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Oryza sativa
cluster # 10382 cluster # 10382       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10382#0 length = 2014 sequences # 7  

consensusID : consensus_10382#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2014
fasta sequence
                              [TGAGGATACAAATAGTGTAAACATGAAGAATTCATTGGTTCCGAATGATGAGAAAGGAACAACAGCTTACTTGTCAGATTCTGCTGTGATGAAATCCTCATCAACAAGATCTAAAGATAATAACAAGATTATGAGGGATAACACAGCTGTCTGTGCAACTGGAGTAACAACCCTTTTGCAGAATGGAATAAAAAAGATGGCTGAAGCAGGCGCTGAGCGTGAGTGTTCTTCCCCTGCTGAAGATTGTGCTAAAGGTACTCCAAAGGAAGAGCATGGAGGATTGATATCGAACAACATCTCTGGCAATACACAATTTGGAACTTCCATGGCGATACCAAATGAAAATAAAGGTACATCTCCTGGAAAGAAAAGATATAACTTAACTGAGGCTGAACCTGGCTCGGAGCTGGAGGGTGTCTCTTCATTGAATCAATATTTTCCTCCAGGTGATAATGTAAAACATGAGTTAAACTTGGTTGAAAATGGTGTTGGGAATAACCATGATTGCAACGCAGATCATGTTCCTGGACAGCCCTTTTCCAACTTCAATGATTCACACTATTATATCCATCCACTCATCAAGGAAAAGATGACTCAGCTTTGGGACAATACGTTCAAGCAAGATAAGCTGGCACCATGTCACCCTGAAGATCCGTTATGTTATCCCGATGAGAGAAGGCGTGTGGGTTCCTCGATAAAACTTACAGAAACAACAGATGTGATGGATCAAGTTTCAAGAGCAAAATCCTTGGGTATCCTTGAGCACTCACCTGATGATGAAGTAGAAGGGGAAATGCTGTACTTGCAAGCCAGGCTACTTGACACTGCTGCCTTTCTGAAGCACAAATATGAAGATTTAATAGCAAAGGTTGTCCAGAATCTCTCTCGTGAGTTGGATGCTTTCAGTAGGAGAAAATGGGATTTTATTTTTGTCAATCAGTTTCTCCGTGATGTTAGAGAAGCTAAGAAACGTGGGAGAAAAGAGAAGAGACATAAAGAAGCCCAGGCCATTCTGGCTGCAGCTGCAGCTGCAGTTGTGGCCTCCTCACGTAACTCAACTGTGAGAAAAGATGCCAATGATGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGTTGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGCACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTCCAGATGCAAGGCTGCAGTCCACATAGGTTGCTATAGAAATATTGAGAATATTTCTGGCCCCTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATCAGATTGCAATGGCACAAACCTGTCCTTAGTGCAGTGTGATCTGTGCCATGGCACATCAGGTGCATTTAGAAAGACTGCAGATGGACAGTGGATTCATGCTTTCTGTGCTGAGTGGTTGTTGGAGACCGAGTATGTGAGGGGACAAGATAGTCCAGTCAAAGGAATGGAAAGTCTTGTAAAGGACAAAGATACTTGCTGTGTCTGCCTTCATACTGTTGGCGCATGTCTAAAGTGCAATAATGGGGACTGCCAAACCACTTTTCATCCTTATTGTGCTAGACATGCTGGTTTCTACATGAACACAAAAGGATCTGGTGGTATTTTGCAACACAAGGCATATTGTAGCAAACACAGCATAGAGCAAAAGGAGGCTGATATGCAACAGTATGGACTTGAGGAGTTCAACAACATGAAAAGAATGAGGGTTGAGTTGGAAAAATTGCGACTCTTGTGCGAGAGGATAATTAAGAGAGAAAAGGTGAAGCGTGAGAGGGTTCTATGTGATCATGACATACTTGCCAAAACGAAGGATACTCTTGTTTTCTCCTACCTTACACATGGAGCAAGTTCAGAA]

[+] EMBL CB640757             [TGAGGATACAAATAGTGTAAACATGAAGAATTCATTGGTTCCGAATGATGAGAAAGGAACAACAGCTTACTTGTCAGATTCTGCTGTGATGAAATCCTCATCAACAAGATCTAAAGATAATAACAAGATTATGAGGGATAACACAGCTGTCTGTGCAACTGGAGTAACAACCCTTTTGCAGAATGGAATAAAAAAGATGGCTGAAGCAGGCGCTGAGCGTGAGTGTTCTTCCCCTGCTGAAGATTGTGCTAAAGGTACTCCAAAGGAAGAGCATGGAGGATTGATATCGAACAACATCTCTGGCAATACACAATTTGGAACTTCCATGGCGATACCAAATGAAAATAAAGGTACATCTCCTGGAAAGAAAAGATATAACTTAACTGAGGCTGAACCTGGCTCGGAGCTGGAGGGTGTCTCTTCATTGAATCAATATTTTCCTCCAGGTGATAATGTAAAACATGAGTTAAACTTGGTTGAAAATGGTGTTGGGAATAACCATGATTGCAACGCAGATCATGTTCCTGGACAGCCCTTTTCCAACTTCAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB634921             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGTTAACTTTAGATGAAAATGGTGTTGGGAATAACCATGATTGCAACGCAGATCATGTTCCTGGACAGCCCTTTTCCAACTTCAATGATTCACACTATTATATCCATCCACTCATCAAGGAAAAGATGACTCAGCTTTGGGACAATACGTTCAAGCAAGATAAGCTGGCACCATGTCACCCTGAAGATCCGTTATGTTATCCCGATGAGAGAAGGCGTGTGGGTTCCTCGATAAAACTTACAGAAACAACAGATGTGATGGATCAAGTTTCAAGAGCAAAATCCTTGGGTATCCTTGAGCACTCACCTGATGATGAAGTAGAAGGGGAAATGCTGTACTTGCAAGCCAGGCTACTTGACACTGCTGCCTTTCTGAAGCACAAATATGAAGATTTAATAGCAAAGGTTGTCCAGAATCTCTCTCGTGAGTTGGATGCTTTCAGTAGGAGAAAATGGGATTTTATTTTTGTCAATCAGTTTCTCCGTGATGTTAGAGAAGCTAAGAAACGTGGGAGAAAAGAGAAGAGACATAAAGAAGCCCAGGCCATTCTGGCTGCAGCTGCAGCTGCAGTTGCGGCCTCCTCACGTAACTCAACTGTGAGAAAAGATGCCAATGATGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGTTGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF307521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATAGCAAAGGTTGTCCAGAATCTCTCTCGTGAGTTGGATGCTTTCAGTAGGAGAAAATGGGATTTTATTTTTGTCAATCAGTTTCTCCGTGATGTTAGAGAAGCTAAGAAACGTGGGAGAAAAGAGAAGAGACATAAAGAAGCCCAGGCCATTCTGGCTGCAGCTGCAGCTGCAGTTGTGGCCTCCTCACGTAACTCAACTGTGAGAAAAGATGCCAATGATGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGTTGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGCACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTCCAGATGCAAGGCTGCAGTCCACATAGGTTGCTATAGAAATATTGAGAATATTTCTGGCCCCTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATCAGATTGCAATGGCACAAACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF324316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAAGAGACATAAAGAAGCCCAGGCCATTCTGGCTGCAGCTGCAGCTGCAGTTGTGGCCTCCTCACGTAACTCAACTGTGAGAAAAGATGCCAATGATGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGTTGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGCACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTCCAGATGCAAGGCTGCAGTCCACATAGGTTGCTATAGAAATATTGAGAATATTTCTGGCCCCTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATCAGATTGCAATGGCACAAACCTGTCCTTAGTGCAGTGTGATCTGTGCCATGGCACATCAGGTGCATTTAGAAAGACTGCAGATGGACAGTGGATTCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF323822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAAGAGACATAAAGAAGCCCAGGCCATTCTGGCTGCAGCTGCAGCTGCAGTTGTGGCCTCCTCACGTAACTCAACTGTGAGAAAAGATGCCAATGATGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGTTGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGCACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTCCAGATGCAAGGCTGCAGTCCACATAGGTTGCTATAGAAATATTGAGAATATTTCTGGCCCCTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATCAGATTGCAATGGCACAAACCTGTCCTTAGTGCAGTGTGATCTGTGCCATGGCACATCAGGTGCATTTAGAAAGACTGCAGATGGACAGTGGATTCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB639671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACGTAACTCAACTGTGAGAAAAGATGCCAATGATGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGTTGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGCACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTCCAGATGCAAGGCTGCAGTCCACATAGGTTGCTATAGAAATATTGAGAATATTTCTGGCCCCTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATCAGATTGCAATGGCACAAACCTGTCCTTAGTGCAGTGTGATCTGCGCCATGGCACATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB630847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAAAATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGCACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTCCAGATGCAAGGCTGCAGTCCACATAGATTGCTATAGAAATATTGAGAATATTTCTGGCCCCTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATCAGATTGCAATGGCACAAACCTGTCCTTAGTGCAGTGTGATCTGTGCCATGGCACATCAGGTGCATTTAGAAAGACTGCAGATGGACAGTGGATTCATGCTTTCTGTGCTGAGTGGTTGTTGGAGACCGAGTATGTGAGGGGACAAGATAGTCCAGTCAAAGGAATGGAAAGTCTTGTAAAGGACAAAGATACTTGCTGTGTCTGCCTTCATACTGTTGGCGCATGTCTAAAGTGCAATAATGGGGACTGCCAAACCACTTTTCATCCTTATTGTGCTAGACATGCTGGTTTCTACATGAACACAAAAGGATCTGGTGGTATTTTGCAACACAAGGCATATTGTAGCAAACACAGCATAGAGCAAAAGGAGGCTGATATGCAACAGTATGGACTTGAGGAGTTCAACAACATGAAAAGAATGAGGGTTGAGTTGGAAAAATTGCGACTCTTGTGCGAGAGGATAATTAAGAGAGAAAAGGTGAAGCGTGAGAGGGTTCTATGTGATCATGACATACTTGCCAAAACGAAGGATACTCTTGTTTTCTCCTACCTTACACATGGAGCAAGTTCAGAA]


>consensus_10382#0 TGAGGATACAAATAGTGTAAACATGAAGAATTCATTGGTTCCGAATGATGAGAAAGGAAC AACAGCTTACTTGTCAGATTCTGCTGTGATGAAATCCTCATCAACAAGATCTAAAGATAA TAACAAGATTATGAGGGATAACACAGCTGTCTGTGCAACTGGAGTAACAACCCTTTTGCA GAATGGAATAAAAAAGATGGCTGAAGCAGGCGCTGAGCGTGAGTGTTCTTCCCCTGCTGA AGATTGTGCTAAAGGTACTCCAAAGGAAGAGCATGGAGGATTGATATCGAACAACATCTC TGGCAATACACAATTTGGAACTTCCATGGCGATACCAAATGAAAATAAAGGTACATCTCC TGGAAAGAAAAGATATAACTTAACTGAGGCTGAACCTGGCTCGGAGCTGGAGGGTGTCTC TTCATTGAATCAATATTTTCCTCCAGGTGATAATGTAAAACATGAGTTAAACTTGGTTGA AAATGGTGTTGGGAATAACCATGATTGCAACGCAGATCATGTTCCTGGACAGCCCTTTTC CAACTTCAATGATTCACACTATTATATCCATCCACTCATCAAGGAAAAGATGACTCAGCT TTGGGACAATACGTTCAAGCAAGATAAGCTGGCACCATGTCACCCTGAAGATCCGTTATG TTATCCCGATGAGAGAAGGCGTGTGGGTTCCTCGATAAAACTTACAGAAACAACAGATGT GATGGATCAAGTTTCAAGAGCAAAATCCTTGGGTATCCTTGAGCACTCACCTGATGATGA AGTAGAAGGGGAAATGCTGTACTTGCAAGCCAGGCTACTTGACACTGCTGCCTTTCTGAA GCACAAATATGAAGATTTAATAGCAAAGGTTGTCCAGAATCTCTCTCGTGAGTTGGATGC TTTCAGTAGGAGAAAATGGGATTTTATTTTTGTCAATCAGTTTCTCCGTGATGTTAGAGA AGCTAAGAAACGTGGGAGAAAAGAGAAGAGACATAAAGAAGCCCAGGCCATTCTGGCTGC AGCTGCAGCTGCAGTTGTGGCCTCCTCACGTAACTCAACTGTGAGAAAAGATGCCAATGA TGATGTAGTACCTGCTAAGCAAGAGAATTCTCCAAAATTTGGCACTGGACCTCCAAACGT TGGCCAGCGGACTTCTTCACTACTACGACTCAAGGATTTGTCAAAGCCACCCAACAACAA AATTTCACAAGATAATAACCGCAGCACTTTTCATATGCCAAATTATTCCAAAGAAAATGC ACTATACTGTGATGTATGCATGCGAAGTGAGACTGTGTTGAACCGGATATTTGTCTGCTC CAGATGCAAGGCTGCAGTCCACATAGGTTGCTATAGAAATATTGAGAATATTTCTGGCCC CTGGAAGTGTGAACTTTGCGAAGATATTTCACCAGAAGACACTTGTGTTGGTGATCAATC AGATTGCAATGGCACAAACCTGTCCTTAGTGCAGTGTGATCTGTGCCATGGCACATCAGG TGCATTTAGAAAGACTGCAGATGGACAGTGGATTCATGCTTTCTGTGCTGAGTGGTTGTT GGAGACCGAGTATGTGAGGGGACAAGATAGTCCAGTCAAAGGAATGGAAAGTCTTGTAAA GGACAAAGATACTTGCTGTGTCTGCCTTCATACTGTTGGCGCATGTCTAAAGTGCAATAA TGGGGACTGCCAAACCACTTTTCATCCTTATTGTGCTAGACATGCTGGTTTCTACATGAA CACAAAAGGATCTGGTGGTATTTTGCAACACAAGGCATATTGTAGCAAACACAGCATAGA GCAAAAGGAGGCTGATATGCAACAGTATGGACTTGAGGAGTTCAACAACATGAAAAGAAT GAGGGTTGAGTTGGAAAAATTGCGACTCTTGTGCGAGAGGATAATTAAGAGAGAAAAGGT GAAGCGTGAGAGGGTTCTATGTGATCATGACATACTTGCCAAAACGAAGGATACTCTTGT TTTCTCCTACCTTACACATGGAGCAAGTTCAGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)