These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10349#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2427 fasta sequence [CCACTCGCTAGTCCAATCTCGGTCTCTCCCCGCAGCGACGCGAAGGGGAGCAAGGGCAAGAAGCGGAAGCACAAGGACGGGGAGGGGGAGAAGGAGCACGGGAAGAGGTCCAAGGAGAGGAAGGGGGAGGGCGAGGCGGCGGAGGCGAGGCGCGGGGACGACAAGGTGAGGCGGGCGATGGAGGACGAGAGGTTCGCGGCGGCGCGGACCGACCCGAGGTTCCGGGCGATGCGGCGGAAGGAGGCGAAGGTGGAGCTCGACTCGAGGTTCACCAGCATGCTGACGGACCCGAGGTTCTCGTCGTCGTCGGCGCCGGTGGACAAGCACGGCAGGAGGCGCCGCAAGAAGGGTGGCAGGGAGAACCCGATGCTGCAGTACTATCTCAACCAGGAGGAAGAGGAGGAAAAGGAGAAGGCCAAGTTGGTTGAAGAAGAGGAAGAAGAGGGGGACGCAGAAGAGCAGCAAGGGGAAGAAGAGAGCTCCAGTAGCGACGACGACGACGACGATGAGGACGAAGAAGAGGACGATGACGACGAGTACTCTGTCGGCAGTGACATTGCGCATTATTTGATGGGCAGGCATGATGATACACCTATGATTGACAAGGAAACCCATAGGCTTGCTGTTGTTAATATGGACTGGGATCATATTAAGGCAGTTGACCTGTATATGGTGATGACATCTTGCCTCCCAAAAGGTGGGCGAGTCTTATCAGTGTCAGTCTATCCATCAGAATTTGGACTTGAGCGCATGAAAATTGAGTCAACTAAGGGCCCAGCTGCCCTTGTTGATGTCAATGGTAGTGATGGTGAATATAGTGGTGGTGATGATGATGACGACGATGAAGAAGAAGAAGATAGTAGTGACACTGAACATGATTCTGAGGCTGAAAACAACAAGCTACGTACTTATGAGCTAAACAGACTGAGGTATTACTATGCAGTTGTGGTGTGTGATTCCAGTGCAACTGCAAATCACCTGTACATGAATCTTGATGGTACAGAATTATTGAAAACATCAAATGTGTTCGACTTGCAGTTTATTCCTGACTCTATGGAATTTAAACATCCTGCTCGTGATGTTGCTACAGAGGCACCTCCAAGTTACAAGGAGCCTAATTTTGAAACTCGTGCTTTGCAACATAGCAAGGTTAAGCTCACGTGGGACGATGATGAACCAGAACGCAAAAAGGTCTTGAGGCGAAAGTTCACTGATGATCAGTTAGATGATCTTGATATGTACTTAGCAAGTGATGACAGTGCATCAGACGATGAAGGTGCAGATAATCATGGTGACGAGTCTCTACAAAGTGGAGCCAAAAGAAAGTTAACAAGGGAGGAGAGGTTGGCTCTTCTACTACAAGGTGACAAATCCGAGGAGGAACAAACTGATGGCGAGGACATGGAGATAACATTCAACACAGAGCTTGAGGACCTTAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAAACGTAAATCTAGGAAGAGAAGGTCAAAGGATGATGATGATGATGGCTATAGCAGCGAAGATGGCCTGGATGAACATGACGATTTCTTTGATGATGAAATGTCTGATGAAGAAATTAAGCCAAACAAGAAGCAGAAGGCAAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACCCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA-AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTTTGTTATCCTTAATATTTTCGAATATAGTTCTATTATTTTCAGGCTATAAAATTAAATTATGATGGTGGCTTTGTACCA] [+] EMBL AK071504 [CCACTCGCTAGTCCAATCTCGGTCTCTCCCCGCAGCGACGCGAAGGGGAGCAAGGGCAAGAAGCGGAAGCACAAGGACGGGGAGGGGGAGAAGGAGCACGGGAAGAGGTCCAAGGAGAGGAAGGGGGAGGGCGAGGCGGCGGAGGCGAGGCGCGGGGACGACAAGGTGAGGCGGGCGATGGAGGACGAGAGGTTCGCGGCGGCGCGGACCGACCCGAGGTTCCGGGCGATGCGGCGGAAGGAGGCGAAGGTGGAGCTCGACTCGAGGTTCACCAGCATGCTGACGGACCCGAGGTTCTCGTCGTCGTCGGCGCCGGTGGACAAGCACGGCAGGAGGCGCCGCAAGAAGGGTGGCAGGGAGAACCCGATGCTGCAGTACTATCTCAACCAGGAGGAAGAGGAGGAAAAGGAGAAGGCCAAGTTGGTTGAAGAAGAGGAAGAAGAGGGGGACGCAGAAGAGCAGCAAGGGGAAGAAGAGAGCTCCAGTAGCGACGACGACGACGACGATGAGGACGAAGAAGAGGACGATGACGACGAGTACTCTGTCGGCAGTGACATTGCGCATTATTTGATGGGCAGGCATGATGATACACCTATGATTGACAAGGAAACCCATAGGCTTGCTGTTGTTAATATGGACTGGGATCATATTAAGGCAGTTGACCTGTATATGGTGATGACATCTTGCCTCCCAAAAGGTGGGCGAGTCTTATCAGTGTCAGTCTATCCATCAGAATTTGGACTTGAGCGCATGAAAATTGAGTCAACTAAGGGCCCAGCTGCCCTTGTTGATGTCAATGGTAGTGATGGTGAATATAGTGGTGGTGATGATGATGACGACGATGAAGAAGAAGAAGATAGTAGTGACACTGAACATGATTCTGAGGCTGAAAACAACAAGCTACGTACTTATGAGCTAAACAGACTGAGGTATTACTATGCAGTTGTGGTGTGTGATTCCAGTGCAACTGCAAATCACCTGTACATGAATCTTGATGGTACAGAATTATTGAAAACATCAAATGTGTTCGACTTGCAGTTTATTCCTGACTCTATGGAATTTAAACATCCTGCTCGTGATGTTGCTACAGAGGCACCTCCAAGTTACAAGGAGCCTAATTTTGAAACTCGTGCTTTGCAACATAGCAAGGTTAAGCTCACGTGGGACGATGATGAACCAGAACGCAAAAAGGTCTTGAGGCGAAAGTTCACTGATGATCAGTTAGATGATCTTGATATGTACTTAGCAAGTGATGACAGTGCATCAGACGATGAAGGTGCAGATAATCATGGTGACGAGTCTCTACAAAGTGGAGCCAAAAGAAAGTTAACAAGGGAGGAGAGGTTGGCTCTTCTACTACAAGGTGACAAATCCGAGGAGGAACAAACTGATGGCGAGGACATGGAGATAACATTCAACACAGAGCTTGAGGACCTTAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAAACGTAAATCTAGGAAGAGAAGGTCAAAGGATGATGATGATGATGGCTATAGCAGCGAAGATGGCCTGGATGAACATGACGATTTCTTTGATGATGAAATGTCTGATGAAGAAATTAAGCCAAACAAGAAGCAGAAGGCAAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACTCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAAGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTTTGTTATCCTTAATATTTTCGAATATAGTTCTATTATTTTCAGGCTATAAAATTAAATTATGATGGTGGCTTTGTACCA] [+] EMBL CF323006 [ AACATCCTGCTCGTGATGTTGCTACAGAGGCACCTCCAAGTTACAAGGAGCCTAATTTTGAAACTCGTGCTTTGCAACATAGCAAGGTTAAGCTCACGTGGGACGATGATGAACCAGAACGCAAAAAGGTCTTGAGGCGAAAGTTCACTGATGATCAGTTAGATGATCTTGATATGTACTTAGCAAGTGATGACAGTGCATCAGACGATGAAGGTGCAGACAATCACGGTGACGAGTCTCTACAAAGTGGAGCCAAAAAAAAGTTAACAAGGGAGGAGAGGTTGGCTCTTCTACTACAAGGTGACAAATCCGAGGAGGAACAAACTGATGGCGAGGATATGGAGATAACATTCAACACAGAGCTTGAGGACCTCAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAA ] [+] EMBL CB680081 [ AGAGCTTGAGGACCTTAGCAAGCGTATACTTGACAGAAAGGTCAACAATGAGAAGACTGTCTGGGAGAAGCACCAAGAGAAAATGAAAGAGAAACGTAAATCTAGGAAGAGAAGGTCAAAGGATGATGATGATGATGGCTATAGCAGCGAAGATGGCCTGGATGAACATGACGATTTCTTTGATGATGAAATGTCTGATGAAGAAATTAAGCCAAACAAGAAGCAGAAGGCAAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACCCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCATTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAAGCTTTTTTTTTTat ] [-] EMBL CB680082 [ AAAGGCCAAAGATAAAGGAAAGGGGAAAGGAAAGGACAAACCCCCAGAACAACATTTGGAGGATGAAGCAACCAGAGAAGAGTTGGAGCTTTTGGTTGCGGCTGACAAGGATGCAGGCAACGGTGCAAAGGGTTATAACTTGAAGCGCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTGGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGAAACACAT ] [-] EMBL CB629498 [ GCAAAAAGGGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTTGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTT CTTTATGACAATGATCAAGTAGGACAATT ] [+] EMBL CB629497 [ GGTACCACATGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTTGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTT ] [+] EMBL CB629499 [ GGTACGA AGGGCAAGAAGGGTAAAGAGCAATCTGTTGAGGACGAACTTCCCGACATAGATCTTAGCAAAGATGAGAGGTTCTCAGCCATGTTCAATTCTCATTTGTTTGCGGTGGATCCTACTGATCCCCAGTACAAAAGGAGTGCGGCCTTTATGCGCAAGCAAGCTGGGATAAAGGGAGCACATGAACCATCTCTGGGAGGTAGAGGTAGTGGTAGAGGTACATTGCCACCTGATGATGTGCCTACCGATACTCATGACCAGAAACCTGATGGCACATCCACGGAGAAGCTGGAAACAATGTCTGCAGTCAAGTCACTAAAACGGAAGCTTACTGCATTAAAAAACACAAGCAAGAGTGACCGATAGAGAAAAGCTTTGCTTTACCCTGATGACCAATGAACAGGCTTTTTTTTTTTATTTGTCTATGACGAGAGTTATTTTGGCTTTAGAATAGTTTTTAGGTATGTTATTTATGTTTGCTACCTACCTATGAAAATGTGTCAAAATTTGGGTTTTGACAATGATCAAGTAGGACAATTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||