cluster # 10293

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Oryza sativa
cluster # 10293 cluster # 10293 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10293#0 length = 1898 sequences # 2

consensus_10293#1 length = 816 sequences # 4
consensus_10293#2 length = 693 sequences # 1

consensusID : consensus_10293#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1898
fasta sequence

                              [GCCAACCATTTTCCTGGATCACTGTCAATAGTCTGGTACGTCTCCCCACGTTTATACATATTACTGCTTTCCCTGCTTTGGGACTTTTTTTTTTAATTCGACATTATTGATTTTAAGTTTTTGTGATATAACTTTGATCGCTACTTTTATATACTTATAACAATACTCTCTCTTTTACTTGACATTTTGACTTCTCGTAGTCACCACTCACCAATATACAGCTGTAATCATTCTCTTTTGCAATTTTTAATTTTTAATGTATATATTTCATACATCTATTCTGTACATTTTTTGCTATCTTGATGATCAACATTTGGAAAGTTTGATGGCATGTATTCTATTCTAGGTGACAAGTAAAAAGGAACAGATGGAGTAAGTACTTTTAGAAAAATCTAGTAGAGTAGTTTCCATATTATCCAATATGGGTATTATAGTTTCCATTAATACCACCTCCATTTTTAAACATATGACACTGTTGGCTTTTGGACATACGACCATCCATCTTATCAAAAGGATATGTATCACTTATTTTTTTGTGACTTGTTTTTATCATTAAAGATACTTTAAGCATGACTACATTTTTGCATAAAATTTTTTAATAAGACAAATGGTCAAATGTATGTCCAAAAATCAATAGCTTCGTATATTTAAAAATGGAGAGTATTAATGGTCAAGTTTTTACTACATGGACATGAAATTTTAAAAAAAAAGGAAGGAAATGCTCATTTTGTTTGTTTTTTTACACGTGCATATGTGGATACATGCACTATCACCAACGTAATGATGCACGTTTAAATTCAAATCTTCTGTTCATTATCATGTCGTGCACAAATCATGAAGCACGTTGGACTGATAGGATAGTGCATATGCAGAGATTCATTTCTCTTTCACATAACTATAACCTTCTGTTAATACAAATCAGTTTATTCCTTTTAATATTTTCGTTTTTTTTTTGTTGCAAGCTTTAATGACCATTTGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAGCATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTCTAGTTCTAAAGTGGGCAAGTATCACAGTATTTTTTTCCTCTATGCACACCTCAAATATAGCTATATTTTCGCGTGAAAAAGGGTCTGGCGATATTCAAAAGCAAAATTGGAAATTTATAGCTTGTAGAATACATGAACTCTTGCTTTCTTTCCTTGTGTTTTATTCAGATACAGATTGGTCTGAAATCTTCAAGTATATATATAGCCTTACAGCGTGACACGTTGATGATGTGCCCCGTGCTGTTAACATTGTAATTTTTTTTATAAAAAAGAAAATCTT]

[+] EMBL CB649163             [GCCAACCATTTTCCTGGATCACTGTCAATAGTCTGGTACGTCTCCCCACGTTTATACATATTACTGCTTTCCCTGCTTTGGGACTTTTTTTTTTAATTCGACATTATTGATTTTAAGTTTTTGTGATATAACTTTGATCGCTACTTTTATATACTTATAACAATACTCTCTCTTTTACTTGACATTTTGACTTCTCGTAGTCACCACTCACCAATATACAGCTGTAATCATTCTCTTTTGCAATTTTTAATTTTTAATGTATATATTTCATACATCTATTCTGTACATTTTTTGCTATCTTGATGATCAACATTTGGAAAGTTTGATGGCATGTATTCTATTCTAGGTGACAAGTAAAAAGGAACAGATGGAGTAAGTACTTTTAGAAAAATCTAGTAGAGTAGTTTCCATATTATCCAATATGGGTATTATAGTTTCCATTAATACCACCTCCATTTTTAAACATATGACACTGTTGGCTTTTGGACATACGACCATCCATCTTATCAAAAGGATATGTATCACTTATTTTTTTGTGACTTGTTTTTATCATTAAAGATACTTTAAGCATGACTACATTTTTGCATAAAATTTTTTAATAAGACAAATGGTCAAATGTATGTCCAAAAATCAATAGCTTCGTATATTTAAAAATGGAGAGTATTAATGGTCAAGTTTTTACTACATGGACATGAAATTTTAAAAAAAAAGGAAGGAAATGCTCATTTTGTTTGTTTTTTTACACGTGCATATGTGGATACATGCACTATCACCAACGTAATGATGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK071866             [                                                                                                                                                TTTTATATACTTATAACAATACTCTCTCTTTTACTTGACATTTTGACTTCTCGTAGTCACCACTCACCAATATACAGCTGTAATCATTCTCTTTTGCAATTTTTAATTTTTAATGTATATATTTCATACATCTATTCTGTACATTTTTTGCTATCTTGATGATCAACATTTGGAAAGTTTGATGGCATGTATTCTATTCTAGGTGACAAGTAAAAAGGAACAGATGGAGTAAGTACTTTTAGAAAAATCTAGTAGAGTAGTTTCCATATTATCCAATATGGGTATTATAGTTTCCATTAATACCACCTCCATTTTTAAACATATGACACTGTTGGCTTTTGGACATACGACCATCCATCTTATCAAAAGGATATGTATCACTTATTTTTTTGTGACTTGTTTTTATCATTAAAGATACTTTAAGCATGACTACATTTTTGCATAAAATTTTTTAATAAGACAAATGGTCAAATGTATGTCCAAAAATCAATAGCTTCGTATATTTAAAAATGGAGAGTATTAATGGTCAAGTTTTTACTACATGGACATGAAATTTTAAAAAAAAAGGAAGGAAATGCTCATTTTGTTTGTTTTTTTACACGTGCATATGTGGATACATGCACTATCACCAACGTAATGATGCACGTTTAAATTCAAATCTTCTGTTCATTATCATGTCGTGCACAAATCATGAAGCACGTTGGACTGATAGGATAGTGCATATGCAGAGATTCATTTCTCTTTCACATAACTATAACCTTCTGTTAATACAAATCAGTTTATTCCTTTTAATATTTTCGTTTTTTTTTTGTTGCAAGCTTTAATGACCATTTGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAGCATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTCTAGTTCTAAAGTGGGCAAGTATCACAGTATTTTTTTCCTCTATGCACACCTCAAATATAGCTATATTTTCGCGTGAAAAAGGGTCTGGCGATATTCAAAAGCAAAATTGGAAATTTATAGCTTGTAGAATACATGAACTCTTGCTTTCTTTCCTTGTGTTTTATTCAGATACAGATTGGTCTGAAATCTTCAAGTATATATATAGCCTTACAGCGTGACACGTTGATGATGTGCCCCGTGCTGTTAACATTGTAATTTTTTTTATAAAAAAGAAAATCTT]




>consensus_10293#0
GCCAACCATTTTCCTGGATCACTGTCAATAGTCTGGTACGTCTCCCCACGTTTATACATA
TTACTGCTTTCCCTGCTTTGGGACTTTTTTTTTTAATTCGACATTATTGATTTTAAGTTT
TTGTGATATAACTTTGATCGCTACTTTTATATACTTATAACAATACTCTCTCTTTTACTT
GACATTTTGACTTCTCGTAGTCACCACTCACCAATATACAGCTGTAATCATTCTCTTTTG
CAATTTTTAATTTTTAATGTATATATTTCATACATCTATTCTGTACATTTTTTGCTATCT
TGATGATCAACATTTGGAAAGTTTGATGGCATGTATTCTATTCTAGGTGACAAGTAAAAA
GGAACAGATGGAGTAAGTACTTTTAGAAAAATCTAGTAGAGTAGTTTCCATATTATCCAA
TATGGGTATTATAGTTTCCATTAATACCACCTCCATTTTTAAACATATGACACTGTTGGC
TTTTGGACATACGACCATCCATCTTATCAAAAGGATATGTATCACTTATTTTTTTGTGAC
TTGTTTTTATCATTAAAGATACTTTAAGCATGACTACATTTTTGCATAAAATTTTTTAAT
AAGACAAATGGTCAAATGTATGTCCAAAAATCAATAGCTTCGTATATTTAAAAATGGAGA
GTATTAATGGTCAAGTTTTTACTACATGGACATGAAATTTTAAAAAAAAAGGAAGGAAAT
GCTCATTTTGTTTGTTTTTTTACACGTGCATATGTGGATACATGCACTATCACCAACGTA
ATGATGCACGTTTAAATTCAAATCTTCTGTTCATTATCATGTCGTGCACAAATCATGAAG
CACGTTGGACTGATAGGATAGTGCATATGCAGAGATTCATTTCTCTTTCACATAACTATA
ACCTTCTGTTAATACAAATCAGTTTATTCCTTTTAATATTTTCGTTTTTTTTTTGTTGCA
AGCTTTAATGACCATTTGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAGC
ATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCAT
AGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCT
TTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGT
AGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACA
ATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGG
ACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGG
ACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCG
TCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGT
TCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATG
ACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTCTA
GTTCTAAAGTGGGCAAGTATCACAGTATTTTTTTCCTCTATGCACACCTCAAATATAGCT
ATATTTTCGCGTGAAAAAGGGTCTGGCGATATTCAAAAGCAAAATTGGAAATTTATAGCT
TGTAGAATACATGAACTCTTGCTTTCTTTCCTTGTGTTTTATTCAGATACAGATTGGTCT
GAAATCTTCAAGTATATATATAGCCTTACAGCGTGACACGTTGATGATGTGCCCCGTGCT
GTTAACATTGTAATTTTTTTTATAAAAAAGAAAATCTT

consensusID : consensus_10293#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 816
fasta sequence

                              [ACAATTTGTGCAATATGTATGAGGGGTGGACACCTTGGATATGATTCAAAGATACATGTGAACATGTCTTTCTACGATTTGTTTTTTCCAGGGCAAGCTGAAGTTGAGATCTGAATGGGCATAAGTTATTACAATATCCACCTTTTATTTGCCTAGTTAAGTTATACTAGTCAACTTTCTGCCAACCATTTTCC-TGGATCACTGTC-AATAGTCTGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGC-TTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATC-TGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAA-GAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAA-GACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGTAATTCTAAAGTGGGCAAGTATCCCAGTAAAAACTAAAAAGA]

[-] EMBL CB660264             [ACAATTTGTGCAATATGTATGAGGGGTGGACACCTTGGATATGATTCAAAGATACATGTGAACATGTCTTTCTACGATTTGTTTTTTCCAGGGCAAGCTGAAGTTGAGATCTGAATGGGCATAAGTTATTACAATATCCACCTTTTATTTGCCTAGTTAAGTTATACTAGTCAACTTTCTGCCAACCATTTTCC TGGATCACTGTC AATAGTCTGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAG         AGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATC TGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAA GAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAA GACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTTTAATGGTAAAGTGGGCAAG                       ]
[-] EMBL CB666952             [   ATTTGTGCAATATGTATGAGGGGTGGACACCTTGGATATGATTCAAAGATACATGTGAACATGTCTTTCTACGATTTGTTTTTTTCAGGGCAAGCTGAAGTTGAGATCTGAATGGGCATAAGTTATTACAATATCCACCTTTTATTTGCCTA       TATACTAGTCAACTTTCTGCCAACCATTTTCC TGGATCACTGTC AATAGTCTGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGC TTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATC TGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAA GAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAA GACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGTAATTCTAAAGTGGGCAAGTATCCCAGTAAAAACTAAAAAGA]
[+] EMBL AU100895             [                                                                                                                                                                                               TCCGTGGATCACTGTCAAATAGTCTGAGTTTGACCAAGNCAATCCATAGTGAAACCAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATCTTGAAGTACTTTCAGCGTTTTCATG ACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAA GAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAA GACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTCTAATTCTAAAGTGGGCAAaaaa                    ]
[+] EMBL C27890               [                                                                                                                                                                                                             TC AATAGTCTGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGC TTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATC TGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAANGAGTTTTCAGTTCACGTGGACAGCCATGGCTTTTCACTNCCAGTGGACTTAAGGACTTCATGATCTTTAACAGTAAGCCGTCTTAAGACCATGAAGAG TTTAGCAAGCACG                                                                                                                                                                                            ]




>consensus_10293#1
ACAATTTGTGCAATATGTATGAGGGGTGGACACCTTGGATATGATTCAAAGATACATGTG
AACATGTCTTTCTACGATTTGTTTTTTCCAGGGCAAGCTGAAGTTGAGATCTGAATGGGC
ATAAGTTATTACAATATCCACCTTTTATTTGCCTAGTTAAGTTATACTAGTCAACTTTCT
GCCAACCATTTTCCTGGATCACTGTCAATAGTCTGAGTTTGGACAAGACAATCCATAGTG
AAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTAC
AGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCT
ATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACAATGT
TCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTG
GTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGGACAG
CCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCGTCTT
AAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGA
GTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCA
TGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGTAATTC
TAAAGTGGGCAAGTATCCCAGTAAAAACTAAAAAGA

consensusID : consensus_10293#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 693
fasta sequence

                              [GTAATGACCATTTGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAGCATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGTAATTCTAAAGTGGGCAAGTATCACAGTAAAAAAAAAGA]

[-] EMBL CB649164             [GTAATGACCATTTGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAGCATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCATAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACAATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGGACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCGTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGTAATTCTAAAGTGGGCAAGTATCACAGTAAAAAAAAAGA]




>consensus_10293#2
GTAATGACCATTTGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAGCATAA
GTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCATAGTG
AAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGCTTTAC
AGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGGTAGCT
ATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTACAATGT
TCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATGGACTG
GTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTGGACAG
CCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCCGTCTT
AAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGGTTCGA
GTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCATGACCA
TGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGTAATTC
TAAAGTGGGCAAGTATCACAGTAAAAAAAAAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10293#0      GCCAACCATTTTCCTGGATCACTGTCAATAGTCTGGTACGTCTCCCCACGTTTATACATA 60
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TTACTGCTTTCCCTGCTTTGGGACTTTTTTTTTTAATTCGACATTATTGATTTTAAGTTT 120
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TTGTGATATAACTTTGATCGCTACTTTTATATACTTATAACAATACTCTCTCTTTTACTT 180
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      GACATTTTGACTTCTCGTAGTCACCACTCACCAATATACAGCTGTAATCATTCTCTTTTG 240
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      CAATTTTTAATTTTTAATGTATATATTTCATACATCTATTCTGTACATTTTTTGCTATCT 300
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TGATGATCAACATTTGGAAAGTTTGATGGCATGTATTCTATTCTAGGTGACAAGTAAAAA 360
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      GGAACAGATGGAGTAAGTACTTTTAGAAAAATCTAGTAGAGTAGTTTCCATATTATCCAA 420
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TATGGGTATTATAGTTTCCATTAATACCACCTCCATTTTTAAACATATGACACTGTTGGC 480
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TTTTGGACATACGACCATCCATCTTATCAAAAGGATATGTATCACTTATTTTTTTGTGAC 540
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TTGTTTTTATCATTAAAGATACTTTAAGCATGACTACATTTTTGCATAAAATTTTTTAAT 600
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      AAGACAAATGGTCAAATGTATGTCCAAAAATCAATAGCTTCGTATATTTAAAAATGGAGA 660
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      GTATTAATGGTCAAGTTTTTACTACATGGACATGAAATTTTAAAAAAAAAGGAAGGAAAT 720
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      GCTCATTTTGTTTGTTTTTTTACACGTGCATATGTGGATACATGCACTATCACCAACGTA 780
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      ATGATGCACGTTTAAATTCAAATCTTCTGTTCATTATCATGTCGTGCACAAATCATGAAG 840
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      -----------------------------------------------ACAATTTGTGCAA 13
                                                                                   

consensus_10293#0      CACGTTGGACTGATAGGATAGTGCATATGCAGAGATTCATTTCTCTTTCACATAACTATA 900
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      TATGTATGAGGGGT-GGACACCTTGGATAT---GATTCAA---------AGATACATGTG 60
                                                                                   

consensus_10293#0      ACCTTCTGTTAATACAAATCAGTTTATTCCTTTTAATATTTTCGTTTTTTTTTTGTTGCA 960
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      AACATGTCTTTCTACGA-TTTGTTTTTTCCAGGGCAAGCTGAAGTTGAGATCTGAATG-- 117
                                                                                   

consensus_10293#0      AGCTTTAATGACCATT-TGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAG 1019
consensus_10293#2      ----GTAATGACCATT-TGTCGATCTTCATTTTCTAACGTACTTAGAAGTAACAGTAAAG 55
consensus_10293#1      GGCATAAGTTATTACAATATCCACCTT--TTATTTGCCTAGTTAAGTTATACTAGTCAAC 175
                             * * *  *   * ** * ***  ** * *  *    * **   **  *** ** 

consensus_10293#0      CATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCA 1079
consensus_10293#2      CATAAGTGATTTACCCAAAAAATTTCTGTTTCATTTCCAGAGTTTGGACAAGACAATCCA 115
consensus_10293#1      TTTCTGCCAACCATTTTCCTGGATCACTGTCAATAGTCTGAGTTTGGACAAGACAATCCA 235
                         *  *  *   *          *     *  **   * *********************

consensus_10293#0      TAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGC 1139
consensus_10293#2      TAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGC 175
consensus_10293#1      TAGTGAAAACAAGATTGCCACAGCACGTCGAGCAAAAGCAGGCTTACTGCCACAAAGAGC 295
                       ************************************************************

consensus_10293#0      TTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGG 1199
consensus_10293#2      TTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGG 235
consensus_10293#1      TTTACAGGGTCACCATTCACTCCATATCCTAGCAGCAAGATATGAACTGTTAAGTATGGG 355
                       ************************************************************

consensus_10293#0      TAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTAC 1259
consensus_10293#2      TAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTAC 295
consensus_10293#1      TAGCTATGGATGGATCCAGACACAGCAAGGATCTGAAGTACTTTCAGCGTTTTCATGTAC 415
                       ************************************************************

consensus_10293#0      AATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATG 1319
consensus_10293#2      AATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATG 355
consensus_10293#1      AATGTTCTCAGCTATACAGCAATGTATTGCAGAATTCAGGCATCGATATTTTGGGATATG 475
                       ************************************************************

consensus_10293#0      GACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTG 1379
consensus_10293#2      GACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTG 415
consensus_10293#1      GACTGGTTTTAGCAATGGTATGAACAAAAATACCCTAGCTAAGAGTTTGCAGTTCACGTG 535
                       ************************************************************

consensus_10293#0      GACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCC 1439
consensus_10293#2      GACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCC 475
consensus_10293#1      GACAGCCATGGCTTTGCACTCCCAGTGGACTGAAGACTTCATGATCTTTAACAGTAAGCC 595
                       ************************************************************

consensus_10293#0      GTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGG 1499
consensus_10293#2      GTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGG 535
consensus_10293#1      GTCTTAAGAACATGAAGAGTTTTAGCAAGCACGTTTTAAAAGCACAACCAAGAAATCTGG 655
                       ************************************************************

consensus_10293#0      TTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCAT 1559
consensus_10293#2      TTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCAT 595
consensus_10293#1      TTCGAGTATAGTGTACATAATATTTTGCATGTACTTGTGATTTTAGAAGATTCCTACCAT 715
                       ************************************************************

consensus_10293#0      GACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTCT 1619
consensus_10293#2      GACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGT 655
consensus_10293#1      GACCATGTTGCATTGATGTAAAGATAGGTGTTCGACATGCAATTCTGGAAGTGGGATTGT 775
                       ********************************************************** *

consensus_10293#0      AGTTCTAAAGTGGGCAAGTATCACAGTATTTTTTTCCTCTATGCACACCTCAAATATAGC 1679
consensus_10293#2      AATTCTAAAGTGGGCAAGTATCACAGTAAAAAAAAAGA---------------------- 693
consensus_10293#1      AATTCTAAAGTGGGCAAGTATCCCAGTAAAAACTAAAAAGA------------------- 816
                       * ******************** *****                                

consensus_10293#0      TATATTTTCGCGTGAAAAAGGGTCTGGCGATATTCAAAAGCAAAATTGGAAATTTATAGC 1739
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TTGTAGAATACATGAACTCTTGCTTTCTTTCCTTGTGTTTTATTCAGATACAGATTGGTC 1799
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TGAAATCTTCAAGTATATATATAGCCTTACAGCGTGACACGTTGATGATGTGCCCCGTGC 1859
consensus_10293#2      ------------------------------------------------------------
consensus_10293#1      ------------------------------------------------------------
                                                                                   

consensus_10293#0      TGTTAACATTGTAATTTTTTTTATAAAAAAGAAAATCTT 1898
consensus_10293#2      ---------------------------------------
consensus_10293#1      ---------------------------------------