cluster # 10342

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Oryza sativa
cluster # 10342 cluster # 10342 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10342#0 length = 1126 sequences # 3

consensus_10342#1 length = 635 sequences # 1
consensus_10342#2 length = 398 sequences # 3

consensusID : consensus_10342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1126
fasta sequence

                              [CACAGCCATCGTCTCTCTCGAGCCGTCGCTGAAGCCAAAAAACCGAGCGAGCTGCGCTACTAGGCAATACACGCAGTTTCCGGCGATGTCGGCGGCGGCGGCGGCTACTGATGGGACGTACTCTCCGGCGGCGGCCGCGGGGGAAAAGCGGAGGGAGAGGAAGGAGGAGCTGCGGCGCCACCTCGCCGAGGACGCCGACTGGCCCCGCGCCGACGGCCGCTCCTTCCACGACTGCCGTCCCGCATTTATGCAAACAGGACCAACAACTGCCGCATCAGGATCTGCTTATGCAGAATTTGGGAAGACAAAGGTCATTGTGTCAGTGTTTGGACCAAGAGAAAGCAAGAAAGCAATGTTGTACAGTGATACCGGTAGACTCAATTGCAATGTGAGCTACACAACATTTGCCACCCCTATACGTGGACAGGGAATGGACAACAAGGAGTACTCCGCAATGCTCCATAAAGCCCTGGAAGGCGCAGTGATGCTACACACTTTTCCAAAAACCACTGTTGATGTCTTTGCGTTGGTTCTTGAGTCTGGTGGCAGTGATCTTCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCGGAATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTATCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACATGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAATCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGGAGCGCTTGAAAGATGCTGCCAGCTTGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTCCAAGACTTAAAACATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGGCCTGATGTTTGCGAGATTACATGATTATGCTGATTGTTTACTTCATGGCAAAGCAGCTAATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGTACTCCTGACCTTCAGACTTGTAAACATTGGGATGATGCATTGACGCGGCACTCCTGTCGTTATTCGT]

[+] EMBL CF329059             [CACAGCCATCGTCTCTCTCGAGCCGTCGCTGAAGCCAAAAAACCGAGCGAGCTGCGCTACTAGGCAATACACGCAGTTTCCGGCGATGTCGGCGGCGGCGGCGGCTACTGATGGGACGTACTCTCCGGCGGCGGCCGCGGGGGAAAAGCGGAGGGAGAGGAAGGAGGAGCTGCGGCGCCACCTCGCCGAGGACGCCGACTGGCCCCGCGCCGACGGCCGCTCCTTCCACGACTGCCGTCCCGCATTTATGCAAACAGGACCAACAACTGCCGCATCAGGATCTGCTTATGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK063695             [                                             AGCGAGCTGCGCTACTAGGCAATACACGCAGTTTCCGGCGATGTCGGCGGCGGCGGCGGCTACTGATGGGACGTACTCTCCGGCGGCGGCCGCGGGGGAAAAGCGGAGGGAGAGGAAGGAGGAGCTGCGGCGCCACCTCGCCGAGGACGCCGACTGGCCCCGCGCCGACGGCCGCTCCTTCCACGACTGCCGTCCCGCATTTATGCAAACAGGACCAACAACTGCCGCATCAGGATCTGCTTATGCAGAATTTGGGAAGACAAAGGTCATTGTGTCAGTGTTTGGACCAAGAGAAAGCAAGAAAGCAATGTTGTACAGTGATACCGGTAGACTCAATTGCAATGTGAGCTACACAACATTTGCCACCCCTATACGTGGACAGGGAATGGACAACAAGGAGTACTCCGCAATGCTCCATAAAGCCCTGGAAGGCGCAGTGATGCTACACACTTTTCCAAAAACCACTGTTGATGTCTTTGCGTTGGTTCTTGAGTCTGGTGGCAGTGATCTTCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCGGAATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTATCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACATGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAATCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGGAGCGCTTGAAAGATGCTGCCAGCTTGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTCCAAGACTTAAAACATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGGCCTGATGTTTGCGAGATTACATGATTATGCTGATTGTTTACTTCATGGCAAAGCAGCTAATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGTACTCCTGACCTTCAGACTTGTAAACATTGGGATGATGCATTGACGCGGCACTCCTGTCGTTATTCGT]
[+] EMBL CF322956             [                                                                                                                                                                                                                                                                                                                                                                                                              CAACATTTGCCACTCCTATACGTGGGCAGGGAACAGATAACAAGGAGTACTCCGCAATGCTTCATAAAGCTCTGGAAGGCGCAGTGATGTTGCACACTTTTCCAAAGACCACTGTTGATGTTTTTGCCTTGGTTCTTGAGTCTGGTGGCAGTGATCTTCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCTGGAATCATGATGTATGACCTTGTTACATCAGTATCTGTGTCCTGTTTTGGGAAGAACATAATCATTGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCCTTATGGTGGCGTACATGCCAGCCCGCAAAGAGATCACGCAGCTAACTCTTACTGGAGAGTGGTCTGATGGCAAAATCACGAACGCGGTGGAGCTCTGCATGGATGCCTGCAGTAAGCTCTGTGACATACTTCGGGAGCGCTTGAAAGATGCTTCCAGCTTGGCTGAG                                                                                                                                                                                                                                                               ]




>consensus_10342#0
CACAGCCATCGTCTCTCTCGAGCCGTCGCTGAAGCCAAAAAACCGAGCGAGCTGCGCTAC
TAGGCAATACACGCAGTTTCCGGCGATGTCGGCGGCGGCGGCGGCTACTGATGGGACGTA
CTCTCCGGCGGCGGCCGCGGGGGAAAAGCGGAGGGAGAGGAAGGAGGAGCTGCGGCGCCA
CCTCGCCGAGGACGCCGACTGGCCCCGCGCCGACGGCCGCTCCTTCCACGACTGCCGTCC
CGCATTTATGCAAACAGGACCAACAACTGCCGCATCAGGATCTGCTTATGCAGAATTTGG
GAAGACAAAGGTCATTGTGTCAGTGTTTGGACCAAGAGAAAGCAAGAAAGCAATGTTGTA
CAGTGATACCGGTAGACTCAATTGCAATGTGAGCTACACAACATTTGCCACCCCTATACG
TGGACAGGGAATGGACAACAAGGAGTACTCCGCAATGCTCCATAAAGCCCTGGAAGGCGC
AGTGATGCTACACACTTTTCCAAAAACCACTGTTGATGTCTTTGCGTTGGTTCTTGAGTC
TGGTGGCAGTGATCTTCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCGG
AATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTAT
CATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACAT
GCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAAT
CACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGGA
GCGCTTGAAAGATGCTGCCAGCTTGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTCC
AAGACTTAAAACATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGGCC
TGATGTTTGCGAGATTACATGATTATGCTGATTGTTTACTTCATGGCAAAGCAGCTAATT
GTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGTACTCCTGACCTTCAGACTTGT
AAACATTGGGATGATGCATTGACGCGGCACTCCTGTCGTTATTCGT

consensusID : consensus_10342#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 635
fasta sequence

                              [CTTTGCGTTGGTTCTTGAGTCTGGTGGCAGTGATCTTCCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCGGAATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTATCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACATGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAATCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGGAGCGCTTGAAAGATGCTGCCAGCTGGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTCCAAGACTTAAAGCATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGGCCTGATGTTTGCGAGATTACATGATTATGCTGATTGTTTACTTCATGGCAAAGCAGCTAATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGCACTCCTGACCTTCAGACTTGTAAACATTGGGATGATGCATTGACGCGGCAAAAAAAAAAAAAAAAAAAAAGAACACTGTCATGCCGTTCGTAGC]

[-] EMBL CF329060             [CTTTGCGTTGGTTCTTGAGTCTGGTGGCAGTGATCTTCCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCGGAATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTATCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACATGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAATCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGGAGCGCTTGAAAGATGCTGCCAGCTGGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTCCAAGACTTAAAGCATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGGCCTGATGTTTGCGAGATTACATGATTATGCTGATTGTTTACTTCATGGCAAAGCAGCTAATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGCACTCCTGACCTTCAGACTTGTAAACATTGGGATGATGCATTGACGCGGCAAAAAAAAAAAAAAAAAAAAAGAACACTGTCATGCCGTTCGTAGC]




>consensus_10342#1
CTTTGCGTTGGTTCTTGAGTCTGGTGGCAGTGATCTTCCCCATCATTATTTCTTGTGCTA
GTCTTGCGTTGGCTGATGCCGGAATCATGATATATGACCTTGTTACATCGGTATCTGTGT
CCTGTTTCGGGAAGAACATTATCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACG
GCAGCATTATGGTGGCGTACATGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTG
GAGAGTGGTCTGATGGCAAAATCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTA
AGCTCTGTGACATACTACGGGAGCGCTTGAAAGATGCTGCCAGCTGGGCTGAGTGAATAA
TTGCTTTAGCAGCGAGATGTCCAAGACTTAAAGCATATCCTTAGCTGTACAAATTTTGTA
GGCAAGGGAGGAGGCTAAGGCCTGATGTTTGCGAGATTACATGATTATGCTGATTGTTTA
CTTCATGGCAAAGCAGCTAATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTG
CACTCCTGACCTTCAGACTTGTAAACATTGGGATGATGCATTGACGCGGCAAAAAAAAAA
AAAAAAAAAAAGAACACTGTCATGCCGTTCGTAGC

consensusID : consensus_10342#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 398
fasta sequence

                              [CAAGGAGATCACGCAGCTAACTCTTACTGGAGAGTGGTCTGATGGCAAAATCACGAACGCGGTGGAGCTCTGCATGGATGCCTGCAGTAAGCTCTGTGACATACTTCGGGAGCACTTGAAAGATGCTTCCAGCTTGGCTGAGTGAATAAAGTTTTAGCAGCAGGATGTTGCAAGCTCAAACAGATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGCTGATGCCTGATGTTTGCGGGACTACATGATTATATGCTGATTGTTTCCTTTGCAAAACAGCTAATTGTTCAGAGAGAAAGTAGCATTGTCTGTATGTTGTTTTGTACTACTCCTGATTGTAATACTTTATAGATGAAGCCATAAAAGAATGCAAAATTAGCTTAAAAAAAAAAAAAA]

[+] EMBL BE607457             [CAAGGAGATCACGCAGCTAACTCTTACTGGAGAGTGGTCTGATGGCAAAATCACGAACGCGGTGGAGCTCTGCATGGATGCCTGCAGTAAGCTCTGTGACATACTTCGGGAGCACTTGAAAGATGCTTCCAGCTTGGCTGAGTGAATAAAGTTTTAGCAGCAGGATGTTGCAAGCTCAAACAGATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGCTGATGCCTGATGTTTGCGGGACTACATGATTATATGCTGATTGTTTCCTTTGCAAAACAGCTAATTGTTCAGAGAGAAAGTAGCATTGTCTGTATGTTGTTTTGTACTACTCCTGATGGTAATACTTTATAGATGAAGCCATAAAAGAATGCAAAATTA                  ]
[+] EMBL CF331619             [                                                                                                          gagtAGAAATTGAAAGATGCTTCCAGCTTGGCTGAGTGAATAAAGTTTTAGCAGCAGGATGTTGCAAGCTCAAACAGATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGCTGATGCCTGATGTTTGCGGGACTACATGATTATATGCTGATTGTTTCCTTTGCAAAACAGCTAATTGTTCAGATAGAAAGTAGCATTGTCTGTATGTTGTTTTGTACTACTCCTGATTGTAATACTTTATAGATGAAGCCATAAAAGAATGCAAAATTAGCTTAAAAAAAAAAAAA ]
[-] EMBL CF331618             [                                                                                                                            GCTTCCAGCTTGGCTGAGTGAATAAAGTTTTAGCAGCAGGATGTTGCAAGCTCAAACAGATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGCTGATGCCTGATGTTTGCGGGACTACATGATTATATGCTGATTGTTTCCTTTGCAAAACAGCTAATTGTTCAGAGAGAAAGTAGCATTGTCTGTATGTTGTTTTGTACTACTCCTGATTGTAATACTTTATAGATGAAGCCATAAAAGAATGCAAAATTAGCTTAAAAAAAAAAAAAA]




>consensus_10342#2
CAAGGAGATCACGCAGCTAACTCTTACTGGAGAGTGGTCTGATGGCAAAATCACGAACGC
GGTGGAGCTCTGCATGGATGCCTGCAGTAAGCTCTGTGACATACTTCGGGAGCACTTGAA
AGATGCTTCCAGCTTGGCTGAGTGAATAAAGTTTTAGCAGCAGGATGTTGCAAGCTCAAA
CAGATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGCTGATGCCTGATGTTTGCGG
GACTACATGATTATATGCTGATTGTTTCCTTTGCAAAACAGCTAATTGTTCAGAGAGAAA
GTAGCATTGTCTGTATGTTGTTTTGTACTACTCCTGATTGTAATACTTTATAGATGAAGC
CATAAAAGAATGCAAAATTAGCTTAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10342#0      CACAGCCATCGTCTCTCTCGAGCCGTCGCTGAAGCCAAAAAACCGAGCGAGCTGCGCTAC 60
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      TAGGCAATACACGCAGTTTCCGGCGATGTCGGCGGCGGCGGCGGCTACTGATGGGACGTA 120
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      CTCTCCGGCGGCGGCCGCGGGGGAAAAGCGGAGGGAGAGGAAGGAGGAGCTGCGGCGCCA 180
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      CCTCGCCGAGGACGCCGACTGGCCCCGCGCCGACGGCCGCTCCTTCCACGACTGCCGTCC 240
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      CGCATTTATGCAAACAGGACCAACAACTGCCGCATCAGGATCTGCTTATGCAGAATTTGG 300
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      GAAGACAAAGGTCATTGTGTCAGTGTTTGGACCAAGAGAAAGCAAGAAAGCAATGTTGTA 360
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      CAGTGATACCGGTAGACTCAATTGCAATGTGAGCTACACAACATTTGCCACCCCTATACG 420
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      TGGACAGGGAATGGACAACAAGGAGTACTCCGCAATGCTCCATAAAGCCCTGGAAGGCGC 480
consensus_10342#1      ------------------------------------------------------------
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      AGTGATGCTACACACTTTTCCAAAAACCACTGTTGATGTCTTTGCGTTGGTTCTTGAGTC 540
consensus_10342#1      ---------------------------------------CTTTGCGTTGGTTCTTGAGTC 21
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      TGGTGGCAGTGATCTTCCC-ATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCG 599
consensus_10342#1      TGGTGGCAGTGATCTTCCCCATCATTATTTCTTGTGCTAGTCTTGCGTTGGCTGATGCCG 81
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      GAATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTA 659
consensus_10342#1      GAATCATGATATATGACCTTGTTACATCGGTATCTGTGTCCTGTTTCGGGAAGAACATTA 141
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      TCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACA 719
consensus_10342#1      TCATCGATCCAACCTCTGACGAGGAAGCATGGCAAGACGGCAGCATTATGGTGGCGTACA 201
consensus_10342#2      ------------------------------------------------------------
                                                                                   

consensus_10342#0      TGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAA 779
consensus_10342#1      TGCCAGCCCGCAAGGAGATCACTCAGCTAACACTTACTGGAGAGTGGTCTGATGGCAAAA 261
consensus_10342#2      ----------CAAGGAGATCACGCAGCTAACTCTTACTGGAGAGTGGTCTGATGGCAAAA 50
                                 ************ ******** ****************************

consensus_10342#0      TCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGG 839
consensus_10342#1      TCACCAATGCGGTAGAGCTCTGCATGGATGCTTGTAGTAAGCTCTGTGACATACTACGGG 321
consensus_10342#2      TCACGAACGCGGTGGAGCTCTGCATGGATGCCTGCAGTAAGCTCTGTGACATACTTCGGG 110
                       **** ** ***** ***************** ** ******************** ****

consensus_10342#0      AGCGCTTGAAAGATGCTGCCAGCTTGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTC 899
consensus_10342#1      AGCGCTTGAAAGATGCTGCCAGCTGGGCTGAGTGAATAATTGCTTTAGCAGCGAGATGTC 381
consensus_10342#2      AGCACTTGAAAGATGCTTCCAGCTTGGCTGAGTGAATAAA-GTTTTAGCAGCAGGATGTT 169
                       *** ************* ****** **************  * *********  ***** 

consensus_10342#0      CAAGACTTAAA-ACATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGG 958
consensus_10342#1      CAAGACTTAAA-GCATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGGAGGCTAAGG 440
consensus_10342#2      GCAAGCTCAAACAGATATCCTTAGCTGTACAAATTTTGTAGGCAAGGGAGG---CTGATG 226
                         *  ** ***   *************************************   ** * *

consensus_10342#0      CCTGATGTTTGCGAGATTACATGATTAT--GCTGATTGTTTACTTCATGGCAAAGCAGCT 1016
consensus_10342#1      CCTGATGTTTGCGAGATTACATGATTAT--GCTGATTGTTTACTTCATGGCAAAGCAGCT 498
consensus_10342#2      CCTGATGTTTGCGGGACTACATGATTATATGCTGATTGTTTCCTTT---GCAAAACAGCT 283
                       ************* ** ***********  *********** ***    ***** *****

consensus_10342#0      AATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGTACT---CCTGACCTTCA 1073
consensus_10342#1      AATTGTTCTGAGAGAAAGTAGCATGGTTTGTATATTGTTTTGCACT---CCTGACCTTCA 555
consensus_10342#2      AATTGTTCAGAGAGAAAGTAGCATTGTCTGTATGTTGTTTTGTACTACTCCTGATTGTAA 343
                       ******** *************** ** ***** ******** ***   *****   * *

consensus_10342#0      GACTTGTAAACATTGGGATGATGCATTGACGCGGCACTCCTGTCGTTATTCGT------- 1126
consensus_10342#1      GACTTGTAAACATTGGGATGATGCATTGACGCGGCAAAAAAAAAAAAAAAAAAAAAGAAC 615
consensus_10342#2      TACTT-TATAGAT-GAAGCCATAAAAGAATGCAAAATTAGCTTAAAAAAAAAAAAAA--- 398
                        **** ** * ** *     **  *   * **   *           *            

consensus_10342#0      --------------------
consensus_10342#1      ACTGTCATGCCGTTCGTAGC 635
consensus_10342#2      --------------------