These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10176#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1523 fasta sequence [CGTAGGTCGCGGAGACCAACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGCGTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAGAGATACTTCAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATA-CTACATTTACGAATTATTAAAGGCACTAGATTATTGTCATTCACGAGGCATCATGCATCGAGATGTCAAACCTCACAATATCATGATTGATCATGAGAAACGCCAGC-TTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAGATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGATTTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCACTTTCATCCCCAAAAAAAAAAGGAG] [+] EMBL AK120812 [CGTAGGTCGCGGAGACCAACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGTGCGTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAAAGATACTTCAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATA CTACATTTACGAATTATTAAAGGCACTAGATTATTGTCATTCACGAGGCATCATGCATCGAGATGTCAAACCTCACAATATCATGATTGATCATGAGAAACGCCAGC TTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAGATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGATTTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCAC ] [+] EMBL CB649837 [ AACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCACCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCATGATGGGTACGAGGTGCTGCTCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGCGTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAAAGATAAAGAGGGAAATAGAGATACTTCGAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATACCTACATTTACGAATTATTACAGGCACTAGATTA ] [+] EMBL CB648388 [ AACCCACCCATCCCTCGCGCCGGAAGAGAGGTACATGGCCTGGTGCGCCGCGCGCAGCCGCCTCCTCCCCCTCGCCACCGCGCCGCAGCTGCTCCGCCGCCTCCTCCTCTCCTCCGCTGCGGCCCCGCGCTACGCGCACCCCCACCACCACCACAGCAACAGCCGCCGCCGCCGCCGCCCCCTCGCCCCCAGCGTCTACGCCGCTGCCGCGGCAGCCGCAGCCGAGGCGCCGCTCCCCATGCCGCCGCGCATCGGCCGCGCCACGCGGCACCCCGGGGGCGCCGCCTCCGTGGCGCGCGTCTACGCCGACGCCAACTCCCAGCGGCCCAAGGAGTACTGGGACTACGAGTCGCTCGACATCGAATGGGGGGAGCAGGATGGGTACGAGGTGCTGCGCAAGCTTGGGAGGGGGAAGTACAGCGAGGTGTTCGAGGGATTCCGGCCCGGGGGTGACGAGAGGAGCCTTATTAAGATCCTCAAGCCCGTCAAGAAGAAAACGATACAGAGGGAAATAGGGATACTTCAAAACTTATATGGCGGACCGAATATTGTAAAGCTACTTGATGTTGTCAGGGATGATGAATCGAAGACACCTAGTTTGATCTTTGAATATGTCAACAATACTGATTTCAAAGTACTCTACCCAACACTATTGGATTACGATATCAGATA CTACATTTACGAATTATTAAAGGCACTAGATTATTGTCATT ] [-] EMBL CB649838 [ TTGATCATGAGAAACGCCAGCTTTTGTCTTATTGATTGGGGTCTAGCAGAGTTCTATCATCCCAAGATGGAATATAATGCTAGAGTTGCTTCAAGATCTTATAAGGGCCCTGAACTTCTTGTGGATTTGCTAGATTATGATTACTCGTTGGATTTGTGGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTTTCAAAGATAATTCATCT ] [-] EMBL CB648389 [ GGAGCCTTGGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTGCACTTTCATCCCCAAAAAAAAAAGGAG] [+] EMBL CB673752 [ GGTTGCATGTTTGCCGCAATGATATTCCGAGTCGACCCTTTCTTTAATGGTCAGGATAACTACGACCAATTAGTCAAAATTACCGAGGTTCTTGGAACAGAAGATTTCTACAATTACCTTGAAAAGTATGGTCTTGAGCTTGACCCGCAGCTTGAAAGACTTGTTGGAAGACATAATAGGAAGCCATGGTCAATGTTTGTTAACTCGGGGAACAGACACCTAGCAAGCCCTGAGGCTATTGATTTTGTAGACAGGTTGCTTCGCTACGATCACCAGGAAAGGCCTACAGCAAAGGAAGCCATGGCTCATCCATATTTCAATCCAGTGAGAAGCACTTAAAACGGCAGGAAGAGTGCCCAATAGTGGTATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTAATTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTG ] [+] EMBL AA749690 [ TATGCGGCATATTTGACAATTTTTGCTACGGTGTCAAATATATAGAGGGAATTTAATTTTCAAGGCTGTATGGTTTATCCAGAATAAATCCTTGACCAACATGTAACCGTCACATCATTTGTGTGAATTGGTTCATTCCTCTCTGCTAACTTGTTTTATGATCAGTTTTTATCAATAATAATTCATCTCTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||