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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10233#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2501 fasta sequence
[CTCCGGTCACTCCTCGCGCTCGAGGATCCCAGGTCGCCGACCGCCTCGGCGTCCTACCGGATCCTGGTCGCCGTCGTCGCCTGCCTCTTCGTCGCCGCTCTCGTCTCCGCTCCTTCCGTCTGGTCACGCATCAACGCGCCCTATCTGTGCCGCAAGGACGGGATTCGGCTCCACTGCCCCAGGGTGAACGAGCGGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGATTAAACCAGCAGCGAATAGCCGTACGGATGTTCTTTCCTCACATTATTAGCTTGCTGAAGCTGTGTTGTGTAATCAGTAGTTAACTGCGATACTCGATGTATTTGCAGATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCACATATGTGATGCCACTATAGAGGCATCTACTTCAAACCATGTAGGGGTTAGCATGTATTATAGGGTCAAAATTAGCTTATTTTACTATAGGATGCCAACAGTCTTATACAACCGAAAAGTGCAAGGGCAAAGGAAAATTGTATCACTAGGACAGGTACTGCTTATGGGCATTTTTTTCCTTATTTATTCTTCCTTTTTTCCCCTCTTGTCATGATGTTGAATGATTATAATATGTTTCTATTTTGGTCATCACTATCTGCTGTGTTTTCACCCATAGTTAGCAGTTACTATATGTGCTATATCTATAATTGATTAACACTGGAACATAGTCTTCCATGAATGTAACTTATTTTATTTTTGATGCTGATTATAACAGGCGAACTGTGAAAAATATTCCAAAGTATGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTAATGTCTTATCATCATGACTGCACCTCATCCATACATCTTGAGATTGGTTGTATAACTTTTTAGCGCTGTTACTGTCCTTGACATCAGAGTCTTTTGTTGTAAAGTGAATATTGCTCCCGGTTCCTCCCCTAAGTATATGCCTTACAATTTCGTTCACATCAATTGATGTGATTGAGTGTAACCTAAGCCTGCAATTTCAGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTA]
[+] EMBL AK072400 [CTCCGGTCACTCCTCGCGCTCGAGGATCCCAGGTCGCCGACCGCCTCGGCGTCCTACCGGATCCTGGTCGCCGTCGTCGCCTGCCTCTTCGTCGCCGCTCTCGTCTCCGCTCCTTCCGTCTGGTCACGCATCAACGCGCCCTATCTGTGCCGCAAGGACGGGATTCGGCTCCACTGCCCCAGGGTGAACGAGCGGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGATTAAACCAGCAGCGAATAGCCGTACGGATGTTCTTTCCTCACATTATTAGCTTGCTGAAGCTGTGTTGTGTAATCAGTAGTTAACTGCGATACTCGATGTATTTGCAGATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCACATATGTGATGCCACTATAGAGGCATCTACTTCAAACCATGTAGGGGTTAGCATGTATTATAGGGTCAAAATTAGCTTATTTTACTATAGGATGCCAACAGTCTTATACAACCGAAAAGTGCAAGGGCAAAGGAAAATTGTATCACTAGGACAGGTACTGCTTATGGGCATTTTTTTCCTTATTTATTCTTCCTTTTTTCCCCTCTTGTCATGATGTTGAATGATTATAATATGTTTCTATTTTGGTCATCACTATCTGCTGTGTTTTCACCCATAGTTAGCAGTTACTATATGTGCTATATCTATAATTGATTAACACTGGAACATAGTCTTCCATGAATGTAACTTATTTTATTTTTGATGCTGATTATAACAGGCGAACTGTGAAAAATATTCCAAAGTATGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTAATGTCTTATCATCATGACTGCACCTCATCCATACATCTTGAGATTGGTTGTATAACTTTTTAGCGCTGTTACTGTCCTTGACATCAGAGTCTTTTGTTGTAAAGTGAATATTGCTCCCGGTTCCTCCCCTAAGTATATGCCTTACAATTTCGTTCACATCAATTGATGTGATTGAGTGTAACCTAAGCCTGCAATTTCAGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTA]
consensusID : consensus_10233#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1092 fasta sequence
[TGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTAAAATCCAACGACACAT]
[+] EMBL AK060934 [TGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGTTAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAACAAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGAGAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAATGATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTGGTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGGTATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTCTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTAAAATCCAACGACACAT]
consensusID : consensus_10233#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 640 fasta sequence
[ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA]
[-] EMBL CA762623 [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA]
[-] EMBL CA762624 [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA]
[-] EMBL CA762622 [ACGAGACAAGGGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGGTCAAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGTGGCAATTTCGCCAAGCTGATCATCGGTTTCCGCCGCTACATGGGTCGGCATCGGCTCAAGTCTATCAAGCCAGACAAGGGCCTCATGTCCAAGTTTTTCGGCGATCCCTACATGCCATGGGCAACTTTCGTGGAGGATGTGATGATCACTCACCAGACACGAACTGGCCTCCCTGAGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAGCTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTAAGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTATCTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA]
consensusID : consensus_10233#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 540 fasta sequence
[GGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGTTTAAACCAGCAGCGAATAGCCATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCAC]
[+] EMBL CF306194 [GGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCTGGGTATATTTTTATTCATGCCGAGGGTGGTTTAAACCAGCAGCGAATAGCCATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCAC]
consensusID : consensus_10233#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence
[GAGCNTGGGGAAATAGGTATTATTTTACNTGCAATGGGATATACAAAGGAAACTNAGATATATGTTNCATCGGGGTCAAGTTTATGGTGGAACGAATAGAATGGCTCCCGTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGACTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCTGGTTTCCTGAAATCGGACGTGTTCGTCATCACGTGGCAATT]
[+] EMBL D42421 [GAGCNTGGGGAAATAGGTATTATTTTACNTGCAATGGGATATACAAAGGAAACTNAGATATATGTTNCATCGGGGTCAAGTTTATGGTGGAACGAATAGAATGGCTCCCGTAAGGAATATGTTCCCCAATTTGGTTACAAAAGAAGACTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCCTTGCTGCATTGGACTTCTGGTTTCCTGAAATCGGACGTGTTCGTCATCACGTGGCAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTCCGGTCACTCCTCGCGCTCGAGGATCCCAGGTCGCCGACCGCCTCGGCGTCCTACCGG 60
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 ATCCTGGTCGCCGTCGTCGCCTGCCTCTTCGTCGCCGCTCTCGTCTCCGCTCCTTCCGTC 120
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TGGTCACGCATCAACGCGCCCTATCTGTGCCGCAAGGACGGGATTCGGCTCCACTGCCCC 180
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 AGGGTGAACGAGCGGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTGGAAG 240
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAACCTCT 300
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GGGTATATTTTTATTCATGCCGAGGGTGGATTAAACCAGCAGCGAATAGCCGTACGGATG 360
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TTCTTTCCTCACATTATTAGCTTGCTGAAGCTGTGTTGTGTAATCAGTAGTTAACTGCGA 420
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TACTCGATGTATTTGCAGATATGTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACA 480
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTTATTTTACCTGTGCTGAAGCAGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGAT 540
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 ATCTTTGATGTAGATTATTTCATAAATTACTTGAAGGATGATGTACGCATTGTTCGAGAT 600
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 ATTCCTGAATGGTTCACAGAAAAAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCC 660
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TTTTCACTTATTCCTTCTATCTTTTCTTTTATCAATCAATAAGATTGATGTGTGCACACA 720
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTCCTAGAACATATGAATTCTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGC 780
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GGTTTGTAGTTGTCTTTCATTCACACATTGCATTGTCCACATATGTGATGCCACTATAGA 840
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GGCATCTACTTCAAACCATGTAGGGGTTAGCATGTATTATAGGGTCAAAATTAGCTTATT 900
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TTACTATAGGATGCCAACAGTCTTATACAACCGAAAAGTGCAAGGGCAAAGGAAAATTGT 960
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 ATCACTAGGACAGGTACTGCTTATGGGCATTTTTTTCCTTATTTATTCTTCCTTTTTTCC 1020
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CCTCTTGTCATGATGTTGAATGATTATAATATGTTTCTATTTTGGTCATCACTATCTGCT 1080
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GTGTTTTCACCCATAGTTAGCAGTTACTATATGTGCTATATCTATAATTGATTAACACTG 1140
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GAACATAGTCTTCCATGAATGTAACTTATTTTATTTTTGATGCTGATTATAACAGGCGAA 1200
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTGTGAAAAATATTCCAAAGTATGCATCGGCGCAGTTCTACATTGACAATGTACTTCCGA 1260
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GGATCAAAGATAAAAAGATAATGTCTATCAAGCCATTTGTTGATAGGCTGGGGTAATGTC 1320
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ------------------------------------------------------------
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TTATCATCATGACTGCACCTCATCCATACATCTTGAGATTGGTTGTATAACTTTTTAGCG 1380
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ---------------------------------------------TGCATCGGCGCAGTT 15
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTGTTACTGTCCTTGACATCAGAGTCTTTTGTTGTAAAGTGAATATTGCTCCCGGTTCCT 1440
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 CTACATTGACAATGTACTTCCGAGGATCAAAGATAAAAAGATAATGTCTATCAAGCCATT 75
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CCCCTAAGTATATGCCTTACAATTTCGTTCACATCAATTGATGTGATTGAGTGTAACCTA 1500
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 TGTTGATAGGCTGGGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGT 135
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 AGCCTGCAATTTCAGGTATGATAATGTTCCAATGGAGATTAACCGGCTCAGATGCAGAGT 1560
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 TAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAAC 195
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 TAATTACCATGCCTTGAAGTTTTTACCTGAAATCGAAGAAATGGCTGAGAAGCTAGCAAC 1620
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 AAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGA 255
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 AAGGATGAGGAACCGAACGGGCAATGTAAATCCATACATGGCTCTTCATCTTAGGTTTGA 1680
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 GAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAAT 315
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GAAAGGAATGGTGGGTCTTTCATTTTGCGATTTTGCGGGAACTAGAGAGGAGAAAGCAAT 1740
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 GATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTG 375
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 GATGGCTGATTATAGACAGAAACAATGGCCAAGACGCTTCAAGAATGGATCTCACCTTTG 1800
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 GTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGG 435
consensus_10233#2 ------------------------------------------------------------
consensus_10233#4 -------------------------------------------GAGCNTGGGGAAATAGG 17
consensus_10233#0 GTCATTAGCACTGGAGAAAAGAAAAGAAGGTCGCTGCCCTCTTGAGCCTGGGGAAATAGG 1860
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 TATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGG-TC 494
consensus_10233#2 ----ACGAGACAAG-GGGGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGG-TC 54
consensus_10233#4 TATTATTTTACNTGCAATGGGATATACAAAGGAAACTNAGATATATGTTNCATCGGGGTC 77
consensus_10233#0 TATTATTTTACGTGCAATGGGATATACAAAGGAAACTCAGATATATGTTGCATCCGG-TC 1919
consensus_10233#3 -----------------GGGAATCTCTCTGGGAGAATCCGCATGCTGCAGCGGCATCTTG 43
** ** * *** * * * ** * * *
consensus_10233#1 AAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTA 554
consensus_10233#2 AAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTA 114
consensus_10233#4 AAGTTTATGGTGGAACGAATAGAATGGCTCCCGTAAGGAATATGTTCCCCAATTTGGTTA 137
consensus_10233#0 AAGTTTATGGTGGAAGCAATAGAATGGCTCCGCTAAGGAATATGTTCCCCAATTTGGTTA 1979
consensus_10233#3 GAAGCCCTGCGCCGAGCGCCGTAGTGATGAGATCTCAGATCTTGTACCAGAGAATGAAAC 103
* ** * * ** ** *** ** * **
consensus_10233#1 CAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 614
consensus_10233#2 CAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 174
consensus_10233#4 CAAAAGAAGAC--TGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 195
consensus_10233#0 CAAAAGAAGATCTTGCAAGCAAAGAGGAGATAGAACACTTCAAGAAGCATGTGACCAGCC 2039
consensus_10233#3 CTCTGGGTATATTTTTATTCATGCCGAGGGTGGTTTAAACCA-GCAGCGAATAGCCATAT 162
* * * * ** * * * * * ** * *** * ***
consensus_10233#1 TTGCTGC-ATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGT 673
consensus_10233#2 TTGCTGC-ATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGT 233
consensus_10233#4 TTGCTGC-ATTGGACTTC-TGGTTT-CCTGAAATCGGACGTGTTCGTCATCAC-----GT 247
consensus_10233#0 TTGCTGC-ATTGGACTTCCTGGTTTGCCTGAAATCGGACGTGTTCGTCATGACCCACGGT 2098
consensus_10233#3 GTAATGCTGTTGCAATTGCTAAGATAATGAATGCCACACTTATTTTACCTGTGCTGAAGC 222
* *** *** * ** * * * * ** * ** * * *
consensus_10233#1 GGCAATTTCGCCAAGCTGATCAT-CGGTTTCCGCCGCTA-CATGGGTCGGCATCGGCTCA 731
consensus_10233#2 GGCAATTTCGCCAAGCTGATCAT-CGGTTTCCGCCGCTA-CATGGGTCGGCATCGGCTCA 291
consensus_10233#4 GGCAATT----------------------------------------------------- 254
consensus_10233#0 GGCAATTTCGCCAAGCTGATCAT-CGGTTTCCGCCGCTA-CATGGGTCGGCATCGGCTCA 2156
consensus_10233#3 AGGATCAAATCTGGAAAGATCAAACGAAATTTGAAGATATCTTTGATGTAGATTATTTCA 282
* *
consensus_10233#1 AGTCTATCAAGCCAGACAAGGGCCTCAT-GTCCAAGTTCTTCGGCGATCCCT-ACATGCC 789
consensus_10233#2 AGTCTATCAAGCCAGACAAGGGCCTCAT-GTCCAAGTTTTTCGGCGATCCCT-ACATGCC 349
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 AGTCTATCAAGCCAGACAAGGGCCTCAT-GTCCAAGTTCTTCGGCGATCCCT-ACATGCC 2214
consensus_10233#3 TAAATTACTTGAAGGATGATGTACGCATTGTTCGAGATATTCCTGAATGGTTCACAGAAA 342
consensus_10233#1 ATGGGCAACTTTCGTGGAGGATGTGATGA-TCACTCACCAGACACGAACTGGCCTCCCTG 848
consensus_10233#2 ATGGGCAACTTTCGTGGAGGATGTGATGA-TCACTCACCAGACACGAACTGGCCTCCCTG 408
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 ATGGGCAACTTTCGTGGAGGATGTGATGA-TCACTCACCAGACACGAACTGGCCTCCCTG 2273
consensus_10233#3 AAGATGAACTTTTCACCAGTATAAAGTTAGTTGCTTCCTTTTCACTTATTCCTTCTATCT 402
consensus_10233#1 AGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAG 908
consensus_10233#2 AGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAG 468
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 AGTCCACATTCCCACACTACGACCTCTGGGAAAACCCCCTTACGCCTTGCATGTGTAGAG 2333
consensus_10233#3 TTTCTTTTATCAATCAATAAGATTGATGTGTGCACACACTCCTAGAACATATGAATT--- 459
consensus_10233#1 CTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTA 968
consensus_10233#2 CTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTA 528
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTTAAACTATAGACAGATATTGATTGTGCGTAGATATTCTTTGTTCATATACTGATTGTA 2393
consensus_10233#3 CTGGAGACAAGCAAACAAGGTGATTGCCGCTGCTTGTTTGCGGTT--TGTAGTTGTCTTT 517
consensus_10233#1 AGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTAT 1028
consensus_10233#2 AGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTAT 588
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 AGTTTATATAGTTCTTTGTATCACATCCATTTTTCATTTTACCTGTTTTCTTAATTGTAT 2453
consensus_10233#3 CATTCACACATTGCATTGT-CCAC------------------------------------ 540
consensus_10233#1 CTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTAAAATCCAACGAC 1088
consensus_10233#2 CTTCCACCCTACAATGCACCAACTATTTTTACTCATTTTTCAAAAAAAAAAA-------- 640
consensus_10233#4 ------------------------------------------------------------
consensus_10233#0 CTTCTACCCTACAATGCACCAACTGTTTTTACTCATTTTTCATTCTTA------------ 2501
consensus_10233#3 ------------------------------------------------------------
consensus_10233#1 ACAT 1092
consensus_10233#2 ----
consensus_10233#4 ----
consensus_10233#0 ----
consensus_10233#3 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||