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Oryza sativa
cluster # 10258 cluster # 10258       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10258#0 length = 2062 sequences # 6  
consensus_10258#1 length = 691 sequences # 1  

consensusID : consensus_10258#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2062
fasta sequence
                              [TGGACTGAAGGAGTAGAAAGTCTTCAAACGTCCCAACTAAATTATAGCAGCCAAGAGCGAATCGCCTCTGGCCTCTGCTACTTTTTCATCCCCCGCACGGAAGGATATCTCAATTGTGAATCGTATCGCATGGTGTCCGGGGAAAAGGAGAAGTGGAAGAGAAGCCAGAAGGGAGACGACGAGAGATTTGTCCGGGCGGCAAGCCAAGGCGGCCGTTCTTTCCGTCGTGAACGCTTCGT-----GCAAAACATCCATCTGATTTATCTTGCGAATTGGATTGCTTAACCTAATCTGGGAATTCAAGTCAGTACGTACGATATGCCGGCACCATCGGCATCCATCCATCT-GGGAGTTCCAACTCCGTACATAACATCTCATGGATCCAAAATTGCTCGCCTACACATGTATGACT-GGATTGTGCTGATTCTTCTAGTCGTAGTAGATGGAATAC-TGAACATAATAGAACCATTCCATCGATTTGTTGGATCGGATATGATGACAGACCTCAGATACCCCA-TGAAAGACAACACAGTCCCATTTTGGGCGGTCCCGATAATTGGTATCATT-GGACCAATGATTATCATCACTGGAATATACTTCAAGAAGAGGAATGTGTATGATTTCCATCATGCCATACTAGGTCTCCTATTTTCAGTTCTTATCACGGCGGTAATAACTGATGCCATTAAAGATGGGGTTGGTCGACCGCGTCCAGATTTCTTTTGGCGCTGTTTTCCTGACGGAGTACCTGCTTATGATAATTTCACTACAGGAGTGCTTT-GTCATGGTAAGGCGAGCGTTATCAAAGAAGGTCACAAGAGTTTTCCGAGTGGCCATACTTCTTGGTCTTTTGCTGGCCTTGGTTTCCTGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTTGACAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTCTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTGCCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACGAGATAAAAACCTGCTACTGTTGTAGCAGACATACCTGACGTACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTTCAACAT-GATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTATCCGGAAGTATGCCTGACAGTAGATGGTCACATTGTCGCTTGGCTTATCATACAGAATAGGGTTTGGACCTCTGGCCGGCTTGTGACCAGGGGGTTGGAAAAATAATGGCAGGTGCCCTCTCTGCATATAAGAGAAGATGATACGGCTTTGCACCTCGTCGCCGAGTGCAGGTATACGAGAAGGATTTGAAACCTCGTTGCGACATGGGTAGGGTTTCACCAGCTAGAACTCCGACGCTGGGGGTGGTGCAACCGGTCAAAGATTGGTGGAAAATACTGGCCTCTGTGTCTGGCGTCCCTAAGAAGGGACTCTGCACCCTGATTCTACTCATCGTATGGGAAGTTTGGAAGGTGCGAAATAGGAGGATATTTGATTATAAGGAAGCCACAACCTCGTATCTCCTTTCAAAGATAAAAGAAGAGGCTGGCATGTGGGCCTTGGCAGGCGCCAAGTGTCTTGGAGAGATCATCCCGCAGTTTGTATAGTGTACAGCTTTCCTTATTTTTTGCTTTTTCTTTACCCTTAGGGGTTGTATTTTTTTTCTTGCTATATTCAATGAATAAGCACATTCTTGTGCT]

[+] EMBL CF315811             [TGGACTGAAGGAGTAGAAAGTCTTCAAACGTCCCAACTAAATTATAGCAGCCAAGAGCGAATCGCCTCTGGCCTCTGCTACTTTTTCATCCCCCGCACGGAAGGATATCTCAATTGTGAATCGTATCGCATGGTGTCCGGGGAAAAGGAGAAGTGGAAGAGAAGCCAGAAGGGAGACGACGAGAGATTTGTCCGGGCGGCAAGCCAAGGCGGCCGTTCTTTCCGTCGTGAACGCTTCGTGTAAGGCAAAACATCCATCTGATTTATCTTGCGAATTGGATTGCTTAACCTAATCTGGGAATTCAAGTCAGTACGTACGATATGCCGGCACCATCGGCATCCATCCATCTGGGGAGTTCCAACTCCGTACATAACATCTCATGGATCCAAAATTGCTCGCCTACACATGTATGACT GGATTGTGCTGATTCTTCTAGTCGTAGTAGATGGAATAC TGAACATAATAGAACCATTCCATCGATTTGTTGGATCGGATATGATGACAGACCTCAGATACCCCA TGAAAGACAACACAGTCCCATTTTGGGCGGTCCCGATAATTGGTATCATT GGACCAATGATTATCATCACTGGAATATACTTCAAGAAGAGGAATGTGTATGATTTCCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK101201             [                       TCAAACGTCCCAACTAAGTTATAGCAGCCAAGAGCGAATCGCCTCTGGCCTCTGCTACTTTTTCATCCCCCGCACGGAAGGATATCTCAATTGTGAATCGTATCGCATGGTGTCCGGGGAAAAGGAGAAGTGGAAGGGAAGCCAGAAGGGAGACGACGAGAGATTTGTCCGGGCGGCAAGCCAAGGCGGCCGTTCTTTCCGTCGTGAACGCTTCGT     GCAAAACATCCATCTGATTTATCTTGCGAATTGGATTGCTTAACCTAATCTGGGAATTCAAGTCAGTACGTACGATATGCCGGCACCATCGGCATCCATCCATCT GGGAGTTCCAACTCCGTACATAACATCTCATGGATCCAAAATTGCTCGCCTACACATGTATGACT GGATTGTGCTGATTCTTCTAGTCGTAGTAGATGGAATAC TGAACATAATAGAACCATTCCATCGATTTGTTGGATCGGATATGATGACAGACCTCAGATACCCCA TGAAAGACAACACAGTCCCATTTTGGGCGGTCCCGATAATTGGTATCATT GGACCAATGATTATCATCACTGGAATATACTTCAAGAAGAGGAATGTGTATGATTTCCATCATGCCATACTAGGTCTCCTATTTTCAGTTCTTATCACGGCGGTAATAACTGATGCCATTAAAGATGGGGTTGGTCGACCGCGTCCAGATTTCTTTTGGCGCTGTTTTCCTGACGGAGTACCTGCTTATGATAATTTCACTACAGGAGTGCTTT GTCATGGTAAGGCGAGCGTTATCAAAGAAGGTCACAAGAGTTTTCCGAGTGGCCATACTTCTTGGTCTTTTGCTGGCCTTGGTTTCCTGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTTGACAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTCTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTGCCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACGAGATAAAAACCTGCTACTGTTGTAGCAGACATACCTGACGTACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTTCAACAT GATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTATCCGGAAGTATGCCTGACAGTAGATGGTCACATTGTCGCTTGGCTTATCATACAGAATAGGGTTTGGACCTCTGGCCGGCTTGTGACCAGGGGGTTGGAAAAATAATGGCAGGTGCCCTCTCTGCATATAAGAGAAGATGATACGGCTTTGCACCTCGTCGCCGAGTGCAGGTATACGAGAAGGATTTGAAACCTCGTTGCGACATGGGTAGGGTTTCACCAGCTAGAACTCCGACGCTGGGGGTGGTGCAACCGGTCAAAGATTGGTGGAAAATACTGGCCTCTGTGTCTGGCGTCCCTAAGAAGGGACTCTGCACCCTGATTCTACTCATCGTATGGGAAGTTTGGAAGGTGCGAAATAGGAGGATATTTGATTATAAGGAAGCCACAACCTCGTATCTCCTTTCAAAGATAAAAGAAGAGGCTGGCATGTGGGCCTTGGCAGGCGCCAAGTGTCTTGGAGAGATCATCCCGCAGTTTGTATAGTGTACAGCTTTCCTTATTTTTTGCTTTTTCTTTACCCTTAGGGGTTGTATTTTTTTTCTTGCTATATTCAATGAATAAGCACATTCTTGTGCT]
[+] EMBL C26512               [                                                                                                                                                 AGGAGAAGTGGAAGAGAAGCCAGAAGGGAGACGACGAGAGATTTGTCCGGGCGGCAA CANAGGCGNCCGTTCTTTCCGTCGTGAACGCTTCGTGTAAGGCAAAACATCCATCTGATTTATCTTGCGAATTGGATTGCTTAACCTAATCTGGGAATTCAAGTCAGTACGTACGATATGCCGGCACCATCGGCATCCATCCATCT GGGAGTTCCAACTCCGTACATAACATCTCATGGATCCAAAATTGCTCGCCTACACATGTATGACTGGGATTGTGCTGATTCTTCTAGTCGTAGTAGATGGAATACTTGAACATAATAGAACCATTCCATCGATTTGTTGGATCGGATATGATGACAGACCTCAGATACCCCATTGAAAGACAACACAGTCCCATTTTGGGCGGTCCCGATAATTGGNATCATTNGGACCAATGATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA765107             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAATTT ACTACAGGAGTGCTTT GTCATGGTAAGGCGAGCGTTATCAAAGGAGGTCACAAGAGTTTTCCGAGTGGCCATACTTCTTGGTCTTTTGCTGGCCTTGGTTTCCTGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTTGACAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTCTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAGTTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTACCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACAAGATAAAAACCTGCTACTGTTGTAGTAGACATACCTGACGCACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTCACTTGTACATTTCAACATGGATGATGGTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATACACCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU077931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTGCTTTGGTCATGGTAAGGCGAGCGTTATCAAAGAAGNTCACAAGAGTTTTCCGAGTGNCCATACTTCTTGGTCTTTTGCTGGCCTTGGTTTCCTGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTTGACAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTCTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTGCCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACGAGATAAAAACCTGCTACTGTTGTAGCAGACATACCTGACGTACTTTTTGATAGACTGAGAATTATACGGAGA CTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTTCAACAT GATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAAaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF315812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTGCCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACGAGATAAAAACCTGCTACTGTTGTAGCAGACATACCTGACGTACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTTCAACAT GATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTAaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_10258#0 TGGACTGAAGGAGTAGAAAGTCTTCAAACGTCCCAACTAAATTATAGCAGCCAAGAGCGA ATCGCCTCTGGCCTCTGCTACTTTTTCATCCCCCGCACGGAAGGATATCTCAATTGTGAA TCGTATCGCATGGTGTCCGGGGAAAAGGAGAAGTGGAAGAGAAGCCAGAAGGGAGACGAC GAGAGATTTGTCCGGGCGGCAAGCCAAGGCGGCCGTTCTTTCCGTCGTGAACGCTTCGTG CAAAACATCCATCTGATTTATCTTGCGAATTGGATTGCTTAACCTAATCTGGGAATTCAA GTCAGTACGTACGATATGCCGGCACCATCGGCATCCATCCATCTGGGAGTTCCAACTCCG TACATAACATCTCATGGATCCAAAATTGCTCGCCTACACATGTATGACTGGATTGTGCTG ATTCTTCTAGTCGTAGTAGATGGAATACTGAACATAATAGAACCATTCCATCGATTTGTT GGATCGGATATGATGACAGACCTCAGATACCCCATGAAAGACAACACAGTCCCATTTTGG GCGGTCCCGATAATTGGTATCATTGGACCAATGATTATCATCACTGGAATATACTTCAAG AAGAGGAATGTGTATGATTTCCATCATGCCATACTAGGTCTCCTATTTTCAGTTCTTATC ACGGCGGTAATAACTGATGCCATTAAAGATGGGGTTGGTCGACCGCGTCCAGATTTCTTT TGGCGCTGTTTTCCTGACGGAGTACCTGCTTATGATAATTTCACTACAGGAGTGCTTTGT CATGGTAAGGCGAGCGTTATCAAAGAAGGTCACAAGAGTTTTCCGAGTGGCCATACTTCT TGGTCTTTTGCTGGCCTTGGTTTCCTGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTT GACAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTCTGCTCCTTGCAGCC TTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGT GGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCT GATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTG GAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTGCCGAACGGGTCCTTT AGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATG GAAGCTGGTCGTAGATATCAATAACGAGATAAAAACCTGCTACTGTTGTAGCAGACATAC CTGACGTACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTAC ATATACCGTGTAGAATTGTTACTTGTACATTTCAACATGATGATGTTAGCTATTTCTCAT GTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTATCCGGAAGTATGCCTGA CAGTAGATGGTCACATTGTCGCTTGGCTTATCATACAGAATAGGGTTTGGACCTCTGGCC GGCTTGTGACCAGGGGGTTGGAAAAATAATGGCAGGTGCCCTCTCTGCATATAAGAGAAG ATGATACGGCTTTGCACCTCGTCGCCGAGTGCAGGTATACGAGAAGGATTTGAAACCTCG TTGCGACATGGGTAGGGTTTCACCAGCTAGAACTCCGACGCTGGGGGTGGTGCAACCGGT CAAAGATTGGTGGAAAATACTGGCCTCTGTGTCTGGCGTCCCTAAGAAGGGACTCTGCAC CCTGATTCTACTCATCGTATGGGAAGTTTGGAAGGTGCGAAATAGGAGGATATTTGATTA TAAGGAAGCCACAACCTCGTATCTCCTTTCAAAGATAAAAGAAGAGGCTGGCATGTGGGC CTTGGCAGGCGCCAAGTGTCTTGGAGAGATCATCCCGCAGTTTGTATAGTGTACAGCTTT CCTTATTTTTTGCTTTTTCTTTACCCTTAGGGGTTGTATTTTTTTTCTTGCTATATTCAA TGAATAAGCACATTCTTGTGCT



consensusID : consensus_10258#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [ACAAGAGTTTTCCGAGTGGCCATACTTCTTGGTCTTTNGCTGGCCTGGGTTCCCGGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTGCCAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTNTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTTTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTACCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACAAGATAAAATCCTGCTACTGTTGTAGTAGACATACCTGACGCACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTTCAACATGATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763030             [ACAAGAGTTTTCCGAGTGGCCATACTTCTTGGTCTTTNGCTGGCCTGGGTTCCCGGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTGCCAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTNTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTTTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTACCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACAAGATAAAATCCTGCTACTGTTGTAGTAGACATACCTGACGCACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTTCAACATGATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTAAAAAAAAAAAAAAAAAAAAA]


>consensus_10258#1 ACAAGAGTTTTCCGAGTGGCCATACTTCTTGGTCTTTNGCTGGCCTGGGTTCCCGGTCAT GGTATCTGGCTGGTAAAATAAAAGTTTTGCCAGAAGAGGCCATGTTGCAAAACTCTGCAT TATTATTCTCCCTNTGCTCCTTGCAGCCTTGGTTGCTGTTTCTCGGGTAGATGACTATTG GCATCATTGGCAAGATGTGTTCACCGGTGGAATTTTGGGGTTGGTGGTTTCTTCATTTTG CTACCTCCAATTTTTTCCAATGCCATCTGATGAAAACGGATTATGGCCTCACGCATACGC CCGGCACATTTTCAACCCTGATCAGCTGGAGAACAACGCGCAACCCACGTCCGTGGATCG CCCTAACTCTCTACCGAACGGGTCCTTTAGAAGCCCTAATGGATTGGAAATGGGAAACAC GGGCCAAGGCCAAGCATTAGATTTCATGGAAGCTGGTCGTAGATATCAATAACAAGATAA AATCCTGCTACTGTTGTAGTAGACATACCTGACGCACTTTTTGATAGACTGAGAATTATA CGGAGACCTTTCAGGTTCACTTTGGTACATATACCGTGTAGAATTGTTACTTGTACATTT CAACATGATGATGTTAGCTATTTCTCATGTAAATCTATACCAGATTAAAATAATGCACCT ACATTTGGGTAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10258#0      TGGACTGAAGGAGTAGAAAGTCTTCAAACGTCCCAACTAAATTATAGCAGCCAAGAGCGA 60
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      ATCGCCTCTGGCCTCTGCTACTTTTTCATCCCCCGCACGGAAGGATATCTCAATTGTGAA 120
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      TCGTATCGCATGGTGTCCGGGGAAAAGGAGAAGTGGAAGAGAAGCCAGAAGGGAGACGAC 180
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      GAGAGATTTGTCCGGGCGGCAAGCCAAGGCGGCCGTTCTTTCCGTCGTGAACGCTTCGTG 240
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      CAAAACATCCATCTGATTTATCTTGCGAATTGGATTGCTTAACCTAATCTGGGAATTCAA 300
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      GTCAGTACGTACGATATGCCGGCACCATCGGCATCCATCCATCTGGGAGTTCCAACTCCG 360
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      TACATAACATCTCATGGATCCAAAATTGCTCGCCTACACATGTATGACTGGATTGTGCTG 420
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      ATTCTTCTAGTCGTAGTAGATGGAATACTGAACATAATAGAACCATTCCATCGATTTGTT 480
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      GGATCGGATATGATGACAGACCTCAGATACCCCATGAAAGACAACACAGTCCCATTTTGG 540
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      GCGGTCCCGATAATTGGTATCATTGGACCAATGATTATCATCACTGGAATATACTTCAAG 600
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      AAGAGGAATGTGTATGATTTCCATCATGCCATACTAGGTCTCCTATTTTCAGTTCTTATC 660
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      ACGGCGGTAATAACTGATGCCATTAAAGATGGGGTTGGTCGACCGCGTCCAGATTTCTTT 720
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      TGGCGCTGTTTTCCTGACGGAGTACCTGCTTATGATAATTTCACTACAGGAGTGCTTTGT 780
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      CATGGTAAGGCGAGCGTTATCAAAGAAGGTCACAAGAGTTTTCCGAGTGGCCATACTTCT 840
consensus_10258#1      -------------------------------ACAAGAGTTTTCCGAGTGGCCATACTTCT 29
                                                      *****************************

consensus_10258#0      TGGTCTTTTGCTGGCCTTGGTTTCCTGTCATGGTATCTGGCTGGTAAAATAAAAGTTTTT 900
consensus_10258#1      TGGTCTTTNGCTGGCCTGGGTTCCCGGTCATGGTATCTGGCTGGTAAAATAAAAGTTTT- 88
                       ******** ******** **** ** ********************************* 

consensus_10258#0      GACAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTCTGCTCCTTGCAGCC 960
consensus_10258#1      GCCAGAAGAGGCCATGTTGCAAAACTCTGCATTATTATTCTCCCTNTGCTCCTTGCAGCC 148
                       * ******************************************* **************

consensus_10258#0      TTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGT 1020
consensus_10258#1      TTGGTTGCTGTTTCTCGGGTAGATGACTATTGGCATCATTGGCAAGATGTGTTCACCGGT 208
                       ************************************************************

consensus_10258#0      GGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCT 1080
consensus_10258#1      GGAATTTTGGGGTTGGTGGTTTCTTCATTTTGCTACCTCCAATTTTTTCCAATGCCATCT 268
                       ************************************************************

consensus_10258#0      GATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTCTCAACCCTGATCAGCTG 1140
consensus_10258#1      GATGAAAACGGATTATGGCCTCACGCATACGCCCGGCACATTTTCAACCCTGATCAGCTG 328
                       ****************************************** *****************

consensus_10258#0      GAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTGCCGAACGGGTCCTTT 1200
consensus_10258#1      GAGAACAACGCGCAACCCACGTCCGTGGATCGCCCTAACTCTCTACCGAACGGGTCCTTT 388
                       ******************************************** ***************

consensus_10258#0      AGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATG 1260
consensus_10258#1      AGAAGCCCTAATGGATTGGAAATGGGAAACACGGGCCAAGGCCAAGCATTAGATTTCATG 448
                       ************************************************************

consensus_10258#0      GAAGCTGGTCGTAGATATCAATAACGAGATAAAAACCTGCTACTGTTGTAGCAGACATAC 1320
consensus_10258#1      GAAGCTGGTCGTAGATATCAATAACAAGATAAAATCCTGCTACTGTTGTAGTAGACATAC 508
                       ************************* ******** **************** ********

consensus_10258#0      CTGACGTACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTAC 1380
consensus_10258#1      CTGACGCACTTTTTGATAGACTGAGAATTATACGGAGACCTTTCAGGTTCACTTTGGTAC 568
                       ****** *****************************************************

consensus_10258#0      ATATACCGTGTAGAATTGTTACTTGTACATTTCAACATGATGATGTTAGCTATTTCTCAT 1440
consensus_10258#1      ATATACCGTGTAGAATTGTTACTTGTACATTTCAACATGATGATGTTAGCTATTTCTCAT 628
                       ************************************************************

consensus_10258#0      GTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTATCCGGAAGTATGCCTGA 1500
consensus_10258#1      GTAAATCTATACCAGATTAAAATAATGCACCTACATTTGGGTAAAAAAAAAAAAAAAAAA 688
                       *******************************************     **  *      *

consensus_10258#0      CAGTAGATGGTCACATTGTCGCTTGGCTTATCATACAGAATAGGGTTTGGACCTCTGGCC 1560
consensus_10258#1      AAA--------------------------------------------------------- 691
                        *                                                          

consensus_10258#0      GGCTTGTGACCAGGGGGTTGGAAAAATAATGGCAGGTGCCCTCTCTGCATATAAGAGAAG 1620
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      ATGATACGGCTTTGCACCTCGTCGCCGAGTGCAGGTATACGAGAAGGATTTGAAACCTCG 1680
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      TTGCGACATGGGTAGGGTTTCACCAGCTAGAACTCCGACGCTGGGGGTGGTGCAACCGGT 1740
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      CAAAGATTGGTGGAAAATACTGGCCTCTGTGTCTGGCGTCCCTAAGAAGGGACTCTGCAC 1800
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      CCTGATTCTACTCATCGTATGGGAAGTTTGGAAGGTGCGAAATAGGAGGATATTTGATTA 1860
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      TAAGGAAGCCACAACCTCGTATCTCCTTTCAAAGATAAAAGAAGAGGCTGGCATGTGGGC 1920
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      CTTGGCAGGCGCCAAGTGTCTTGGAGAGATCATCCCGCAGTTTGTATAGTGTACAGCTTT 1980
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      CCTTATTTTTTGCTTTTTCTTTACCCTTAGGGGTTGTATTTTTTTTCTTGCTATATTCAA 2040
consensus_10258#1      ------------------------------------------------------------
                                                                                   

consensus_10258#0      TGAATAAGCACATTCTTGTGCT 2062
consensus_10258#1      ----------------------
                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)