cluster # 1028

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Oryza sativa
cluster # 1028 cluster # 1028 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1028#0 length = 741 sequences # 2

consensusID : consensus_1028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 741
fasta sequence

                              [TCCCATCTCTTTCCTCCTCCTCCTCTCTGATATGTCTACTATCTACATGAGCCAGCTACCTGCTACTCTCCCTCTAATGGAGGGGGATCAGGATCAGGGGCTCTACCCAGCCTTCCATAGAGCAAAGGACCCTCCTATCTTGTTCCCTTTCATGATCGACAGCGCCGTCGAGCACCAAGGGCAAATCTATGGAGATCAGGGCTTGAGGAGGCAGCAGGTTTTGGGTGAATCCAATCAACAGTTCAATGATCACATGATGATGGGCGGATCAGATGTCTTCCTCACACCGTCTCCGTTCCGACCAACCATCCAAAGCATCGGCAGCGACATGATCCAGCGATCATCTTATGATCCATACGATATCGAGAGTAACAACAAGCAGCATGCCAATGGATCAACCAGCAAGTGGATGTCGACGCCGCCAATGAAGATGAGGATCATAAGGAAGGGGGCGGCAACCGATCCTGAGGGCGGGGCGGTGAGAAAGCCAAGGAGAAGAGCACAAGCGCACCAGGATGAGAGCCAGCAACAACTGCAGCAAGCTTTGGGTGTCGTTAGAGTGTGCTCGGACTGCAACACCACCAAGACCCCCTTGTGGAGAAGTGGTCCTTGTGGCCCCAAGTCCCTTTGCAACGCGTGTGGCATCAGGCAAAGGAAGGCGCGGCGGGCGATGGCCGCTGCTGCCAACGGCGGAGCGGCGGTGGCGCCGGCAAAGAGCGTGGCCGCGGCGCCGGTGAACAA]

[+] EMBL AK099607             [TCCCATCTCTTTCCTCCTCCTCCTCTCTGATATGTCTACTATCTACATGAGCCAGCTACCTGCTACTCTCCCTCTAATGGAGGGGGATCAGGATCAGGGGCTCTACCCAGCCTTCCATAGAGCAAAGGACCCTCCTATCTTGTTCCCTTTCATGATCGACAGCGCCGTCGAGCACCAAGGGCAAATCTATGGAGATCAGGGCTTGAGGAGGCAGCAGGTTTTGGGTGAATCCAATCAACAGTTCAATGATCACATGATGATGGGCGGATCAGATGTCTTCCTCACACCGTCTCCGTTCCGACCAACCATCCAAAGCATCGGCAGCGACATGATCCAGCGATCATCTTATGATCCATACGATATCGAGAGTAACAACAAGCAGCATGCCAATGGATCAACCAGCAAGTGGATGTCGACGCCGCCAATGAAGATGAGGATCATAAGGAAGGGGGCGGCAACCGATCCTGAGGGCGGGGCGGTGAGAAAGCCAAGGAGAAGAGCACAAGCGCACCAGGATGAGAGCCAGCAACAACTGCAGCAAGCTTTGGGTGTCGTTAGAGTGTGCTCGGACTGCAACACCACCAAGACCCCCTTGTGGAGAAGTGGTCCTTGTGGCCCCAAGTCCCTTTGCAACGCGTGTGGCATCAGGCAAAGGAAGGCGCGGCGGGCGATGGCCGCTGCTGCCAACGGCGGAGCGGCGGTGGCGCCGGCAAAGAGCGTGGCCGCGGCGCCGGTGAACAA]
[+] EMBL BI811618             [                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAGATGAGGATCATAAGGAA GGGGC GCAACCGATCCTGA GGC GGGCGGTGAGAAAGCCAAGGAGAAGAGCACAAGCGCA CAGGATGAGAGCCA CAACAACTGCAGCAAGCTTT GGT TCGTTAGAGTGTGCTCGGACTGC ACACCACCAAGACCCCCTTGTGGAGAA TGGTCCTTGTGGCCCCAAGTCCCTTTGCAACGCGTGTGGCATCAGGCAAAGGAAGGCGCGGCGGGCGATGGCCGCTGCTGCCAACGGCGGA C GCGGTGGC CCGGCAAAGAGCGTGGCCGCGGCGCCGGTGAACAA]




>consensus_1028#0
TCCCATCTCTTTCCTCCTCCTCCTCTCTGATATGTCTACTATCTACATGAGCCAGCTACC
TGCTACTCTCCCTCTAATGGAGGGGGATCAGGATCAGGGGCTCTACCCAGCCTTCCATAG
AGCAAAGGACCCTCCTATCTTGTTCCCTTTCATGATCGACAGCGCCGTCGAGCACCAAGG
GCAAATCTATGGAGATCAGGGCTTGAGGAGGCAGCAGGTTTTGGGTGAATCCAATCAACA
GTTCAATGATCACATGATGATGGGCGGATCAGATGTCTTCCTCACACCGTCTCCGTTCCG
ACCAACCATCCAAAGCATCGGCAGCGACATGATCCAGCGATCATCTTATGATCCATACGA
TATCGAGAGTAACAACAAGCAGCATGCCAATGGATCAACCAGCAAGTGGATGTCGACGCC
GCCAATGAAGATGAGGATCATAAGGAAGGGGGCGGCAACCGATCCTGAGGGCGGGGCGGT
GAGAAAGCCAAGGAGAAGAGCACAAGCGCACCAGGATGAGAGCCAGCAACAACTGCAGCA
AGCTTTGGGTGTCGTTAGAGTGTGCTCGGACTGCAACACCACCAAGACCCCCTTGTGGAG
AAGTGGTCCTTGTGGCCCCAAGTCCCTTTGCAACGCGTGTGGCATCAGGCAAAGGAAGGC
GCGGCGGGCGATGGCCGCTGCTGCCAACGGCGGAGCGGCGGTGGCGCCGGCAAAGAGCGT
GGCCGCGGCGCCGGTGAACAA

clustalw multiple alignements is not computed in this case