cluster # 10190

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10190 cluster # 10190 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10190#0 length = 1857 sequences # 3

consensus_10190#1 length = 1644 sequences # 3
consensus_10190#2 length = 482 sequences # 1

consensusID : consensus_10190#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1857
fasta sequence

                              [GTCAATAGGAGAGAAGAGGAGCGTCGTCGAGTTTGAAATCTCAACTCGCAAACCCCCACACTACTTTTTCTTCGTCTATTATATCCCAACACAACACAAGGTGAAGCTACTCCTAGGCGAGAGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGCCTTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCGACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCGCCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGATCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCGCCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCGGCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACACCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGGTCAACCCCTACCCCTACTTCAGCTACAACAATCAGACGCTGGACTACGCCCTCTTCCGCCCCAACCGCGGCGTTTACGACCCCAACACCAAGCTCAACTACACCTCCATGTTCGACGCCCAGATGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCGGGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGGCCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTGGTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCCTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGCTCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAAC]

[+] EMBL AK102883             [GTCAATAGGAGAGAAGAGGAGCGTCGTCGAGTTTGAAATCTCAACTCGCAAACCCCCACACTACTTTTTCTTCGTCTATTATATCCCAACACAACACAAGGTGAAGCTACTCCTAGGCGAGAGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGCCTTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCGACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCGCCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGATCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCGCCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCGGCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACACCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGGTCAACCCCTACCCCTACTTCAGCTACAACAATCAGACGCTGGACTACGCCCTCTTCCGCCCCAACCGCGGCGTTTACGACCCCAACACCAAGCTCAACTACACCTCCATGTTCGACGCCCAGATGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCGGGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGGCCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTGGTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCCTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGCTCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAAC]
[+] EMBL AK059271             [                                                                                                                     CGAGAGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGCCTTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCGACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCGCCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGATCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCGCCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCGGCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACACCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGGTCAACCCCTACCCCTACTTCAGCTACAACAATCAGACGCTGGACTACGCCCTCTTCCGCCCCAACCGCGGCGTTTACGACCCCAACACCAAGCTCAACTACACCTCCATGTTCGACGCCCAGATGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCGGGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGGCCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTGGTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGCTC                                                       ]
[+] EMBL AU069982             [                                                                                                                                       ATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCNTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACNACGGCGCCAACGCCGACAACCTCCCTCCGCCCGAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGCCTTCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_10190#0
GTCAATAGGAGAGAAGAGGAGCGTCGTCGAGTTTGAAATCTCAACTCGCAAACCCCCACA
CTACTTTTTCTTCGTCTATTATATCCCAACACAACACAAGGTGAAGCTACTCCTAGGCGA
GAGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCG
CCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGA
TGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGG
CGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGG
CCTTCATCTCCGCCTTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCG
ACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCG
CCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGA
TCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCG
CCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCG
GCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACA
CCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGGTCA
ACCCCTACCCCTACTTCAGCTACAACAATCAGACGCTGGACTACGCCCTCTTCCGCCCCA
ACCGCGGCGTTTACGACCCCAACACCAAGCTCAACTACACCTCCATGTTCGACGCCCAGA
TGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCG
GGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGG
CCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCA
TGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCG
GACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACC
TCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCAC
CTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTG
GTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTA
AGCCGATACAAAGTGGTGGCGCATGCCTTGATCCGAACAACGTGCAGTCCCATGCTGCAT
TTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGG
GCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGAC
GGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAG
GCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTC
TCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACT
CTCGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGC
TCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAAC

consensusID : consensus_10190#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1644
fasta sequence

                              [AGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGCATTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCGACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCGCCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGATCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCGCCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCGGCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACACCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGATGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCGGGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGGCCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTGGTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCGTAGCAC-CGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTC-AATTCTT-GCTCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAACTTATCATTCCATTCTTCTATTCTATGTAGAA]

[+] EMBL AK100931             [AGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGCATTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCGACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCGCCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGATCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCGCCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCGGCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACACCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGATGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCGGGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGGCCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTGGTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCGTAGCAC CGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTC AATTCTT GCTCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAACTTATCATTCCATTCTTCTATTCTATGTAGAA]
[+] EMBL AU093676             [                          ACCTTCACCCACCAATGATGAAGATGCTCCTCGCCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGATGGCGGTGGGCGTCAACTACGGCGCCAACG CGACAACCTCCCTCCGCCCAAGGACGTGGCGGCCTTCCTCGCCGCGCACACCACCATCGACCGCNTGAAGCTGTTCGACGCCAACCCGGCCTTCATCTCCGGNTTCGNCAACACACCCATCTtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB096405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCCAAGGCTGGTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGNCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCGTAGCACAGGGGGAATGAACCTATTAAAANTGNGTATCCGGTATCAGTCAAATTCTTGGCTCATGTTTGGCTTTACCGCAGTTTTCTCATTGGGNAGGGAAATCATTTGGGCTTAACTTATCA                         ]




>consensus_10190#1
AGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCGC
CGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGAT
GGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGGC
GGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGGC
CTTCATCTCCGCATTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCGA
CCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCGC
CAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGAT
CCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCGC
CCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCGG
CATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACAC
CAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGATGGA
CGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCGGGGA
GGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGGCCAG
GGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCATGCC
CAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCGGACC
CATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACCTCGG
CCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCACCTAA
CCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTGGTGC
GAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTAAGCC
GATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGT
GATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCAC
CGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGA
CGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTT
AAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTG
CTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACTCTCG
TAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGCTCAT
GTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAACTTATCAT
TCCATTCTTCTATTCTATGTAGAA

consensusID : consensus_10190#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence

                              [TGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTNATGAATGCCTTNTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTANAAGAGCTATACTATTCATTACTCTNGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGCTCATGTTTGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU093675             [TGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCATTTGTNATGAATGCCTTNTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTANAAGAGCTATACTATTCATTACTCTNGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGCTCATGTTTGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10190#2
TGCCTGTGGCTATGTGGACTGTAAGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAA
CAACGTGCAGTCCCATGCTGCATTTGTNATGAATGCCTTNTACCAGGCCAACGGGCGGCA
CGACTACGATTGCGACTTCAAGGGCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGG
GAGCTGCAAATACGTCTCCTGACGGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGC
ACCAACCTCGAGTCTACCTCCAGGCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACT
GCCTGGCTTGCGCCTAATTTTTCTCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTA
NAAGAGCTATACTATTCATTACTCTNGTAGCACCGGGGAATGAACCTATTAAAATTGTGT
ATCCGTTATCAGTCAATTCTTGCTCATGTTTGGCTAAAAAAAAAAAAAAAAAAAAAAAAA
AA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10190#0      GTCAATAGGAGAGAAGAGGAGCGTCGTCGAGTTTGAAATCTCAACTCGCAAACCCCCACA 60
consensus_10190#1      ------------------------------------------------------------
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CTACTTTTTCTTCGTCTATTATATCCCAACACAACACAAGGTGAAGCTACTCCTAGGCGA 120
consensus_10190#1      ------------------------------------------------------------
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      GAGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCG 180
consensus_10190#1      -AGAATCTGAGAGAGATGAGATGAGAAACCTTCACCCACCAATGATGAAGATGCTCCTCG 59
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGA 240
consensus_10190#1      CCGCCCTCGTCGTCGTCGCCGCCGCCTCCTTCAGGGCGGCCGAGGCGGCGCTCCCGTCGA 119
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      TGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGG 300
consensus_10190#1      TGGCGGTGGGCGTCAACTACGGCGCCAACGCCGACAACCTCCCTCCGCCCAAGGACGTGG 179
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGG 360
consensus_10190#1      CGGCCTTCCTCGCCGCGCACACCACCATCGACCGCGTGAAGCTGTTCGACGCCAACCCGG 239
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CCTTCATCTCCGCCTTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCG 420
consensus_10190#1      CCTTCATCTCCGCATTCGCCAACACACCCATCTCCCTCGCCGTCTCCCTCCCCAACTCCG 299
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      ACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCG 480
consensus_10190#1      ACCTCCCTTCCCTCGCCGACAAGCAGACCGGCCTCGACACCGCCCGCGCCTGGGTCCGCG 359
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGA 540
consensus_10190#1      CCAACCTCTCCCCCTACGTCCCCGCCACCAACGTCACCCTCCTCCTCGCCGGCAACGAGA 419
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      TCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCG 600
consensus_10190#1      TCCTCCTCTCCCCTGACCCCAACCTCGTCCTCTCCCTCCTCCCCGCCATGCGCCGCCTCG 479
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCG 660
consensus_10190#1      CCCAGGCCCTCCGCCTCGAGGGCCTCACCGGAGTCCGCGTCACCACCCCGCACTACCTCG 539
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      GCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACA 720
consensus_10190#1      GCATCCTCGCCCCCTCCGACGGCATCCCATCCAACGCCCGCTTCCGCCCGGGCTACGACA 599
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATGGTCA 780
consensus_10190#1      CCAAGCTCTTCCCTCCCATGCTCCAGTTCCACCGCGACACGGGCTCCCCCTTCATG---- 655
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      ACCCCTACCCCTACTTCAGCTACAACAATCAGACGCTGGACTACGCCCTCTTCCGCCCCA 840
consensus_10190#1      ------------------------------------------------------------
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      ACCGCGGCGTTTACGACCCCAACACCAAGCTCAACTACACCTCCATGTTCGACGCCCAGA 900
consensus_10190#1      -----------------------------------------------------------A 656
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      TGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCG 960
consensus_10190#1      TGGACGCCATCTACACCGCCATGAAGCGCCTCGGCTACGGCGACGTCGACATCGCCGTCG 716
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      GGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGG 1020
consensus_10190#1      GGGAGGCCGGGTGGCCCACGCAGGCGGACCCAGGGCAGGTGGGCGTCGGCGTGGAGGAGG 776
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCA 1080
consensus_10190#1      CCAGGGACTTCAACGAGGGGATGCTCCGCGTCGTCAGCAGCGGCAAGGGCACCCCGCTCA 836
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      TGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCG 1140
consensus_10190#1      TGCCCAACCGCAAGTTCGAGACCTACATCTTCTCCCTCTTCGACGAGAACCAGAAGCCCG 896
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      GACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACC 1200
consensus_10190#1      GACCCATCGCCGAGAAGCACTTCGGCATCCTCAACCCGGATTTCACCCCCATCTACGACC 956
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      TCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCAC 1260
consensus_10190#1      TCGGCCTCCTCCGCCAATCCTCCGATTCTGGAGCTCCAAACCCTTCGCCGAATCCATCAC 1016
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      CTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTG 1320
consensus_10190#1      CTAACCCTAGTCCGAAACCCGCTCCTTCTGGTGGAGGGAAGTGGTGTGTCCCTAAGGCTG 1076
consensus_10190#2      ------------------------------------------------------------
                                                                                   

consensus_10190#0      GTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTA 1380
consensus_10190#1      GTGCGAGTGATACTGACTTGCAGAACAACATTAACTATGCCTGTGGCTATGTGGACTGTA 1136
consensus_10190#2      -------------------------------------TGCCTGTGGCTATGTGGACTGTA 23
                                                            ***********************

consensus_10190#0      AGCCGATACAAAGTGGTGGCGCATGCCTTGATCCGAACAACGTGCAGTCCCATGCTGCAT 1440
consensus_10190#1      AGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCAT 1196
consensus_10190#2      AGCCGATACAAAGTGGTGGCGCATGCTTTGATCCGAACAACGTGCAGTCCCATGCTGCAT 83
                       ************************** *********************************

consensus_10190#0      TTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGG 1500
consensus_10190#1      TTGTGATGAATGCCTTCTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGG 1256
consensus_10190#2      TTGTNATGAATGCCTTNTACCAGGCCAACGGGCGGCACGACTACGATTGCGACTTCAAGG 143
                       **** *********** *******************************************

consensus_10190#0      GCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGAC 1560
consensus_10190#1      GCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGAC 1316
consensus_10190#2      GCACCGGCGCGGTCACCTCCAATGACCCTAGCTACGGGAGCTGCAAATACGTCTCCTGAC 203
                       ************************************************************

consensus_10190#0      GGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAG 1620
consensus_10190#1      GGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAG 1376
consensus_10190#2      GGGACGCAGCAAGCCATGGCAGTGCAGGTGCAGCGGCACCAACCTCGAGTCTACCTCCAG 263
                       ************************************************************

consensus_10190#0      GCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTC 1680
consensus_10190#1      GCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTC 1436
consensus_10190#2      GCTTAAGTCACGGAAGCGCTGGAGGGTTGCTAATACTGCCTGGCTTGCGCCTAATTTTTC 323
                       ************************************************************

consensus_10190#0      TCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACT 1740
consensus_10190#1      TCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTAGAAGAGCTATACTATTCATTACT 1496
consensus_10190#2      TCTGCTCTTGTCTGACAGCAGCCATGCTTCTTTCTTANAAGAGCTATACTATTCATTACT 383
                       ************************************* **********************

consensus_10190#0      CTCGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGC 1800
consensus_10190#1      CTCGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGC 1556
consensus_10190#2      CTNGTAGCACCGGGGAATGAACCTATTAAAATTGTGTATCCGTTATCAGTCAATTCTTGC 443
                       ** *********************************************************

consensus_10190#0      TCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAAC--- 1857
consensus_10190#1      TCATGTTTGGCTATACCGCAGTTTTCTCATTGTGTAGTGAAATCATTTGTGCTTAACTTA 1616
consensus_10190#2      TCATGTTTGGCTAAAAAAAAAAAAA---AAAAAAAAAAAAAA------------------ 482
                       ************* *    *        *      *   ***                  

consensus_10190#0      ----------------------------
consensus_10190#1      TCATTCCATTCTTCTATTCTATGTAGAA 1644
consensus_10190#2      ----------------------------