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Oryza sativa
cluster # 10292 cluster # 10292       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10292#0 length = 2452 sequences # 4  
consensus_10292#1 length = 815 sequences # 3  

consensusID : consensus_10292#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2452
fasta sequence
                              [AACAACCCCTCCGCGCCTCTCTTCCGCCATGCCTTCTCCACCCTCGACACGCCGGAACCACCTCCCCCGGAGACCGAGGCCGAGGCCGAGGCTGTGCCGGAGGTGACGCCGGCGGAGGCGGCGGCGGCGACCCCCAACCCGCCCCGCCGCGAGGAGCCCCTCCACGAGACCATCCTCTACATGATCCGCCGCCGCCCGTGGACCACCCGCCTCGAGAACTCCATCCGCCTGCTCTCCCCGACGCTCGCCGCGCCGCTCGTCCACGGCGTCATCTCCGGGGCCGCCGCCGCCGGCCGCGCCGACCTCGCCCTCCAGTTCTTCCGCTTCGCCTACCGTCGCGCCGGCTTCAGCCCCGAGCCAGCCACCTTCTCCCTCCTCATCCCGATCCTCGCCTCCCACCGCATGCTCAACCACGCCCGCTGCATCCTCCTCGACACCATGCCCTCCTTCTCCATCGCCCCCGAGGAGGCCACCGTCGCCGCCCTCATCGCCGCCTACGGCAAGGCCAACATCCCGCAGGAATCCGTTAAGCTCTTCCGCTTGATGCCCGACCTCGGCATCGCCCGCACCGCGCTCTCCTACAACGCCGTCCTCAAGGCCATCCTCTGCCGCGGCCGAGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCCGACGCCGTCACCCCTGACCTGTCCACCTACAACACATTGATCTGGGGGTTCGGCCTGTGCAAGAAGATGGAGGCAGCCTTGAGGGTGTTCGGGGACATGAAGGATCACGGGGTGACACCGGATGTGACGACGTACAACACTCTTCTCAATGCTTGGGTTCGGGCGGGTGATCTGGAGAGTGCCCGCAAAGTGTTTGACGAAATGCCAGGAGCTGGTTTTGCACAAAACTCGGTGTCGTACAATGTCATGATCAAGGGATATGTTGAAGCAGGTAAGGTGGAGGAGGCAGTGGGGCTGTTCTCGGAAATGGGGGAGAAGGGGTTGAGGTTGAGCGAGAAGACGTTTGCTGCTCTGATGCCAGGGCTCTGTGATGATGAGGGAAGGGTTGTGGAGGCCCGGAAGGCAATGGATGACATGGCGGAGCGGCGGCTCACTCCAAAGGACAAGTCAGTGTTTTTGAGGCTTGTGACGACGCTATGCCGAGCGGGTGACTTGGATGGTGCGTTGGATGTGCACCAGAAGAGTGGGCAGTTCAAGCATGTTCTTGTGGATCCAAGACAGTATGGGGTGCTGATGGAGAGCTTGTGCGCGGGTGGAAAGTGTGATGGTGCTGTTGAGGTGATGGATGAGCTTCTTGAGAAGGGGACACTGTTGAGCCCAAAGAGCCCTGTGCTTGAAGGGCCAGCTTATAATCCAGTGATTGAGTATTTGTGCAGCAATGGGAACACCAGCAAGGCTGAGACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAGGCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAGGAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTGCTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGTATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACAGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTG-CTG-ATTGCCCTCTGCGAGAATGACAAAGTGATGGAGG-CACAT-AAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAG-CAGACATTTTGTCTAGGATATTGG-CAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGATAGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAATTTCATTGAGAAATTGAGC]

[+] EMBL AK073200             [AACAACCCCTCCGCGCCTCTCTTCCGCCATGCCTTCTCCACCCTCGACACGCCGGAACCACCTCCCCCGGAGACCGAGGCCGAGGCCGAGGCTGTGCCGGAGGTGACGCCGGCGGAGGCGGCGGCGGCGACCCCCAACCCGCCCCGCCGCGAGGAGCCCCTCCACGAGACCATCCTCTACATGATCCGCCGCCGCCCGTGGACCACCCGCCTCGAGAACTCCATCCGCCTGCTCTCCCCGACGCTCGCCGCGCCGCTCGTCCACGGCGTCATCTCCGGGGCCGCCGCCGCCGGCCGCGCCGACCTCGCCCTCCAGTTCTTCCGCTTCGCCTACCGTCGCGCCGGCTTCAGCCCCGAGCCAGCCACCTTCTCCCTCCTCATCCCGATCCTCGCCTCCCACCGCATGCTCAACCACGCCCGCTGCATCCTCCTCGACACCATGCCCTCCTTCTCCATCGCCCCCGAGGAGGCCACCGTCGCCGCCCTCATCGCCGCCTACGGCAAGGCCAACATCCCGCAGGAATCCGTTAAGCTCTTCCGCTTGATGCCCGACCTCGGCATCGCCCGCACCGCGCTCTCCTACAACGCCGTCCTCAAGGCCATCCTCTGCCGCGGCCGAGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCCGACGCCGTCACCCCTGACCTGTCCACCTACAACACATTGATCTGGGGGTTCGGCCTGTGCAAGAAGATGGAGGCAGCCTTGAGGGTGTTCGGGGACATGAAGGATCACGGGGTGACACCGGATGTGACGACGTACAACACTCTTCTCAATGCTTGGGTTCGGGCGGGTGATCTGGAGAGTGCCCGCAAAGTGTTTGACGAAATGCCAGGAGCTGGTTTTGCACAAAACTCGGTGTCGTACAATGTCATGATCAAGGGATATGTTGAAGCAGGTAAGGTGGAGGAGGCAGTGGGGCTGTTCTCGGAAATGGGGGAGAAGGGGTTGAGGTTGAGCGAGAAGACGTTTGCTGCTCTGATGCCAGGGCTCTGTGATGATGAGGGAAGGGTTGTGGAGGCCCGGAAGGCAATGGATGACATGGCGGAGCGGCGGCTCACTCCAAAGGACAAGTCAGTGTTTTTGAGGCTTGTGACGACGCTATGCCGAGCGGGTGACTTGGATGGTGCGTTGGATGTGCACCAGAAGAGTGGGCAGTTCAAGCATGTTCTTGTGGATCCAAGACAGTATGGGGTGCTGATGGAGAGCTTGTGCGCGGGTGGAAAGTGTGATGGTGCTGTTGAGGTGATGGATGAGCTTCTTGAGAAGGGGACACTGTTGAGCCCAAAGAGCCCTGTGCTTGAAGGGCCAGCTTATAATCCAGTGATTGAGTATTTGTGCAGCAATGGGAACACCAGCAAGGCTGAGACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAGGCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAGGAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTGCTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGTATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACAGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTG CTG ATTGCCCTCTGCGAGAATGACAAAGTGATGGAGG CACAT AAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAG CAGACATTTTGTCTAGGATATTGG CAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGATAGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAATTTCATTGAGAAATTGAGC]
[+] EMBL CB634804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAGGCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAGGAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTGCTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGTATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACGGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTG CTG ATTGCCCTCTGCGAGAATGACAAAGTGATGGAGG CACAT AAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAG CAGACATTTTGTCTAGGATATTGG CAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGG TTATCCATTCATGAGAAGATAGTAC                                                                                                                                                                                                                                   ]
[+] EMBL C27391               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTG CTG ATTGCCCTCTGCGAGAATGACAAAGTGATGGAGG CACAT AAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTG AAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAG CAGACATTTTGTCTAGGATATTGG CAGAGAATGCATCATCAACATCCANGAGGGGCAAACGGGTTTCCATGGGTTCGT  CGGTTTATCCATTCATGAGAAGATAGTACTAT                                                                                                                                                                                                                                ]
[+] EMBL AU100939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGGAGGAAGCATTC GCCCTGTC ATNTGATGGTGGAAAATGGATGCTTGCCNGATCTAGATAAGTTGCCTGAATTGCCCTTTGCGAG ATGACAAAGTGATGGAGGCCACATAAAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATG CCTGATGGACAGCTTAAAAGCTGGAGGGTACTC AAGCAAGCCAGACATTTTGTCTAGGATATTGGTCAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGATAGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAATTTCATTGAGAAAaaaaa ]


>consensus_10292#0 AACAACCCCTCCGCGCCTCTCTTCCGCCATGCCTTCTCCACCCTCGACACGCCGGAACCA CCTCCCCCGGAGACCGAGGCCGAGGCCGAGGCTGTGCCGGAGGTGACGCCGGCGGAGGCG GCGGCGGCGACCCCCAACCCGCCCCGCCGCGAGGAGCCCCTCCACGAGACCATCCTCTAC ATGATCCGCCGCCGCCCGTGGACCACCCGCCTCGAGAACTCCATCCGCCTGCTCTCCCCG ACGCTCGCCGCGCCGCTCGTCCACGGCGTCATCTCCGGGGCCGCCGCCGCCGGCCGCGCC GACCTCGCCCTCCAGTTCTTCCGCTTCGCCTACCGTCGCGCCGGCTTCAGCCCCGAGCCA GCCACCTTCTCCCTCCTCATCCCGATCCTCGCCTCCCACCGCATGCTCAACCACGCCCGC TGCATCCTCCTCGACACCATGCCCTCCTTCTCCATCGCCCCCGAGGAGGCCACCGTCGCC GCCCTCATCGCCGCCTACGGCAAGGCCAACATCCCGCAGGAATCCGTTAAGCTCTTCCGC TTGATGCCCGACCTCGGCATCGCCCGCACCGCGCTCTCCTACAACGCCGTCCTCAAGGCC ATCCTCTGCCGCGGCCGAGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCCGAC GCCGTCACCCCTGACCTGTCCACCTACAACACATTGATCTGGGGGTTCGGCCTGTGCAAG AAGATGGAGGCAGCCTTGAGGGTGTTCGGGGACATGAAGGATCACGGGGTGACACCGGAT GTGACGACGTACAACACTCTTCTCAATGCTTGGGTTCGGGCGGGTGATCTGGAGAGTGCC CGCAAAGTGTTTGACGAAATGCCAGGAGCTGGTTTTGCACAAAACTCGGTGTCGTACAAT GTCATGATCAAGGGATATGTTGAAGCAGGTAAGGTGGAGGAGGCAGTGGGGCTGTTCTCG GAAATGGGGGAGAAGGGGTTGAGGTTGAGCGAGAAGACGTTTGCTGCTCTGATGCCAGGG CTCTGTGATGATGAGGGAAGGGTTGTGGAGGCCCGGAAGGCAATGGATGACATGGCGGAG CGGCGGCTCACTCCAAAGGACAAGTCAGTGTTTTTGAGGCTTGTGACGACGCTATGCCGA GCGGGTGACTTGGATGGTGCGTTGGATGTGCACCAGAAGAGTGGGCAGTTCAAGCATGTT CTTGTGGATCCAAGACAGTATGGGGTGCTGATGGAGAGCTTGTGCGCGGGTGGAAAGTGT GATGGTGCTGTTGAGGTGATGGATGAGCTTCTTGAGAAGGGGACACTGTTGAGCCCAAAG AGCCCTGTGCTTGAAGGGCCAGCTTATAATCCAGTGATTGAGTATTTGTGCAGCAATGGG AACACCAGCAAGGCTGAGACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAG GCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAG GAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTG CTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGT ATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTT TTCAACAGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGG GTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCAT GTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTA GATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCT GATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAG GCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAAC AAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGA GGGTACTCAAAGCAAGCAGACATTTTGTCTAGGATATTGGCAGAGAATGCATCATCAACA TCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGAT AGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTG AGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCT TTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATG TTTAATAATCAATGAAGATGTACTTGCTATGAATTTCATTGAGAAATTGAGC



consensusID : consensus_10292#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 815
fasta sequence
                              [CAGGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACGGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAGCAGACATTTTGTTTAGGATATTGGCAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGAT-AGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAAAAAAAAAAAAG]

[-] EMBL CB634805             [CAGGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACGGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAGCAGACATTTTGTTTAGGATATTGGCAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGAT AGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAAAAAAAAAAAAG]
[+] EMBL C28127               [                                                                                                                                                                           GTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTGCTGATTGCCCTCTGCGAGAATNACAAAGTGATGGAGGCACATAAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGT                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU108884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAGAGAATGCATNNTCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGATCAGTANTATCTTCCTTTTGAATTGAAGAGCAGTGTTTNATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTNTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCNACATTTAGTTATGTACCATGCCTTAGCAAAAGNAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAAAAA        ]


>consensus_10292#1 CAGGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACGGT GGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAG AACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAA GCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTG CTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCTGATTTTGCA TTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTAC ACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGT GTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCA AAGCAAGCAGACATTTTGTTTAGGATATTGGCAGAGAATGCATCATCAACATCCAAGAGG GGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGATAGTACTATC TTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGG CCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTT TTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAAT CAATGAAGATGTACTTGCTATGAAAAAAAAAAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10292#0      AACAACCCCTCCGCGCCTCTCTTCCGCCATGCCTTCTCCACCCTCGACACGCCGGAACCA 60
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      CCTCCCCCGGAGACCGAGGCCGAGGCCGAGGCTGTGCCGGAGGTGACGCCGGCGGAGGCG 120
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GCGGCGGCGACCCCCAACCCGCCCCGCCGCGAGGAGCCCCTCCACGAGACCATCCTCTAC 180
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      ATGATCCGCCGCCGCCCGTGGACCACCCGCCTCGAGAACTCCATCCGCCTGCTCTCCCCG 240
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      ACGCTCGCCGCGCCGCTCGTCCACGGCGTCATCTCCGGGGCCGCCGCCGCCGGCCGCGCC 300
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GACCTCGCCCTCCAGTTCTTCCGCTTCGCCTACCGTCGCGCCGGCTTCAGCCCCGAGCCA 360
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GCCACCTTCTCCCTCCTCATCCCGATCCTCGCCTCCCACCGCATGCTCAACCACGCCCGC 420
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      TGCATCCTCCTCGACACCATGCCCTCCTTCTCCATCGCCCCCGAGGAGGCCACCGTCGCC 480
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GCCCTCATCGCCGCCTACGGCAAGGCCAACATCCCGCAGGAATCCGTTAAGCTCTTCCGC 540
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      TTGATGCCCGACCTCGGCATCGCCCGCACCGCGCTCTCCTACAACGCCGTCCTCAAGGCC 600
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      ATCCTCTGCCGCGGCCGAGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCCGAC 660
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GCCGTCACCCCTGACCTGTCCACCTACAACACATTGATCTGGGGGTTCGGCCTGTGCAAG 720
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      AAGATGGAGGCAGCCTTGAGGGTGTTCGGGGACATGAAGGATCACGGGGTGACACCGGAT 780
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GTGACGACGTACAACACTCTTCTCAATGCTTGGGTTCGGGCGGGTGATCTGGAGAGTGCC 840
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      CGCAAAGTGTTTGACGAAATGCCAGGAGCTGGTTTTGCACAAAACTCGGTGTCGTACAAT 900
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GTCATGATCAAGGGATATGTTGAAGCAGGTAAGGTGGAGGAGGCAGTGGGGCTGTTCTCG 960
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GAAATGGGGGAGAAGGGGTTGAGGTTGAGCGAGAAGACGTTTGCTGCTCTGATGCCAGGG 1020
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      CTCTGTGATGATGAGGGAAGGGTTGTGGAGGCCCGGAAGGCAATGGATGACATGGCGGAG 1080
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      CGGCGGCTCACTCCAAAGGACAAGTCAGTGTTTTTGAGGCTTGTGACGACGCTATGCCGA 1140
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GCGGGTGACTTGGATGGTGCGTTGGATGTGCACCAGAAGAGTGGGCAGTTCAAGCATGTT 1200
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      CTTGTGGATCCAAGACAGTATGGGGTGCTGATGGAGAGCTTGTGCGCGGGTGGAAAGTGT 1260
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GATGGTGCTGTTGAGGTGATGGATGAGCTTCTTGAGAAGGGGACACTGTTGAGCCCAAAG 1320
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      AGCCCTGTGCTTGAAGGGCCAGCTTATAATCCAGTGATTGAGTATTTGTGCAGCAATGGG 1380
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      AACACCAGCAAGGCTGAGACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAG 1440
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAG 1500
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      GAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTG 1560
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      CTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGT 1620
consensus_10292#1      ------------------------------------------------------------
                                                                                   

consensus_10292#0      ATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTT 1680
consensus_10292#1      ---------CAGGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTT 51
                                ** ************************************************

consensus_10292#0      TTCAACAGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGG 1740
consensus_10292#1      TTCAACGGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGG 111
                       ****** *****************************************************

consensus_10292#0      GTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCAT 1800
consensus_10292#1      GTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCAT 171
                       ************************************************************

consensus_10292#0      GTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTA 1860
consensus_10292#1      GTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTA 231
                       ************************************************************

consensus_10292#0      GATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCT 1920
consensus_10292#1      GATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCT 291
                       ************************************************************

consensus_10292#0      GATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAG 1980
consensus_10292#1      GATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAG 351
                       ************************************************************

consensus_10292#0      GCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAAC 2040
consensus_10292#1      GCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAAC 411
                       ************************************************************

consensus_10292#0      AAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGA 2100
consensus_10292#1      AAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGA 471
                       ************************************************************

consensus_10292#0      GGGTACTCAAAGCAAGCAGACATTTTGTCTAGGATATTGGCAGAGAATGCATCATCAACA 2160
consensus_10292#1      GGGTACTCAAAGCAAGCAGACATTTTGTTTAGGATATTGGCAGAGAATGCATCATCAACA 531
                       **************************** *******************************

consensus_10292#0      TCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGAT 2220
consensus_10292#1      TCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGAT 591
                       ************************************************************

consensus_10292#0      AGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTG 2280
consensus_10292#1      AGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTG 651
                       ************************************************************

consensus_10292#0      AGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCT 2340
consensus_10292#1      AGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCT 711
                       ************************************************************

consensus_10292#0      TTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATG 2400
consensus_10292#1      TTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATG 771
                       ************************************************************

consensus_10292#0      TTTAATAATCAATGAAGATGTACTTGCTATGAATTTCATTGAGAAATTGAGC 2452
consensus_10292#1      TTTAATAATCAATGAAGATGTACTTGCTATGAAAAAAAAAAAAG-------- 815
                       *********************************    *   *          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)