These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10269#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3427 fasta sequence [CCGCTCCCCCTGCTGCGCCGGAAACAATGAAATCGCCTTCTTTTGTCCCAAACTCTTCTTCTCCTCTCTTCCCCCCAAACACAACTGAACCCAACCCAACAAACCACCACCACGCTGACCGCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACCTCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT--GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGCTGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTGTGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGTCGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAATGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAGTGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGCAACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAAGGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAGCAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCGCAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGAGTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGAACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATATCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCTCCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGATGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATATGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGATGGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTATCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGATCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGCTGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGTGCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGGCATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAGCATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCCTGCCGGGTTTGCAGAATCGTTCACCTCGGCTGATGGCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK121964 [CCGCTCCCCCTGCTGCGCCGGAAACAATGAAATCGCCTTCTTTTGTCCCAAACTCTTCTTCTCCTCTCTTCCCCCCAAACACAACTGAACCCAACCCAACAAACCACCACCACGCTGACCGCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACCTCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGCTGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTGTGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGTCGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAATGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAGTGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGCAACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAAGGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAGCAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCGCAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGAGTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGAACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATATCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCTCCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGATGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATATGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGATGGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTATCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGATCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGCTGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGTGCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGGCATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAGCATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCCTGCCGGGTTTGCAGAATCGTTCACCTCGGCTGATGGCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCA ] [+] EMBL AK063635 [ TGAACCCAACCCAACAAACCACCACCACGCTGACCGCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACCTCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGC ] [+] EMBL AY224496 [ CTCTTCCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCTCCACGACCTGCGCCGCTCGCTGACCAAMGCCGAAGCCGTCCTCGGCTGGGGCGACCCCAACGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAACAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTTCACCTTTGCCGCGCTCGACGCGCTCCAGGACCTCAGCCTCCAGAACCACAACCTCTCCGGCGACCTCCCGTCCTTCCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCCCGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCTCAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCAGAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCATGAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCACCTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGGCCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTT GGGCCCCGTCCCGGCGATCAAGGCGCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTCGCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGTAGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGGGAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCTTGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGTGCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCTGACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAACTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTCCAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGCTGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTGTGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGTCGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAATGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAGTGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGCAACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAAGGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAGCAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCGCAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGAGTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGAACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATATCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCTCCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGATGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATATGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGATGGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTATCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGATCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGCTGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGTGCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGGCATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAGCATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCCTGCCGGGTTTGCAGAATCGTTCACCTCGGCT ] [+] EMBL OSS1616A [ GCTCAACAACCAGCACGGCGTCCCCAAGCTCTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGGCAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCTCTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGGCGG CTCAAGTCCGTTCAGCTCGACAACAACAATCTCTTTGGGGCC ] [+] EMBL CF328144 [ ATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10269#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence [CAGNTGGAAGCATCCTGANCCTTGAGGACAGCAAGGGCAGCATCCCAGNTCGGCCTGCCGGGTTTGCAGAATCGTTCNCCTCGGCTGATGNCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGNCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATNTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTNGTTTNCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU033042 [CAGNTGGAAGCATCCTGANCCTTGAGGACAGCAAGGGCAGCATCCCAGNTCGGCCTGCCGGGTTTGCAGAATCGTTCNCCTCGGCTGATGNCCGGTGAAGCATCATATATCTACAATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAAGAGTGCATTGNCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATNTTGAGACTGAAGTTTCTGCCTTTTTCTAGTCATCGGGGTCATATAATGCTTCTTTNGTTTNCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10269#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence [CGAGCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAANATGCATTGTCCATGTGCTTATGCTTCTGTANATANACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAAACTGAANTTTCTGCCTTTTTCTANTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCATATCATGAGTCTTGTNCTGTTTAGGGAGCAATTAGTACCAATCCAGGCTTG] [+] EMBL AA752009 [CGAGCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGGTAAAANATGCATTGTCCATGTGCTTATGCTTCTGTANATANACATCCATTTTTCTTTCTTTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAAACTGAANTTTCTGCCTTTTTCTANTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGCAATGGCATCTGGTGGCATCAATGATCCATATCATGAGTCTTGTNCTGTTTAGGGAGCAATTAGTACCAATCCAGGCTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10269#0 CCGCTCCCCCTGCTGCGCCGGAAACAATGAAATCGCCTTCTTTTGTCCCAAACTCTTCTT 60 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CTCCTCTCTTCCCCCCAAACACAACTGAACCCAACCCAACAAACCACCACCACGCTGACC 120 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GCCCTCACCGGCGAGCCAGCGAGCGACGGAAGGAGGCCGCATGCTTCCACAACTACAACC 180 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TCCTCCTCCTCCTCCTCCCGTCTCCAATGCCCTCCGCCTCCACTAGATGGCCGCCCTCTT 240 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CCTCCTCCTCCTCCTCCACGTATCAGACGCCGCCATCAACCCGGGCGACCTGTCCGTGCT 300 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CCACGACCTGCGCCGCTCGCTGACCAACGCCGACGCCGTCCTCGGCTGGGGCGACCCCAA 360 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CGCCGCCGACCCGTGCGCCGCATGGCCGCACATCTCCTGCGACCGCGCCGGCCGCGTCAA 420 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CAACATCGACCTCAAGAACGCCGGCCTCGCCGGGACGCTCCCCTCCACCTTCGCCGCGCT 480 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CGACGCGCTCCAGGACCTCAGCCTCCAGAACAACAACCTCTCCGGCGACCTCCCGTCCTT 540 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CCGCGGCATGGCCTCCCTCCGCCACGCCTTCCTCAACAACAACTCCTTCCGCTCCATCCC 600 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CGCCGACTTCTTCAGCGGCCTCACCTCCCTCCTCGTCATCTCCCTCGACCAGAACCCGCT 660 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CAACGTCTCCTCCGGGGGGTGGACGATCCCCGCCGACGTCGCCGCCGCGCAGCAGCTGCA 720 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GAGCCTCAGCCTCAACGGATGCAACCTCACCGGCGCCATCCCGGACTTCCTCGGCGCCAT 780 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GAACAGCCTCCAGGAGCTCAAGCTCGCCTACAACGCCCTCTCCGGACCCATCCCCTCCAC 840 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CTTCAACGCCTCCGGGTTGCAGACGCTCTGGCTCAACAACCAGCACGGCGTCCCCAAGCT 900 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CTCCGGCACGCTCGACCTCATCGCCACCATGCCCAACCTCGAACAGGCATGGCTCCACGG 960 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CAACGACTTCTCCGGCCCCATCCCGGACTCCATCGCCGACTGCAAGCGCCTCTCCGACCT 1020 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CTGCCTCAACAGCAACCAGCTCGTCGGCCTCGTCCCACCGGCGCTCGAGTCCATGGCCGG 1080 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CCTCAAGTCCGTTCAGCTCGACAACAACAATCTCTTGGGCCCCGTCCCGGCGATCAAGGC 1140 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GCCCAAGTACACCTACTCACAGAACGGGTTCTGCGCCGACAAGCCGGGGGTCGCCTGCTC 1200 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GCCTCAGGTGATGGCATTGCTTCACTTCCTCGCCGAGGTCGATTACCCCAAGAGGCTGGT 1260 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 AGCTAGTTGGTCCGGGAACAATTCCTGCGTGGATTGGCTGGGAATTAGCTGCGTTGCAGG 1320 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GAATGTGACGATGCTCAATTTGCCGGAGTATGGACTCAATGGCACAATCAGCGACAGTCT 1380 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGGGAATCTGAGTGAACTCTCGGACATCAACCTCATCGGAAATAACCTTACTGGGCATGT 1440 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GCCGGATAGCCTCACAAGCCTCAGGTTGCTGCAGAAGCTGGACCTGTCCGGGAACGACCT 1500 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GACCGGGCCGCTGCCCACCTTCAGCCCGAGTGTGAAGGTGAATGTGACCGGCAATCTCAA 1560 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CTTCAATGGGACGGCACCAGGATCAGCGCCATCCAAGGATACTCCTGGGTCTTCGTCGTC 1620 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CAGGGCGCCAACCTTGCCTGGCCAGGGCGTCCTTCCGGAAAATAAGAAGAAAAGATCAGC 1680 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGTTGTGTTGGCCACCACCATCCCGGTTGCAGTCAGTGTGGTGGCTCTGGCTTCAGTGTG 1740 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGCCGTGCTCATCTTCCGTAAGAAAAGGGGATCAGTTCCACCAAATGCAGCTTCCGTCGT 1800 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CGTCCACCCCCGCGAGAATTCTGACCCAGACAACTTGGTCAAGATTGTCATGGTGAACAA 1860 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGATGGCAACAGTAGTTCGACCCAAGGCAATACACTTAGCGGGAGCAGCAGCCGCGCTAG 1920 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGATGTTCACATGATCGATACGGGCAATTTCGTGATTGCTGTGCAGGTCCTCCGTGGCGC 1980 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 AACCAAGAACTTTACCCAGGACAATGTGCTTGGCCGTGGGGGCTTTGGTGTCGTCTACAA 2040 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GGGTGAGCTGCATGACGGCACGATGATTGCTGTGAAGAGGATGGAGGCTGCAGTGATCAG 2100 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CAACAAGGCCTTGGATGAGTTCCAAGCCGAGATTACCATTCTAACCAAGGTACGGCACCG 2160 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CAACCTGGTCTCGATACTGGGTTACTCAATTGAAGGGAATGAGAGGCTGCTGGTCTATGA 2220 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GTACATGTCCAACGGGGCTTTGAGCAAGCATCTGTTCCAGTGGAAGCAGTTTGAATTAGA 2280 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 ACCCCTCTCATGGAAGAAGAGGCTCAATATTGCACTGGATGTTGCTCGTGGGATGGAATA 2340 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TCTGCACAACCTGGCACATCAGTGCTACATCCATAGGGATCTCAAGTCAGCAAACATTCT 2400 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CCTCGGCGACGATTTCCGAGCAAAGGTATCAGACTTTGGGCTAGTTAAACATGCACCAGA 2460 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGGAAACTTCTCTGTGGCAACCAGACTCGCTGGAACTTTTGGGTACTTGGCTCCTGAATA 2520 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGCTGTGACTGGGAAAATCACGACAAAAGCAGATGTCTTCAGCTTTGGGGTAGTGCTGAT 2580 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GGAGCTGATAACTGGAATGACTGCCATTGATGAGAGCCGTCTGGAGGAGGAAACCCGTTA 2640 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TCTGGCCTCATGGTTCTGTCAGATAAGGAAGGATGAAGATAGGCTCAGAGCAGCCATTGA 2700 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TCCTACTCTGGATCAATCTGATGAGACTTTTGAGAGCATCTCCGTGATCGCAGAGCTTGC 2760 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGGCCACTGCACATCCCGGGAACCCACCCAGCGACCGGACATGGGCCACGCCGTGAACGT 2820 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 GCTCGTCCCGATGGTAGAGAAATGGAAGCCTGTGAACGACGAGACCGAGGACTACATGGG 2880 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CATTGATCTGCACCAGCCGTTGCTCCAGATGGTGAAGGGCTGGCAGGACGCAGAGGCCAG 2940 consensus_10269#1 ------------------------------------------------------------ consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 CATGACAGATGGAAGCATCCTGAGCCTTGAGGACAGCAAGGGCAGCATCCCAGCTCGGCC 3000 consensus_10269#1 -----CAGNTGGAAGCATCCTGANCCTTGAGGACAGCAAGGGCAGCATCCCAGNTCGGCC 55 consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 TGCCGGGTTTGCAGAATCGTTCACCTCGGCTGATGGCCGGTGAAGCATCATATATCTACA 3060 consensus_10269#1 TGCCGGGTTTGCAGAATCGTTCNCCTCGGCTGATGNCCGGTGAAGCATCATATATCTACA 115 consensus_10269#2 ------------------------------------------------------------ consensus_10269#0 ATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGG 3120 consensus_10269#1 ATACAAATAAGTACATGTCTCCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGG 175 consensus_10269#2 -----------------CGAGCTCTGGACCTCTCCTGTTTCCCTATAGTGTTCTTGTAGG 43 *************************************** consensus_10269#0 TAAAAGAGTGCATTGTCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCT 3180 consensus_10269#1 TAAAAGAGTGCATTGNCCATGTGCTTATGCTTCTGTAGATAGACATCCATTTTTCTTTCT 235 consensus_10269#2 TAAAANA-TGCATTGTCCATGTGCTTATGCTTCTGTANATANACATCCATTTTTCTTTCT 102 ***** * ******* ********************* *** ****************** consensus_10269#0 TTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAGACTGAAGTTTCTGCCT 3240 consensus_10269#1 TTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATNTTGAGACTGAAGTTTCTGCCT 295 consensus_10269#2 TTTCTTTTTTGGTAGGATTGCTTTCCTATTATTCCAATCTTGAAACTGAANTTTCTGCCT 162 ************************************** **** ****** ********* consensus_10269#0 TTTTCTAGTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGC 3300 consensus_10269#1 TTTTCTAGTCATCGGGGTCATATAATGCTTCTTTNGTTTNCTGTA--------------- 340 consensus_10269#2 TTTTCTANTCATCGGGGTCATATAATGCTTCTTTAGTTTACTGTACTTGAAAATTTTTGC 222 ******* ************************** **** ***** consensus_10269#0 AATGGCATCTGGTGGCATCAATGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3360 consensus_10269#1 ---------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 373 consensus_10269#2 AATGGCATCTGGTGGCATCAATGATCCATATCATGAGTCTTGTNCTGTTTAGGGAGCAAT 282 * * * * * * ** consensus_10269#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3420 consensus_10269#1 AAAAAAAAAAAAA----------------------------------------------- 386 consensus_10269#2 TAGTACCAATCCAGGCTTG----------------------------------------- 301 * * ** * consensus_10269#0 AAAAAAA 3427 consensus_10269#1 ------- consensus_10269#2 ------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||