cluster # 10260

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Oryza sativa
cluster # 10260 cluster # 10260 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10260#0 length = 3286 sequences # 6

consensus_10260#1 length = 141 sequences # 1

consensusID : consensus_10260#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3286
fasta sequence

                              [TATTTGGATGAGCGAATCTGGTTACCTTCATCTCTTCTGAAGGCATTTGCTTCTATTAAGCAAGTTATCTTCTCATCTATGGAGAAGAATAATGTGCCTCACACATTTTGGTCTTCCTATCTCCCATCTTTGATACAACAGAAAGGTATTGCAAAAAGAATTGCATCAATCTTGTCAGGCTATGGTCTAATAGCTTATCAACTAGGAAACCATGATTCTGTGTTAAATCACAATGAACAGCACGAGAAGTTTGATGCCCACAGATTGAATTCCACCGGTTCTCACCCAAAAGGAGGTTTAGCACATAAATTATCAGGATTTAGAGCTTTAGCTGCTGGAGCGCCCAGATCAGGCCAACAACATCTGATCCGTTGCCTTCTTCATGGTTTTGTGGGTCATACTGTAATACACAAGCTTGATCTTGCAACTATGGCACAGGAGGGAAACGGTGATATTCTTAGTGGACTCACACAAATTCTTCTAAAATGCCTTAATCTTGGAAGATGTATAATCTATATGCCTAGAATTGATTTGTGGGCCATCGACAAGTTCCATGAACAAGAAGCAGAAGATCATGTGCTCAATGTGGGAACAAGCAAGTTAGGGTCCACAGCAACAAAAAATATTAAAAAATGTTCTGAAGTATGGAATTCGTTGGTTGATCAGATGGGTTCATTGTTAGCTTCTGTATCCATCAGTGTTCTGTCCACCAGTGAACTGAAGTTTCAAGATCTCCCTAGTGGAGTAAGACATTTCTTCAGCACACATGTTGTAGATCAATGTCTTGCTTCTTCAGAACACACAATACCAAGGTTCTCTGTGAAATG-TGACAGCTACTTTACCTGGGATGAGGTTATTGACGCATGCTGTTTGCGGATATCACATGATTTAGTTCAGCAGCATGTTCAACTTTTGCATGACAGGGCTCATAACAATCATGATGAACAGAAAGAGGTCTTTGTTCCTATGGAAATTAGTGCACCAGGTGAACATAGATCCAGTGGGAGTAAGGAAGCCAGCATGTTAACGAAGTATCCATTGAACATGGACAAGCATCCCTCATGTGGGGTTTCTTCAAGAGAGCATCCTACTCAGCTGGGCACATGTAGTGCTCAGCAAGAGCCACCAACATCTAATGTTGAAGATAAAGAGGACAATACTGAGAAAATTGATTTCAATGAGAAAGTCGCAACAAATCGTTCTAATAGAATTGTGAAGGACAGTGAATCACTAGCTATTATGGCCTTTGGAATTCAGATACTACAGCACCCGCAATTTTCTAAACTTTGTTGGGTTACATCGAAACTACGAGAGGGCCCCTGCACTGATATAAATGGACCATGGAAAGGCTGGCCATTTAATTCCTGTTTATTGCAAAGCACTACAGCTGATAAATCATTATCTGGAGGAAACAATGTTCTTAAGGGCAAAGAGAAGATTCCGTCTGTCAGAGGACTAGTTGCTGTTGGTCTATTAGCATATAGAGGTGCTTATGCATCTGTTTTGGAAATCTGTTCTGAGGTGAGAAAGGTCTTGGAACTGTTAGTTGGACAGGTCCGAACTAAAATTTTGGAAAAGAGAAGTCGATATCGGTACTTCCATATTCTGTCCCAAGTTGCTTATCTGGATGATATCATGAGCAGCTGGGCATACACCTTTCAAAGGTTACATAGTGAAAACAGGAGAGTAAAAACAAGTCCAAAGGTAACTGTTGGAAAGTCATCCACAAGAGAATGTCAAGGCGACAGCAACACTGCAGAAGCAAACATACTTGGTGCTCCTGCTGGCTGCTCTGAGGCCCAAGGCACTCCTGGCCAACATACAGATGACCTTGAAGTTATTCCTGCTCACTGCCCTAGTGAGATGCAAGAGAATTCAGTCCAACATGCTCCAGGCCATCTTGAAATCCATGGCATTGTCTGCGACCTTGACAATGATAATGTGACATCTATATCCAGCATAAATGCAGTGGAACCTGATCTTATCCATTCAGCTTCACTTGATGTGCACACAGATTCACTTACCCCAGCAGATGCAGTAATAAATGATGGGCAATCTTGT--GGGGTTGACAATGATGGGCAAATGTCCAGAGTAATCAAT-GGAGAAGAAAACCACATATCTAATATTGAAAGACCTGAAAGCCACACAGTATCTGTTGCGGATTTCAATGAGTTGCAAAGGAAAAATGCTGTTGCATCCTCAACTAGTACCGACAGTGCAGGAACATCCAGGAACATGGTGTCTTCTGAAGCTCGTGGAAGTGACAATGAGCGGAATACTGATTTCCCTGTGGATGATGTCAAATTAGGTCATTTGGTTAATCCTCAATCACAGGATACCATGAAAAGTCTCTCAGTTCTGAAACCTCCATGTCTCTACAAATGTTGCCCTGTGTGTTTCAATGCTGTTTATAAGATGGTTCATGATATTCTTTCAAATTCAGTAAGGCCTAGTCTGCATTGCTTAGCAGTCGATGATATGCATGACCTTTTGTCATCATGGTCAGTGAATCTTCTAGCAACAGTTAGAAAATGGTATACTTCTCAAGGTATTGTTGGCTCTGAAGAAAATTCTGGAGAAGGGCATTGTGTTTGTAGCAGTGATAATGGTTGTGTTCCAAGGGAGTGCACATGCCATTTGGAAAGCAACGAAGATGCTGGAACTATAAAGGATGAGAGCTATTATCTAAGTGGACAGCCATTAAGTTTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACACTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTCAATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCACAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTCTCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACACCTCCTCCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTCAGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAAAGAAACAATGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGATATTGGAATCTTTAAACTAGCTGATCCGTGATGCTTTCTCAAATCTCATTGTATTATGTATTATAGCTCAATTAAATCACTGAGTTGATCAGTTGAAACAAGAAAAA]

[+] EMBL CB628730             [TATTTGGATGAGCGAATCTGGTTACCTTCATCTCTTCTGAAGGCATTTGCTTCTATTAAGCAAGTTATCTTCTCATCTATGGAGAAGAATAATGTGCCTCACACATTTTGGTCTTCCTATCTCCCATCTTTGATACAACAGAAAGGTATTGCAAAAAGAATTGCATCAATCTTGTCAGGCTATGGTCTAATAGCTTATCAACTAGGAAACCATGATTCTGTGTTAAATCACAATGAACAGCACGAGAAGTTTGATGCCCACAGATTGAATTCCACCGGTTCTCACCCAAAAGGAGGTTTAGCACATAAATTATCAGGATTTAGAGCTTTAGCTGCTGGAGCGCCCAGATCAGGCCAACAACATCTGATCCGTTGCCTTCTTCATGGTTTTGTGGGTCATACTGTAATACACAAGCTTGATCTTGCAACTATGGCACAGGAGGGAAACGGTGATATTCTTAGTGGACTCACACAAATTCTTCTAAAATGCCTTAATCTTGGAAGATGTATAATCTATATGCCTAGAATTGATTTGTGGGCCATCGACAAGTTCCATGAACAAGAAGCAGAAGATCATGTGCTCAATGTGGGAACAAGCAAGTTAGGGTCCACAGCAACAAAAAATATTAAAAAATGTTCTGAAGTATGGAATTCGTTGGTTGATCAGATGGGTTCATTGTTAGCTTCTGTATCCATCAGTGTTCTGTCCACCAGTGAACTGAAGTTTCAAGATCTCCCTAGTGGAGTAAGACATTTCTTCAGCACACATGTTGTAGATCAATGTCTTGCTTCTTCAGAACACACAATACCAAGGTTCTCTGTGAAATG TGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK102266             [              AATCTGGTTACCTTCATCTCTTCTGAAGGCATTTGCTTCTATTAAGCAAGTTATCTTCTCATCTATGGAGAAGAATAATGTGCCTCACACATTTTGGTCTTCCTATCTCCCATCTTTGATACAACAGAAAGGTATTGCAAAAAGAATTGCATCAATCTTGTCAGGCTATGGTCTAATAGCTTATCAACTAGGAAACCATGATTCTGTGTTAAATCACAATGAACAGCACGAGAAGTTTGATGCCCACAGATTGAATTCCACCGGTTCTCACCCAAAAGGAGGTTTAGCACATAAATTATCAGGATTTAGAGCTTTAGCTGCTGGAGCGCCCAGATCAGGCCAACAACATCTGATCCGTTGCCTTCTTCATGGTTTTGTGGGTCATACTGTAATACACAAGCTTGATCTTGCAACTATGGCACAGGAGGGAAACGGTGATATTCTTAGTGGACTCACACAAATTCTTCTAAAATGCCTTAATCTTGGAAGATGTATAATCTATATGCCTAGAATTGATTTGTGGGCCATCGACAAGTTCCATGAACAAGAAGCAGAAGATCATGTGCTCAATGTGGGAACAAGCAAGTTAGGGTCCACAGCAACAAAAAATATTAAAAAATGTTCTGAAGTATGGAATTCGTTGGTTGATCAGATGGGTTCATTGTTAGCTTCTGTATCCATCAGTGTTCTGTCCACCAGTGAACTGAAGTTTCAAGATCTCCCTAGTGGAGTAAGACATTTCTTCAGCACACATGTTGTAGATCAATGTCTTGCTTCTTCAGAACACACAATACCAAGGTTCTCTGTG AATGTTGACAGCTACTTTACCTGGGATGAGGTTATTGACGCATGCTGTTTGCGGATATCACATGATTTAGTTCAGCAGCATGTTCAACTTTTGCATGACAGGGCTCATAACAATCATGATGAACAGAAAGAGGTCTTTGTTCCTATGGAAATTAGTGCACCAGGTGAACATAGATCCAGTGGGAGTAAGGAAGCCAGCATGTTAACGAAGTATCCATTGAACATGGACAAGCATCCCTCATGTGGGGTTTCTTCAAGAGAGCATCCTACTCAGCTGGGCACATGTAGTGCTCAGCAAGAGCCACCAACATCTAATGTTGAAGATAAAGAGGACAATACTGAGAAAATTGATTTCAATGAGAAAGTCGCAACAAATCGTTCTAATAGAATTGTGAAGGACAGTGAATCACTAGCTATTATGGCCTTTGGAATTCAGATACTACAGCACCCGCAATTTTCTAAACTTTGTTGGGTTACATCGAAACTACGAGAGGGCCCCTGCACTGATATAAATGGACCATGGAAAGGCTGGCCATTTAATTCCTGTTTATTGCAAAGCACTACAGCTGATAAATCATTATCTGGAGGAAACAATGTTCTTAAGGGCAAAGAGAAGATTCCGTCTGTCAGAGGACTAGTTGCTGTTGGTCTATTAGCATATAGAGGTGCTTATGCATCTGTTTTGGAAATCTGTTCTGAGGTGAGAAAGGTCTTGGAACTGTTAGTTGGACAGGTCCGAACTAAAATTTTGGAAAAGAGAAGTCGATATCGGTACTTCCATATTCTGTCCCAAGTTGCTTATCTGGATGATATCATGAGCAGCTGGGCATACACCTTTCAAAGGTTACATAGTGAAAACAGGAGAGTAAAAACAAGTCCAAAGGTAACTGTTGGAAAGTCATCCACAAGAGAATGTCAAGGCGACAGCAACACTGCAGAAGCAAACATACTTGGTGCTCCTGCTGGCTGCTCTGAGGCCCAAGGCACTCCTGGCCAACATACAGATGACCTTGAAGTTATTCCTGCTCACTGCCCTAGTGAGATGCAAGAGAATTCAGTCCAACATGCTCCAGGCCATCTTGAAATCCATGGCATTGTCTGCGACCTTGACAATGATAATGTGACATCTATATCCAGCATAAATGCAGTGGAACCTGATCTTATCCATTCAGCTTCACTTGATGTGCACACAGATTCACTTACCCCAGCAGATGCAGTAATAAATGATGGGCAATCTTGT  GGGGTTGACAATGATGGGCAAATGTCCAGAGTAATCAAT GGAGAAGAAAACCACATATCTAATATTGAAAGACCTGAAAGCCACACAGTATCTGTTGCGGATTTCAATGAGTTGCAAAGGAAAAATGCTGTTGCATCCTCAACTAGTACCGACAGTGCAGGAACATCCAGGAACATGGTGTCTTCTGAAGCTCGTGGAAGTGACAATGAGCGGAATACTGATTTCCCTGTGGATGATGTCAAATTAGGTCATTTGGTTAATCCTCAATCACAGGATACCATGAAAAGTCTCTCAGTTCTGAAACCTCCATGTCTCTACAAATGTTGCCCTGTGTGTTTCAATGCTGTTTATAAGATGGTTCATGATATTCTTTCAAATTCAGTAAGGCCTAGTCTGCATTGCTTAGCAGTCGATGATATGCATGACCTTTTGTCATCATGGTCAGTGAATCTTCTAGCAACAGTTAGAAAATGGTATACTTCTCAAGGTATTGTTGGCTCTGAAGAAAATTCTGGAGAAGGGCATTGTGTTTGTAGCAGTGATAATGGTTG GTTCCAAGGGAGTGCACATGCCATTTGGAAAGCAACGAAGATGCTGGAACTATAAAGGATGAGAGCTATTATCTAAGTGGACAGCCATTAAGTTTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACACTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTCAATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCACAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTCTCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACACCTCCTCCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTCAGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAAAGAAACAATGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGATATTGGAATCTTTAAACTAGCTGATCCGTG                                                                             ]
[+] EMBL CF276054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGAGAATGTCAAGGCGACAGCAACACTGCAGAAGCAAACATACTTGGTGCTCCTGCTGGCTGCTCTGAGGCCCAAGGCACTCCTGGCCAACATACAGATGACCTTGAAGTTATTCCTGCTCACTGCCCTAGTGAGATGCAAGAGAATTCAGTCCAACATGCTCCAGGCCATCTTGAAATCCATGGCATTGTCTGCGACCTTGACAATGATAATGTGACATCTATATCCAGCATAAATGCAGTGGAACCTGATCTTATCCATTCAGCTTCACTTGATGTGCACACAGATTCACTTACCCCAGCAGATGCAGTAATAAATGATGGGCAATCTTGTGNGGGGTTGACAATGATGGGCAAATGTCCAGAGTAATCAATGGGAGAAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB628731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGGCCTAGTCTGCATTGCTTAGCAGTCGATGATATGCATGACCTTTTGTCATCATGGTCAGTGAATCTTCTAGCAACAGTTAGAAAATGGTATACTTCTCAAGGTATTGTTGGCTCTGAAGAAAATTCTGGAGAAGGGCATTGTGTTTGTAGCAGTGATAATGGTTGTGTTCCAAGGGAGTGCACATGCCATTTGGAAAGCAACGAAGATGCTGGAACTATAAAGGATGAGAGCTATTATCTAAGTGGACAGCCATTAAGTTTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACACTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTCAATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCCCAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTCTCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACCCCTCCTCCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTCAGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAGAGAAACAATGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGATATTGGAATCTTTAAAC                                                                                          ]
[-] EMBL CB630609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGTCAGTGAATCTTCTAGCAACAGTTAGAAAATGGTATACTTCTCAAGGTATTGTTGGCTCTGAAGAAAATTCTGGAGAAGGGCATTGTGTTTGTAGCAGTGATAATGGTTGTGTTCCAAGGGAGTGCACATGCCATTTGGAAAGCAACGAAGATGCTGGAACTATAAAGGATGAGAGCTATTATCTAAGTGGACAGCCATTAAGTTTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACACTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTCAATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCACAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTCTCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACACCTCCTCCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTCAGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAGAGAAACAATGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGATATTGGAATCTTTAAACTAGCTGATCCATGATGCTTTCTCAAATCTCATTGTATTATGTATTATAGCTCAATTAAATCACTGAGTTGATCAGTTGAAACAAGA    ]
[-] EMBL CF276055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACACTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTCAATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCACAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTCTCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACACCTCCTCCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTCAGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAAAGAAACAATGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGATATTGGAATCTTTAAACTAGCTGATCCGTGATGCTTTCTCAAATCTCATTGTATTATGTATTATAGCTCAATTAAATCACTGAGTTGATCAGTTGAAACAAAAAAAA]




>consensus_10260#0
TATTTGGATGAGCGAATCTGGTTACCTTCATCTCTTCTGAAGGCATTTGCTTCTATTAAG
CAAGTTATCTTCTCATCTATGGAGAAGAATAATGTGCCTCACACATTTTGGTCTTCCTAT
CTCCCATCTTTGATACAACAGAAAGGTATTGCAAAAAGAATTGCATCAATCTTGTCAGGC
TATGGTCTAATAGCTTATCAACTAGGAAACCATGATTCTGTGTTAAATCACAATGAACAG
CACGAGAAGTTTGATGCCCACAGATTGAATTCCACCGGTTCTCACCCAAAAGGAGGTTTA
GCACATAAATTATCAGGATTTAGAGCTTTAGCTGCTGGAGCGCCCAGATCAGGCCAACAA
CATCTGATCCGTTGCCTTCTTCATGGTTTTGTGGGTCATACTGTAATACACAAGCTTGAT
CTTGCAACTATGGCACAGGAGGGAAACGGTGATATTCTTAGTGGACTCACACAAATTCTT
CTAAAATGCCTTAATCTTGGAAGATGTATAATCTATATGCCTAGAATTGATTTGTGGGCC
ATCGACAAGTTCCATGAACAAGAAGCAGAAGATCATGTGCTCAATGTGGGAACAAGCAAG
TTAGGGTCCACAGCAACAAAAAATATTAAAAAATGTTCTGAAGTATGGAATTCGTTGGTT
GATCAGATGGGTTCATTGTTAGCTTCTGTATCCATCAGTGTTCTGTCCACCAGTGAACTG
AAGTTTCAAGATCTCCCTAGTGGAGTAAGACATTTCTTCAGCACACATGTTGTAGATCAA
TGTCTTGCTTCTTCAGAACACACAATACCAAGGTTCTCTGTGAAATGTGACAGCTACTTT
ACCTGGGATGAGGTTATTGACGCATGCTGTTTGCGGATATCACATGATTTAGTTCAGCAG
CATGTTCAACTTTTGCATGACAGGGCTCATAACAATCATGATGAACAGAAAGAGGTCTTT
GTTCCTATGGAAATTAGTGCACCAGGTGAACATAGATCCAGTGGGAGTAAGGAAGCCAGC
ATGTTAACGAAGTATCCATTGAACATGGACAAGCATCCCTCATGTGGGGTTTCTTCAAGA
GAGCATCCTACTCAGCTGGGCACATGTAGTGCTCAGCAAGAGCCACCAACATCTAATGTT
GAAGATAAAGAGGACAATACTGAGAAAATTGATTTCAATGAGAAAGTCGCAACAAATCGT
TCTAATAGAATTGTGAAGGACAGTGAATCACTAGCTATTATGGCCTTTGGAATTCAGATA
CTACAGCACCCGCAATTTTCTAAACTTTGTTGGGTTACATCGAAACTACGAGAGGGCCCC
TGCACTGATATAAATGGACCATGGAAAGGCTGGCCATTTAATTCCTGTTTATTGCAAAGC
ACTACAGCTGATAAATCATTATCTGGAGGAAACAATGTTCTTAAGGGCAAAGAGAAGATT
CCGTCTGTCAGAGGACTAGTTGCTGTTGGTCTATTAGCATATAGAGGTGCTTATGCATCT
GTTTTGGAAATCTGTTCTGAGGTGAGAAAGGTCTTGGAACTGTTAGTTGGACAGGTCCGA
ACTAAAATTTTGGAAAAGAGAAGTCGATATCGGTACTTCCATATTCTGTCCCAAGTTGCT
TATCTGGATGATATCATGAGCAGCTGGGCATACACCTTTCAAAGGTTACATAGTGAAAAC
AGGAGAGTAAAAACAAGTCCAAAGGTAACTGTTGGAAAGTCATCCACAAGAGAATGTCAA
GGCGACAGCAACACTGCAGAAGCAAACATACTTGGTGCTCCTGCTGGCTGCTCTGAGGCC
CAAGGCACTCCTGGCCAACATACAGATGACCTTGAAGTTATTCCTGCTCACTGCCCTAGT
GAGATGCAAGAGAATTCAGTCCAACATGCTCCAGGCCATCTTGAAATCCATGGCATTGTC
TGCGACCTTGACAATGATAATGTGACATCTATATCCAGCATAAATGCAGTGGAACCTGAT
CTTATCCATTCAGCTTCACTTGATGTGCACACAGATTCACTTACCCCAGCAGATGCAGTA
ATAAATGATGGGCAATCTTGTGGGGTTGACAATGATGGGCAAATGTCCAGAGTAATCAAT
GGAGAAGAAAACCACATATCTAATATTGAAAGACCTGAAAGCCACACAGTATCTGTTGCG
GATTTCAATGAGTTGCAAAGGAAAAATGCTGTTGCATCCTCAACTAGTACCGACAGTGCA
GGAACATCCAGGAACATGGTGTCTTCTGAAGCTCGTGGAAGTGACAATGAGCGGAATACT
GATTTCCCTGTGGATGATGTCAAATTAGGTCATTTGGTTAATCCTCAATCACAGGATACC
ATGAAAAGTCTCTCAGTTCTGAAACCTCCATGTCTCTACAAATGTTGCCCTGTGTGTTTC
AATGCTGTTTATAAGATGGTTCATGATATTCTTTCAAATTCAGTAAGGCCTAGTCTGCAT
TGCTTAGCAGTCGATGATATGCATGACCTTTTGTCATCATGGTCAGTGAATCTTCTAGCA
ACAGTTAGAAAATGGTATACTTCTCAAGGTATTGTTGGCTCTGAAGAAAATTCTGGAGAA
GGGCATTGTGTTTGTAGCAGTGATAATGGTTGTGTTCCAAGGGAGTGCACATGCCATTTG
GAAAGCAACGAAGATGCTGGAACTATAAAGGATGAGAGCTATTATCTAAGTGGACAGCCA
TTAAGTTTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACA
CTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTC
AATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCA
CAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTC
TCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACACCTCCT
CCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTC
AGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAAAGAAACAA
TGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGAT
ATTGGAATCTTTAAACTAGCTGATCCGTGATGCTTTCTCAAATCTCATTGTATTATGTAT
TATAGCTCAATTAAATCACTGAGTTGATCAGTTGAAACAAGAAAAA

consensusID : consensus_10260#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 141
fasta sequence

                              [TGCTCCAGGNNTTGTTGTTATCCATGGCATTGTCTGCGNGTTNACAGTGATAATGTGACATCTATATCCGGCGTAAATGCAGTGGACCTGATCTTATCCATTCAGCTTCACTTGATGTGCACACAGNTTCACTTACCCCAG]

[+] EMBL OS38109              [TGCTCCAGGNNTTGTTGTTATCCATGGCATTGTCTGCGNGTTNACAGTGATAATGTGACATCTATATCCGGCGTAAATGCAGTGGACCTGATCTTATCCATTCAGCTTCACTTGATGTGCACACAGNTTCACTTACCCCAG]




>consensus_10260#1
TGCTCCAGGNNTTGTTGTTATCCATGGCATTGTCTGCGNGTTNACAGTGATAATGTGACA
TCTATATCCGGCGTAAATGCAGTGGACCTGATCTTATCCATTCAGCTTCACTTGATGTGC
ACACAGNTTCACTTACCCCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10260#0      TATTTGGATGAGCGAATCTGGTTACCTTCATCTCTTCTGAAGGCATTTGCTTCTATTAAG 60
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CAAGTTATCTTCTCATCTATGGAGAAGAATAATGTGCCTCACACATTTTGGTCTTCCTAT 120
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CTCCCATCTTTGATACAACAGAAAGGTATTGCAAAAAGAATTGCATCAATCTTGTCAGGC 180
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TATGGTCTAATAGCTTATCAACTAGGAAACCATGATTCTGTGTTAAATCACAATGAACAG 240
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CACGAGAAGTTTGATGCCCACAGATTGAATTCCACCGGTTCTCACCCAAAAGGAGGTTTA 300
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GCACATAAATTATCAGGATTTAGAGCTTTAGCTGCTGGAGCGCCCAGATCAGGCCAACAA 360
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CATCTGATCCGTTGCCTTCTTCATGGTTTTGTGGGTCATACTGTAATACACAAGCTTGAT 420
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CTTGCAACTATGGCACAGGAGGGAAACGGTGATATTCTTAGTGGACTCACACAAATTCTT 480
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CTAAAATGCCTTAATCTTGGAAGATGTATAATCTATATGCCTAGAATTGATTTGTGGGCC 540
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ATCGACAAGTTCCATGAACAAGAAGCAGAAGATCATGTGCTCAATGTGGGAACAAGCAAG 600
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TTAGGGTCCACAGCAACAAAAAATATTAAAAAATGTTCTGAAGTATGGAATTCGTTGGTT 660
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GATCAGATGGGTTCATTGTTAGCTTCTGTATCCATCAGTGTTCTGTCCACCAGTGAACTG 720
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      AAGTTTCAAGATCTCCCTAGTGGAGTAAGACATTTCTTCAGCACACATGTTGTAGATCAA 780
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TGTCTTGCTTCTTCAGAACACACAATACCAAGGTTCTCTGTGAAATGTGACAGCTACTTT 840
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ACCTGGGATGAGGTTATTGACGCATGCTGTTTGCGGATATCACATGATTTAGTTCAGCAG 900
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CATGTTCAACTTTTGCATGACAGGGCTCATAACAATCATGATGAACAGAAAGAGGTCTTT 960
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GTTCCTATGGAAATTAGTGCACCAGGTGAACATAGATCCAGTGGGAGTAAGGAAGCCAGC 1020
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ATGTTAACGAAGTATCCATTGAACATGGACAAGCATCCCTCATGTGGGGTTTCTTCAAGA 1080
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GAGCATCCTACTCAGCTGGGCACATGTAGTGCTCAGCAAGAGCCACCAACATCTAATGTT 1140
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GAAGATAAAGAGGACAATACTGAGAAAATTGATTTCAATGAGAAAGTCGCAACAAATCGT 1200
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TCTAATAGAATTGTGAAGGACAGTGAATCACTAGCTATTATGGCCTTTGGAATTCAGATA 1260
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CTACAGCACCCGCAATTTTCTAAACTTTGTTGGGTTACATCGAAACTACGAGAGGGCCCC 1320
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TGCACTGATATAAATGGACCATGGAAAGGCTGGCCATTTAATTCCTGTTTATTGCAAAGC 1380
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ACTACAGCTGATAAATCATTATCTGGAGGAAACAATGTTCTTAAGGGCAAAGAGAAGATT 1440
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CCGTCTGTCAGAGGACTAGTTGCTGTTGGTCTATTAGCATATAGAGGTGCTTATGCATCT 1500
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GTTTTGGAAATCTGTTCTGAGGTGAGAAAGGTCTTGGAACTGTTAGTTGGACAGGTCCGA 1560
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ACTAAAATTTTGGAAAAGAGAAGTCGATATCGGTACTTCCATATTCTGTCCCAAGTTGCT 1620
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TATCTGGATGATATCATGAGCAGCTGGGCATACACCTTTCAAAGGTTACATAGTGAAAAC 1680
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      AGGAGAGTAAAAACAAGTCCAAAGGTAACTGTTGGAAAGTCATCCACAAGAGAATGTCAA 1740
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GGCGACAGCAACACTGCAGAAGCAAACATACTTGGTGCTCCTGCTGGCTGCTCTGAGGCC 1800
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CAAGGCACTCCTGGCCAACATACAGATGACCTTGAAGTTATTCCTGCTCACTGCCCTAGT 1860
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GAGATGCAAGAGAATTCAGTCCAACATGCTCCAGGCCATCTTGAAATCCATGGCATTGTC 1920
consensus_10260#1      --------------------------TGCTCCAGGNNTTGTTGTTATCCATGGCATTGTC 34
                                                 *********   * ***  ***************

consensus_10260#0      TGCGACCTTGACAATGATAATGTGACATCTATATCCAGCATAAATGCAGTGGAACCTGAT 1980
consensus_10260#1      TGCGNG-TTNACAGTGATAATGTGACATCTATATCCGGCGTAAATGCAGTGGA-CCTGAT 92
                       ****   ** *** ********************** ** ************* ******

consensus_10260#0      CTTATCCATTCAGCTTCACTTGATGTGCACACAGATTCACTTACCCCAGCAGATGCAGTA 2040
consensus_10260#1      CTTATCCATTCAGCTTCACTTGATGTGCACACAGNTTCACTTACCCCAG----------- 141
                       ********************************** **************           

consensus_10260#0      ATAAATGATGGGCAATCTTGTGGGGTTGACAATGATGGGCAAATGTCCAGAGTAATCAAT 2100
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GGAGAAGAAAACCACATATCTAATATTGAAAGACCTGAAAGCCACACAGTATCTGTTGCG 2160
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GATTTCAATGAGTTGCAAAGGAAAAATGCTGTTGCATCCTCAACTAGTACCGACAGTGCA 2220
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GGAACATCCAGGAACATGGTGTCTTCTGAAGCTCGTGGAAGTGACAATGAGCGGAATACT 2280
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GATTTCCCTGTGGATGATGTCAAATTAGGTCATTTGGTTAATCCTCAATCACAGGATACC 2340
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ATGAAAAGTCTCTCAGTTCTGAAACCTCCATGTCTCTACAAATGTTGCCCTGTGTGTTTC 2400
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      AATGCTGTTTATAAGATGGTTCATGATATTCTTTCAAATTCAGTAAGGCCTAGTCTGCAT 2460
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TGCTTAGCAGTCGATGATATGCATGACCTTTTGTCATCATGGTCAGTGAATCTTCTAGCA 2520
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ACAGTTAGAAAATGGTATACTTCTCAAGGTATTGTTGGCTCTGAAGAAAATTCTGGAGAA 2580
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GGGCATTGTGTTTGTAGCAGTGATAATGGTTGTGTTCCAAGGGAGTGCACATGCCATTTG 2640
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      GAAAGCAACGAAGATGCTGGAACTATAAAGGATGAGAGCTATTATCTAAGTGGACAGCCA 2700
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TTAAGTTTTTTCTTTAAAGATGGTGTATTGATACCACCAGATATCACTGCACCAACTACA 2760
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CTTCATTGCAGTTATATGAGATTATGTGTTTGCTCGATACCAGGTTCAATTTCTATGTTC 2820
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      AATCGGATCTCGAGTTGATGTGATTGTGTGATGCAAGGTACTTCAATGCTAAGGATACCA 2880
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CAGTTCTGATCTTTTTCCTGTGCTGGCCTATCTTCAGTGTTTACCAGGTCTTGTGCACTC 2940
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TCATGGGATTTTGCTTGTTTCCCCAGTGGTAGCAGCTAGTTCATTGCAATTACACCTCCT 3000
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      CCCTTGATGCAACTCCCAAGCTAGCCTTCTGCAAATAAATTGCCTTTATTGGTTATGTTC 3060
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      AGCAGTGGAGTGCTGGGTTATATAGTTTTTGGGAAACCTGGATCGACTGAAAAGAAACAA 3120
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TGCTATTGATTTTGTGTCTGTTAAGTGGTTCCGTTGTATACGCAGTCTACTGTTACTGAT 3180
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      ATTGGAATCTTTAAACTAGCTGATCCGTGATGCTTTCTCAAATCTCATTGTATTATGTAT 3240
consensus_10260#1      ------------------------------------------------------------
                                                                                   

consensus_10260#0      TATAGCTCAATTAAATCACTGAGTTGATCAGTTGAAACAAGAAAAA 3286
consensus_10260#1      ----------------------------------------------