These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10220#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1036 fasta sequence [AAAAAAAAAACTCTCCCGAGCTCTCCTCGCCGCCGCCGCCATGTCCGGGTTCGCGCGGCGCCTCGGCGGGATCCCGTGGAGGGAGATCGCCGGGGAAGCCTTCTCCCGCGTCTTCCTCGTCGCGCAGGCCGTCTGCGCCGTCCACGTCGTCAACGCCCACGTCTGCTCCTTCGCGCTGGTGATGGGCCCGAGCATGCTGCCGGCGATGAACCTGGCGGGGGACGTGGTGGCGGTGGACCTGGTGAGCGCGCGGCTCGGGCGGGTGGCGAGCGGCGACGCCGTGCTCCTCGTCTCGCCGGAGAACCCGCGCAAGGCGGTCGTCAAGCGCGTCGTCGGGATGGAGGGCGACGCCGTCACGTTCCTCGTCGACCCCGGCAACAGCGACGCCTCCAAGACCGTCGTGGTACCAAAAGGCCATGTCTGGGTGCAGGGTGATAATATTTATGCTTCTAG-AGATTCAAGACAGTTTGGACCTGTCCCTTATGGTCTAATTACAGGGAAGATCTTTTGTCGGGTTTGGCCACTGAAGGATTTTGGTCCGATAGATCCAATGTCAGCTGAGTAGGGGTAACTCAGCCTTA-TTTTTCTTCTTCACTTATTTTCAGAATCCAGGCCTCTCGCTCTACCTTTATCTCTCCGAGCCGACCTTTTTTTACCCGTTTGCTCCAGAATTTATCGAAGACGGCATGCATATCTTGAGATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAACCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACA-GTGTAACTTTGGTGTACGAAATTTTTAGAACATTATTGAGATAGACCAAAATTTGTAGAACGCTGTTGATTAATTAATCGAAGTCGCCATGTATCA-GAGTTGTTATCGGACAGTGGTAAACGCTTACCGGTTTAATAAGTAGAAACAAAATTCTTGTTT] [+] EMBL AK106677 [AAAAAAAAAACTCTCCCGAGCTCTCCTCGCCGCCGCCGCCATGTCCGGGTTCGCGCGGCGCCTCGGCGGGATCCCGTGGAGGGAGATCGCCGGGGAAGCCTTCTCCCGCGTCTTCCTCGTCGCGCAGGCCGTCTGCGCCGTCCACGTCGTCAACGCCCACGTCTGCTCCTTCGCGCTGGTGATGGGCCCGAGCATGCTGCCGGCGATGAACCTGGCGGGGGACGTGGTGGCGGTGGACCTGGTGAGCGCGCGGCTCGGGCGGGTGGCGAGCGGCGACGCCGTGCTCCTCGTCTCGCCGGAGAACCCGCGCAAGGCGGTCGTCAAGCGCGTCGTCGGGATGGAGGGCGACGCCGTCACGTTCCTCGTCGACCCCGGCAACAGCGACGCCTCCAAGACCGTCGTGGTACCAAAAGGCCATGTCTGGGTGCAGGGTGATAATATTTATGCTTCTAG AGATTCAAGACAGTTTGGACCTGTCCCTTATGGTCTAATTACAGGGAAGATCTTTTGTCGGGTTTGGCCACTGAAGGATTTTGGTCCGATAGATCCAATGTCAGCTGAGTAGGGGTAACTCAGCCTTA TTTTTCTTCTTCACTTATTTTCAGAATCCAGGCCTCTCGCTCTACCTTTATCTCTCCGAGCCGACCTTTTTTTACCCGTTTGCTCCAGAATTTATCGAAGACGGCATGCATATCTTGAGATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAACCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACA GTGTAACTTTGGTGTACGAAATTTTTAGAACATTATTGAGATAGACCAAAATTTGTAGAACGCTGTTGATTAATTAATCGAAGTCGCCATGTATCA GAGTTGTTATCGGACAGTGGTAAACGCTTACCGGTTTAATAAGTAGAAACAAAATTCTTGTTT] [-] EMBL CA305680 [ GCAGGGTGATAATATTTATGCTTCTAGAAGATTCAAGACAGTTTGGACCTGTCCCTTATGGTCTAATTACAGGGAAGATCTTTTGTCGGGTTTGGCCACTGAAGGATTTTGGTCCGATAGATCCAATGTCAGCTGAGTAGGGGTAACTCAGCCTTA TTTTTCTTCTTCACTTATTTTCAGAATCCAGGCCTCTCGCTCTACCTTTATCTCTCCGAGCCGACCTTTTTTTACCCGTTTGCTCCAGAATTTATCGAAGACGGCATGCATATCTTGAGATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAACCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACA GTG ] [-] EMBL CA305694 [ GGGTGATAATATTTATGCTTCTAG AGATTCAAGACAGTTTGGACCTGTCCCTTATGGTCTAATTACAGGGAAGATCTTTTGTCGGGTTTGGCCACTGAAGGATTTTGGTCCGATAGATCCAATGTCAGCTGAGTAGGGGTAACTCAGCCTTA TTTTTCTTCTTCACTTATTTTCAGAATCCAGGCCTCTCGCTCTACCTTTATCTCTCCGAGCCGACCTTTTTTTACCCGTTTGCTCCAGAATTTATCGAAGACGGCATGCATATCTTGAGATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAACCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACA ] [-] EMBL CA305665 [ GGTAACTCAGCCTTATTTTTTCTT NTCACTTATTTTCAGAATNCAGGCCTCTCGCTCTACCTTTATCTCTCCGAGCCGACCTTTTTTTACCCGTTTGCTCCAGAATTTATCGAAGACGGCATGCATATCTTGAGATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAACCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACA GT ] [-] EMBL CA305723 [ CTTCCCTTATTTTCAGAATCCAGGCCTCTCGCTCTACCTTTATCTNTCCGAGCCNNCCTTTTTTTNCCCGTTTGCTCCAGAATTTATCGAANNCGGCATGCATATCTTGANATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAACCGAGAGCATCAAAGTTTANANATCAG TTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACAGGTGTAACTT ] [+] EMBL BI796189 [ ATGCATATCTTGAGATTTTTATGATCAGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGC AAACCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTCAAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACA GTGTAACTTTGGTGTACGAAATTTTTAGAACATTATTGAGATAGACCAAAATTTGTAGAACGCTGTTGATTAATTAATCGAAGTCGCCATGTATCA GAGTTGTTATCGGACAaaa ] [+] EMBL CA764664 [ TTCTCAACCATGCTCTTGTATAAATTGAACA GTGTAACTTTGGTGTACGAAATTTTTAGAACATTATTGAGATAGACCAAAATTTGTAGAACGCTGTTGATTAATTAATCGAAGTCGCCATGTATCANGAGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||