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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10366#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2516 fasta sequence
[TCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGC-TGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTTGGCTTAAA-CGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGCGCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATGAGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAATTTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAAATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATGTCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACCAGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCCGACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGAAGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTCCAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGAACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTGGGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGAGGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACCTGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGATGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGAACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCACACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTGCAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGATCAACCAAGTGGCGCAGGAGGTATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGATCCAGCCAGCATAGCATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTCATATTATAATACTATCTATTATTGCCCACATTCATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAAT-GATAGAAAGTCTTATAATATGAAACGGAGGGAGTA-TTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCACGATATTATATATGAGATTGGATTTTAAACTCTTGAGGGGATGTCTCATCGTTGCTTGTATGTTNAATTGAGAAGATGTATTANCATGTGATATATCTTATTATAAGCATTCAACTTAAAATTT]
[+] EMBL C28510 [TCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAGCATCAGCTATGGNGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGC TGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACAACGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTTCTTGGCTTAAANGGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGGNTTTCCT ]
[+] EMBL AK069041 [ CTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGC TGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTTGGCTTAAA CGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGCGCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATGAGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAATTTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAAATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATGTCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACCAGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCCGACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGAAGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTCCAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGAACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTGGGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGAGGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACCTGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGATGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGAACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCACACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTGCAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGATCAACCAAGTGGCGCAGGAGGTATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGATCCAGCCAGCATAGCATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTCATATTATAATACTATCTATTATTGCCCACATTCATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAAT GATAGAAAGTCTTATAATATGAAACGGAGGGAGTA TTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCACGATATTATATATGAGATTGG ]
[+] EMBL OSS14270A [ TCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTTGCCAAGAGGGGTGACAAGGCCAAGG CGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTTGGCTTAAA CGGCTGTGGAAAGTCCTGTCTNCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTTCACACATGGACATCTATCATGTAACCCATGAGATCGAGGCTT ]
[+] EMBL AU032808 [ GAATGTGGGCAATNGATAGAAAGTCTTATAATATGAAACGGAGGGAGTANCTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAANAGATATCTACATGAAACTGTACCACCCCCACGATATTATATATGAGATTGGATTTTAAACTCTTGAGGGGATGTCTCATCGTTGCTTGTATGTTNAATTGAGAAGATGTATTANCATGTGATATATCTTATTATAAGCATTCAACTTAAAATTT]
consensusID : consensus_10366#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 852 fasta sequence
[CTTCAGGCTGATCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGGTACCACTACTGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACGCTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCACGATATTATATATGAGATTAAA]
[-] EMBL CB629670 [CTTCAGGCTGATCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGGTACCACTACTGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACGCTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCACGATATTATATATGAGATTAAA]
consensusID : consensus_10366#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 769 fasta sequence
[TCTCTCTGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGTAATCTTTATTATTTTTTTCATCAATCAATCAATCCATCATCTGTAAGTAAGTACTAGTACTATAGAGACCATTCATCTCGTCTCTTAGGCGATATGGTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCCGTGATTTCTCTGGCGGTTGGCGCATGANGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTT]
[+] EMBL CB629669 [TCTCTCTGATTTCTCTCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGTAATCTTTATTATTTTTTTCATCAATCAATCAATCCATCATCTGTAAGTAAGTACTAGTACTATAGAGACCATTCATCTCGTCTCTTAGGCGATATGGTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCCGTGATTTCTCTGGCGGTTGGCGCATGANGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTT]
consensusID : consensus_10366#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence
[CGAGGCAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGGTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCTACTACATCTGATGCTATAGCCCATATGCAGATGTACCGTCCTCTTCTTGGGGCCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCCCATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCCCTTGCATGATCCCCTGCCGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCCCTCCATGAAAAGATATTTACATGAAACTGTACCCCCCCCCCGATATTATATATGAGATTGGATTTTAAACTCTCGAGGGGATGTCTCATCGTTGCTTGTATGTTAAATTGAGAAGATGTATTAACATGTGAAAAAAAAAAAAAAAA]
[-] EMBL CA762782 [CGAGGCAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGGTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCTACTACATCTGATGCTATAGCCCATATGCAGATGTACCGTCCTCTTCTTGGGGCCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCCCATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCCCTTGCATGATCCCCTGCCGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCCCTCCATGAAAAGATATTTACATGAAACTGTACCCCCCCCCCGATATTATATATGAGATTGGATTTTAAACTCTCGAGGGGATGTCTCATCGTTGCTTGTATGTTAAATTGAGAAGATGTATTAACATGTGAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCACCAG 60
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 CATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCG 120
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 CTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCG 180
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 CCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACAT 240
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATG 300
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGG 360
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCG 420
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 ACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGG 480
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATG 540
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTG 600
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGC 660
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATG 720
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAAT 780
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAA 840
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 ATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATG 900
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACC 960
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCC 1020
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGA 1080
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTC 1140
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 CAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGA 1200
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 ACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTG 1260
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGA 1320
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACC 1380
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGA 1440
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGA 1500
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 ACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCAC 1560
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 ACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTG 1620
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 -------------------------------------------------CTTCAGGCTGA 11
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 CAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGA 1680
consensus_10366#2 ---------------------------------------------TCTCTCTGATTTCTC 15
consensus_10366#1 TCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAG 71
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 TCAACCAAGTGGCGCAGGAGGTATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAG 1740
consensus_10366#2 TCTGTGCACCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGA 75
consensus_10366#1 GTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTG 131
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 GTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTG 1800
consensus_10366#2 AGGCCGCCGCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGC 135
consensus_10366#1 AGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTG 191
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 AGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTG 1860
consensus_10366#2 GCACCTGCACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTC-- 193
consensus_10366#1 CTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGA 251
consensus_10366#3 -------------------------------------------CGAGGCAACGGGGACGA 17
consensus_10366#0 CTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGA 1920
consensus_10366#2 CCTCTCCCTCACATT-CCACGGCCATGACCTGCTTCTTGACACCGACCTG--GAGCTCAA 250
* * * * *
consensus_10366#1 CGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGAT 311
consensus_10366#3 CGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGGTAAGTTGGATGCTTGTCACGGAT 77
consensus_10366#0 CGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGAT 1980
consensus_10366#2 CTACGGCAG-GTAATCT-TTATTATTTTTTTCATCAATCAATCAATCCATCATC-TGTAA 307
* ** *** * **** ** * * * * ** * * * * * ** * *
consensus_10366#1 GTTTGTACCTGATCTCCATCAACTA--CATCTGATGCTATAGCCCATATGGTACCACTAC 369
consensus_10366#3 GTTTGTACCTGATCTCCATCTACTA--CATCTGATGCTATAGCCCATATG---------- 125
consensus_10366#0 GTTTGTACCTGATCTCCATCAACTA--CATCTGATGCTATAGCCCATATG---------- 2028
consensus_10366#2 GTAAGTACTAGTACTATAGAGACCATTCATCTCGTCTCTTAGGCGATATGGT-------- 359
** **** * ** * ** * ***** * *** * *****
consensus_10366#1 TGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACG 429
consensus_10366#3 ------------------------------------------------------------
consensus_10366#0 ------------------------------------------------------------
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 CTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTT-----CTTGGGGTCTCTG 484
consensus_10366#3 ------------------------CAGATGTACCGTCCTCTT-----CTTGGGGCCTCTG 156
consensus_10366#0 ---------------------------ATGTACCGTCCTCTT-----CTTGGGGTCTCTG 2056
consensus_10366#2 ---TTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGG 416
* ** * *** ** * ** * *
consensus_10366#1 GAGAATGAGGAAACAGCA---AGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGT-- 539
consensus_10366#3 GAGAATGAGGAAACAGCA---AGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGT-- 211
consensus_10366#0 GAGAATGAGGAAACAGCA---AGATCCAGCCAGCATAGCATGTATGTA----TAGTGT-- 2107
consensus_10366#2 GAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCC 476
*** * * ** * ** * * *** ** *** * *
consensus_10366#1 -AATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTA 598
consensus_10366#3 -AATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTA 270
consensus_10366#0 -AATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTCATATTA 2166
consensus_10366#2 GACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCG-AGAA 535
* * *** * ** ** ** * * * * **** * * *
consensus_10366#1 TAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATC 658
consensus_10366#3 TAAGACTATCTAGTATTGCCCCCATTCATATATATATATATGTCTAGATTCATTAGCATC 330
consensus_10366#0 TAATACTATCTATTATTGCCCACATTCATAT------ATATGTCTAGATTCATTAGCATC 2220
consensus_10366#2 GGAGGCTGA--AATCTTGGCCGC-TCAAGATG-ACGGTGGCGGCGAAGCCCTGGACCGCG 591
* ** * * *** ** * * * ** * * * * * *
consensus_10366#1 TATATGAATG-TGGGCAATGATAGAAAGTCTTATAATATGAAACGGAG----GGAGTATT 713
consensus_10366#3 TATATGAATG-TGGGCAATGATAGAAAGTCTTATAATATGAAACGGAG----GGAGTATT 385
consensus_10366#0 TATATGAATG-TGGGCAATGATAGAAAGTCTTATAATATGAAACGGAG----GGAGTATT 2275
consensus_10366#2 TTTATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTT 651
* ****** * * * * ** ** * *** * * *** **
consensus_10366#1 ATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCC 773
consensus_10366#3 ATCTTGGTTTGCCCTTGCATGATCCCCTGCCGTAGTTATTATTATCAGTGACCAAGTTCC 445
consensus_10366#0 ATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCC 2335
consensus_10366#2 TGTTTGGCTTGGGTTTTAACAAGCACATGCAG--GCAAAGAAAACCCGTGATTTCTCTGG 709
**** *** ** * * * * *** * * * * * * **** *
consensus_10366#1 C--CTAGC-TAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCA 830
consensus_10366#3 C--CTAGC-TAGCAGTAGCCCTCCATGAAAAGATATTTACATGAAACTGTACCCCCCCCC 502
consensus_10366#0 C--CTAGC-TAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCA 2392
consensus_10366#2 CGGTTGGCGCATGANGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCA-ACTATCCTTT 768
* * ** * * * * ** * * * * **** * * ** **
consensus_10366#1 CGATATTATATATGAGATTAAA-------------------------------------- 852
consensus_10366#3 CGATATTATATATGAGATTGGATTTTAAACTCTCGAGGGGATGTCTCATCGTTGCTTGTA 562
consensus_10366#0 CGATATTATATATGAGATTGGATTTTAAACTCTTGAGGGGATGTCTCATCGTTGCTTGTA 2452
consensus_10366#2 T----------------------------------------------------------- 769
consensus_10366#1 ------------------------------------------------------------
consensus_10366#3 TGTTAAATTGAGAAGATGTATTAACATGTGAAAAAAAAAAAAAAAA-------------- 608
consensus_10366#0 TGTTNAATTGAGAAGATGTATTANCATGTGATATATCTTATTATAAGCATTCAACTTAAA 2512
consensus_10366#2 ------------------------------------------------------------
consensus_10366#1 ----
consensus_10366#3 ----
consensus_10366#0 ATTT 2516
consensus_10366#2 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||