These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10204#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 782 fasta sequence [TCTCCTCTCCTCTCCTCTCGCGACTTCGCGGCGGC-TCG-CTCGCCTGATCCAT-CCGTGTC-TCGCGCGGCGGCGCCATGGCGGGGGAGGCTTCGCCGCCCGCGCCACCGGAGATCCCCACGAGGTGCCACCACTGCGCCGGCCCCCTCTCCAAGGACATGGAAACGAGCAGCTGGACGGTGCCTCCACTGGTTCGAGATAGCTTCTCCATGATTGGTTCTGCTATTGGGGGTACAGCTGGAGCATTTTATGGTTTCAACCACACTATGCCTTTTGTTCGACGGTACATAAAAGGGCCAATGTGGATGCA-TTTTCTTGTTGGTGCACCTCCAGTTATTGTCTTCTCTTCTGCATGTGCTGGGTTAGCAGGTGGGACAATACCAGCGCTTGCACAGCTGGTATCATCATCCTATCACTCAGCCACAGCGTCGTCCTTTGCCCACACAACTTCTCGTGATGAAATGCATAAGGCCAGAAGCTCCTCGACATTGTGATCTACAGTGGCAGCAAATTGTTAACTGGAATCCTAACTATCCAAAACACCATATACTATTATAAATGTGCATGTGTTACCACATATCATCTGTTTTATGAGGAATGCTCTTGTAAATGGTAAAACTTTCCCCTGTGGAATAGTGCTTATATATGTTCCCAATTTTGCTATTTATCACCATGCACAGGCTGTTATTTTTGTTATGGTGTCGCAATAAGCCTGGAGTGTTGCGAATTGTGATCTGCTTTAACCTTCAGGATGCCATTTTCGTTTGCAATATAAAAACACATTA] [+] EMBL AK062518 [TCTCCTCTCCTCTCCTCTCGCGACTTCGCGGCGGC TCG CTCGCCTGATCCAT CCGTGTC TCGCGCGGCGGCGCCATGGCGGGGGAGGCTTCGCCGCCCGCGCCACCGGAGATCCCCACGAGGTGCCACCACTGCGCCGGCCCCCTCTCCAAGGACATGGAAACGAGCAGCTGGACGGTGCCTCCACTGGTTCGAGATAGCTTCTCCATGATTGGTTCTGCTATTGGGGGTACAGCTGGAGCATTTTATGGTTTCAACCACACTATGCCTTTTGTTCGACGGTACATAAAAGGGCCAATGTGGATGCA TTTTCTTGTTGGTGCACCTCCAGTTATTGTCTTCTCTTCTGCATGTGCTGGGTTAGCAGGTGGGACAATACCAGCGCTTGCACAGCTGGTATCATCATCCTATCACTCAGCCACAGCGTCGTCCTTTGCCCACACAACTTCTCGTGATGAAATGCATAAGGCCAGAAGCTCCTCGACATTGTGATCTACAGTGGCAGCAAATTGTTAACTGGAATCCTAACTATCCAAAACACCATATACTATTATAAATGTGCATGTGTTACCACATATCATCTGTTTTATGAGGAATGCTCTTGTAAATGGTAAAACTTTCCCCTGTGGAATAGTGCTTATATATGTTCCCAATTTTGCTATTTATCACCATGCACAGGCTGTTATTTTTGTTATGGTGTCGCAATAAGCCTGGAGTGTTGCGAATTGTGATCTGCTTTAACCTTCAGGATGCCATTTTCGTTTGCAATATATATGCACATTA] [+] EMBL C28026 [ ncagncgGACTTCGCGGCGGC TCG NTCGCNTGATCCAT CCGTTTN TCGCGCGGCGGCG CATGGCGGCNGAGGCTTCG CGCCCGCGCCACCGGAGATCCCCACGAGGTGCCACCACTGCGCCGGCCCCCTCTCCAAGGACATGGAAACNAGCAGCTGGACGGTGCCTCCACTGGTTCGAGATAGCTTCTCCATGATTGGTTCTGCTATTGGGGGTACAGCTGGAGCATTTTATGGTTTCAACCACACTATGCCTTTTNTTCGACGGTACATAAAAGGGCCAATNTGGATGCATTTTTCTTGTTGGTGCAACTCCAGTTATTngt ] [+] EMBL CA758761 [ GCGGCGGC TCG CTCGCCTGATCCAT CCGTGTC TCGCGCGGCGGCGCCATGGCGGGGGAGGCTTCGCCGCCCGCGCCACCGGAGATCCCCACGAGGTGCCACCACTGCGCCGGCCCCCTCTCCAAGGACATGGAAACGAGCAGCTGGACGGTGCCTCCACTGGTTCGAGATAGCTTCTCCATGATTGGTTCTGCTATTGGGGGTACAGCTGGAGCATTTTATGGTTTCAACCACACTATGCCTTTTGTTCGACGGTACATAAAAGGGCCAATGTGGATGCA TTTTCTTGTTGGTGCACCTCCAGTTATTGTCTTCTCTTCTGCATGTGCTGGGTTAGCAGGTGGGACAATACCAGCGCTTGCACAGCTGGTATCATCATCCTATCACTCAGCCACAGCGTCGTCCTTTGCCCACACAACTTCTCGTGATGAAATGCATAAGGCCAGAAGCTCCTCGACATTGTGATCTACAGTGGCAGCAAATTGTTAACTGGAATCCTAACTATCCNAAACACCATATACTATTATAAATGTGCATGTGTTACCACATATCANCTGTTTTATGAGGAATGCTCTTGTANATGGNTAAACTTTCCCCTGTGGAATAGTGCTTATATAann ] [+] EMBL AU081527 [ GGCTTCGNTTCGCCTGATCCATCCCGTGTCTTCGCGCGGCGNCGCCATGGCGGGGG GAGTTCGCCGCCCGCGCCACCGGAGATCCCCACGAGGTGCCACCATTGCGCCGGCCCCCTCTCCAAGGACATGGAAACGAGCAGCTGGACGGTGCCTCCACTGGTTCGAGATAGCTTCTCCATGATTGGTTCTGCTATTGGGGGTACAGCTGGAGCATTTTATGGTTTCAACCACACTATGCCTTTTGTTCGACGGTACATAAAAGGGCCAATGTGGATGCA TTTTCTTGTTGGTGCACCTCCAGTTATTGTCTTCTCTTCTGCATGTGCTGGGTTAGCAGGTGGGACAATACCAGCGCTTGCACAGCTGGTATCATCATCCTATCACTCAGCCACAGCGTCGTCCTTTGCCCACACAACTTCTCGTGATGAAATGCATAAGGCCAGAAGCTCCTCGACATTGTGATCTACAGTGGCAGCAAATTGTTAACTGGAATCCTAACTATCCAAAACACCATATACTATTATAAATGTGCATGTGTTACCACATATCATCTGTTTTATGAGGAATGCTCTTGTAAATGGTAAAACTTTCCCCTGTGGAATAGTGCTTATATATGTTCCCAATTTTGCTATTaaaaaaa ] [+] EMBL CA305638 [ GGCCAATGTGGATGCA TTTTCTTGTTGGTGCACCTCCAGTTATTGTCTTCTCTTCTGCATGTGCTGGGTTAGCAGGTGGGACAATACCAGCGCTTGCACAGCTGGTATCATCATCCTATCACTCAGCCACAGCGTCGTCCTTTGCCCACACAACTTCTCGTGATGAAATGCATAAGGCCAGAAGCTCCTCGACATTGTGATCTACAGTGGCAGCAAATTGTTAACTGGAATCCTAACTATCCAAAACACCATATACTATTATAAATGTGCATGTGTTACCACATATCATCTGTTTTATGAGGAATGCTCTTGTAAATGGTAAAACTTTCCCCTGTGGAATAGTGCTTATATATGTTCCCAATTTTGCTATTTATCACCATGCACAGGCTGTTATTTTTGTTATGGTGTCGCAATAAGCCTGGAGTGTTGCGAATTGTGATCTGCTTTAACCTTCA ] [+] EMBL AU075723 [ ACCATATACTATTATAAATGTGCATGTGTTACCACATATCATCTGTTTTATGAGGAATGCTCTTGTAAATGGTAAAACTTTCCCCTGTGGAATAGTGCTTATATATGTTCCCAATTTTGCTATTTATCACCATGCACAGGCTGTTATTTTTGTTATGGTGTCGCAATAAGCCTGGAGTGTTGCGAATTGTGATCTGCTTTAACCTTCAGGATGCCATTTTCGTTTGCAATATAAAAA ] [+] EMBL AU069817 [ ACCATATACTATTATAANTGTGCATGTGTTACCACATATCATCTGTTTTATGAGGAATGCTCTTGTAAATGGTAAAACTTTCCCCTGTGGAATAGTGCTTATATATGTNCCCAATTTTNCTATTTATCACCATGCACAGGCTGTTATTTTTGTTATGGTGTCGCAATAAGCCTGGAGTGTTGCGAATTGTGATCTGCTTTAACCTTCAGGATGCCATTTTCGTTTGCAATATAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||