAGAACATCAAATGGTGCTAATGAGCATGAACCACTCGTCCCATCAGAT 2075 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 CTACCAGAGCAGTAGGATAATAGCAGTTGGCAGTTGTATTGCATATACCCTTTTGCACAA 2135 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 ATTCGAATTGAAATGGTGAAAATTCTCAAGAGAATTGGTGGACTGTCCGGCAAGAAAATA 2195 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 ATCTGTACTGCAATTACAGGCCTGTTTGTTGTATCAAGCCTGAAAATTTGTATTGGCGCT 2255 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 GGCAGCAACCATATGTGGGTGATAGGTGCAAGTGCAACTGGGTTGTTGTAAACTTAGGTG 2315 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 ATAGTTCTCATCGTGTATTTGGTTTTATTTAGTCTCAAGTCGGTATCTATATTATATCAT 2375 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 GATGCTCAAGGCTTATGATGAATCCAAGTGTAAATTTTTCTGGCTGTTACATAGTGTTTC 2435 consensus_10159#1 ------------------------------------------------------------ consensus_10159#4 ------------------------------------------------------------ consensus_10159#2 ------------------------------------------------------------ consensus_10159#3 ------------------------------------------------------------ consensus_10159#0 AACTTCCAACTTTCAGGGACAAATTGACATGAATCAAATGA 2476 consensus_10159#1 ----------------------------------------- consensus_10159#4 ----------------------------------------- consensus_10159#2 ----------------------------------------- consensus_10159#3 ----------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||