These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10161#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1495 fasta sequence [CCTTGTCCCCCACCTCCTTTACTTGAGCTTGCTCACCACTGCCTCCATATACAGAGAGTCTTCTCTGTATTTCTCTCTCTCAGTGGGAGGCTCACAAGAATCTTTCAGCTCACATCTCACTGTCCTTGCCTTTCTCTAGCTAGGGAGGTCCAAGAACAGAGCAGCAGGATGGTGCAGTGGCGTTTCTAGAGAGCAGCATGAGTACTCGCACCACCGAGCTGGGATGGTCGGCGATGGCGAACACCGATGCAGCCGCCGCCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCCATCCTCCTCGCCTACGTCCGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGGATGAACCGCCCCCTCCACCGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTCCGCCCGGGGATCAAGAAAGGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTCCAGGCCAAGCACGGCAACAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCGAAGCGGCTGGGCAAGTGGTGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGATCGGGATCGCCGGCGACTCCCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGGCGATACGACTGGCTCCTCGAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGAATGATGGCTGCCCCGATCCTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCGCCGTCGGTGACGCTTAGCCTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCGCCGACGTGGGGTGGTGGTGGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGCAGGGAGATGGAGGAAGGGCAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCGAGG-CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGG-TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC-CAAGGAGCAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC-GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGC-GGCCCCGGCGGCGGCCGGTGAGCCGCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCACCAAATTGCAAACCAAAATGGTTACAAAAAAAAAAAAAA] [+] EMBL AB064519 [CCTTGTCCCCCACCTCCTTTACTTGAGCTTGCTCACCACTGCCTCCATATACAGAGAGTCTTCTCTGTATTTCTCTCTCTCAGTGGGAGGCTCACAAGAATCTTTCAGCTCACATCTCACTGTCCTTGCCTTTCTCTAGCTAGGGAGGTCCAAGAACAGAGCAGCAGGATGGTGCAGTGGCGTTTCTAGAGAGCAGCATGAGTACTCGCACCACCGAGCTGGGATGGTCGGCGATGGCGAACACCGATGCAGCCGCCGCCGATGAGGGAGAGGCAGCGGTGGCGGCCTGAGGAAGACGCCATCCTCCTCGCCTACGTCCGCCAGTATGGGCCCCGGGAGTGGAGCCTCGTGTCCCAGCGGATGAACCGCCCCCTCCACCGCGACGCCAAGTCCTGCCTCGAGCGCTGGAAGAACTACCTCCGCCCGGGGATCAAGAAAGGTTCGCTCACCGACGACGAGCAGCGCCTCGTCATCCGCCTCCAGGCCAAGCACGGCAACAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGGACGGCGAAGCGGCTGGGCAAGTGGTGGGAGGTGTTCAAGGAGAAGCAGCAGCGGGAGCTCCGGGATCGGGATCGCCGGCGACTCCCGCCGCCGCTGGACGGCGACGAGCGCGGCTGCGCCGGCGGGCGATACGACTGGCTCCTCGAGGACTTCGCCGACAAGCTCGTCAACGACCACCACCGCCGAATGATGGCTGCCCCGATCCTCCCGCCGTGGATGTCGTCGTCGCCGTCGTCTTCTTCCTCGCCGTCGGTGACGCTTAGCCTCGCGTCGGCGGCGGTGGCGCCGGCGCCTGCGGCGCCGCCGCCGACGTGGGGTGGTGGTGGAGGAGGGGAGGTGGTGGTGGCGGAGTTGATGGAGTGTTGCAGGGAGATGGAGGAAGGGCAGAGGGCGTGGGCGGCGCACAGGAAGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCGAGG CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC CAAGGAGCAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGC GGCCCCGGCGGCGGCCGGTGAGCCGCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCACCAAATTGCAAACCAAAATGGTTACAAAAAAAAAAAA ] [+] EMBL OS1321630 [ AGGAGGCGGCGTGGAGGATGAAGAGGGTGGAGATGCAGCTGGAGACGGAGAGGGCGTGCCGGCGGCGGGAGGCGACGGAGGAGTTCNAGG CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCNACGCGTNGGC CAAGNAGCAGAAGATGGCGGA CAGTTGGCGGCCAA ] [+] EMBL AU161797 [ GGGAGGCGACGGAGGAGTTCGAGG CGAAGATGAGGGCGCTGAGGGAGGAGCAGGCAGCTGCGGTTGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCNNGACGC GAGGC NAAGGAGCAGAAGATGGCGGA NAGTGGGCGGCCAAGCACGCCCGTNTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCNGNC GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGG ] [+] EMBL BM420710 [ agcgncCGGAGGAGTTCGAGGCCGAAGATGAGGGC CTGA GGAGGA CAAGCA CT CGN TGGACCGGGTGGA GCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC CAAGGAGCAGAAGAT GCGGACAAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTC CCGCCTGCCGCCAGCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGCAGGCCCCGGCGGCGGCCGGTGAGCCCCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTG CTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCAaaaaaaaaa ] [-] EMBL CB966205 [ AGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGCACAAGGAGCAGAAGATGGCGGAGCAGTGGCAGGCCAAGCACGCCCGCCTCGCCAAGTTCATCGACCAGATCGCCGCCTcaccc ] [-] EMBL CB965674 [ AGGAGCAGGCAGCTGCGG TGGAGCGGGTGGAGGCGGAGTACCGGGAGAAGATGGCCGGCCTCCGCCGCGACGCGGAGGC CAAGGAGCAGAAGATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC ] [+] EMBL AU223263 [ GGGTGNAGGCGGAGTACCGGGANAAGATGGCCGGCCTCCNCCGCGACGCGGAGGC CAAGGAGCAGAANATGGCGGAGCAGTGGGCGGCCAAGCACGCCCGCCTCGCCAAGTTCCTCGACCAGGTCGCCGCCTGCCGCC GCTGGCCGCCCGTAGAGATCAACGGCGGCGGCGGCGGC GGCCCCGGCGGCGGCCGGTGAGCCNCCGGACGGTGGCGCTGCATGCATGCGTAGTTGGACACCTCGCTTTCTTGCTTCTTCTTCTCGTGTCCTTTTTACAACTGTTGGAATTCACTTCTCTCTAGAAATATGTAATCTTTTGAGTCTCTTTTGATCATTCCAAGTTTCCTACTAGTAGCTCTATTGAATAATAAATGGACCNCCAAATTGCAAACCAAAATGGTTTCAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||