cluster # 10390

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Oryza sativa
cluster # 10390 cluster # 10390 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10390#0 length = 1409 sequences # 7
consensusID : consensus_10390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1409
fasta sequence
                              [TTCGCACAGGCACCCAGCCATGCTGAAGTTGGAGCCGGAGTTCCCCGGCCTGCCGCAGCGGTGCGACTCGTGCCGGTCGGCGCCGTGCG-GT-TCTATTGCCTCGCCGATTCGGCGGCGCTCTGTGCCACGTGCGACGCTGACGTGCACTCCGTCAACCCGCTGGCACGCCGCCACCGCCGCGTACCAATGGGCGTGGTGGCTGCCCCCGGCGCCGGGGGAGCCTTCGTCGTCCGCCCTGCAGGCGGTGTCAACTCCTCCTGGCCAATCCGAGAGGGCAGGAGGTGCGACTACGACGATGACGACGCCGACGCCGCTGGGGAGGAAGACGAAGAGGCGACGTCGTGGCTTCTGTTCGACCCGCTCAAGGACTCCTCGGATCAGGGGCTGCCGCCGTTCGGCGACGCGCTGGTGGCCGACTTCCTCAACCTCGGCGGGGGCGCCGGGGAGAAGGAGGACGCGTCGTCGAGCAAGGACTGCAGCAGCAGCCACGGGAAGAGCAGCGAGGGCAGCCACGAGTTCGCCGTGCCCGGCGAGCCCGTACCGGAGCGCCAGGGCTTCGGGGCGGTGAGTATGGACATTACCGACTACGACGCCTCCAATTTCAGGCGCGGGTACAGCTTTGGCGCATCGCTCGGCCACAGCGTTTCGATGTCATCGCTGGAGAACATGAGCACGGTCCCAGACTGCGGTGTGCCAGACATCACCACCTCCTACTTGAGGTCATCCAAGAGCACCATCGACCTCTTCACGGCAGCAGCTGGCTCCCCTGTGGCGGCGCACAGCATAATGTCGCCACCGCAGTTCATGGGCGCCATTGACAGGGAGGCCAGGGTGCACCGGTACAGGGAGAAGAGGAAGACGAGGCGGTTCGAGAAGACCATCAGGTACGCGTCGCGGAAGGCGTATGCCGAGACCCGGCCGAGGATCAAGGGACGCTTCGCCAAGCGCAGCGACACCGACCTTGAGGTCGACCAGTACTTCTCCACCACCGCCGACTCCAGCTGCGGCGTCGTGCCCACGTTCTAGCGAGCAGCTTGGCCGCACGCCTGGAAG-ACAATCAAAGAAGCTCAGGAATGAATATATTCTCCCACTGTATAGTACATCTTGGTTGCTTAGCTATATATATATATATATATATATATATATATGTATAATTCGCCGAATCGCCTCTAAATTTGTGGGAGGTATGAGGCTTCAGCTGTAGGTATATATAGATGCTAGAAAGATGCTCCTTGTAAAATTGTGCAGGAGTAAATGTAATCATGTAGTCATCCCTCCTTCTCCAATCCTTTACAATACATTTCTGTTTTTTTATTCAGCTTAAAAACTACGTTTTGTTTTTTCTCCCGATAACGCTATTGATCTGATGGTAAATTTTGATCAATAATAATTCTCGTTCAGAAAAAAAA]

[+] EMBL AB001887             [TTCGCACAGGCACCCAGCCATGCTGAAGTTGGAGCCGGAGTTCCCCGGCCTGCCGCAGCGGTGCGACTCGTGCCGGTCGGCGCCGTGCGCGT TCTATTGCCTCGCCGATTCGGCGGCGCTCTGTGCCACGTGCGACGCTGACGTGCACTCCGTCAACCCGCTGGCACGCCGCCACCGCCGCGTACCAATGGGCGTGGTGGCTGCCCCCGGCGCCGGGGGAGCCTTCGTCGTCCGCCCTGCAGGCGGTGTCAACTCCTCCTGGCCAATCCGAGAGGGCAGGAGGTGCGACTACGACGATGACGACGCCGACGCCGCTGGGGAGGAAGACGAAGAGGCGACGTCGTGGCTTCTGTTCGACCCGCTCAAGGACTCCTCGGATCAGGGGCTGCCGCCGTTCGGCGACGCGCTGGTGGCCGACTTCCTCAACCTCGGCGGGGGCGCCGGGGAGAAGGAGGACGCGTCGTCGAGCAAGGACTGCAGCAGCAGCCACGGGAAGAGCAGCGAGGGCAGCCACGAGTTCGCCGTGCCCGGCGAGCCCGTACCGGAGCGCCAGGGCTTCGGGGCGGTGAGTATGGACATTACCGACTACGACGCCTCCAATTTCAGGCGCGGGTACAGCTTTGGCGCATCGCTCGGCCACAGCGTTTCGATGTCATCGCTGGAGAACATGAGCACGGTCCCAGACTGCGGTGTGCCAGACATCACCACCTCCTACTTGAGGTCATCCAAGAGCACCATCGACCTCTTCACGGCAGCAGCTGGCTCCCCTGTGGCGGCGCACAGCATAATGTCGCCACCGCAGTTCATGGGCGCCATTGACAGGGAGGCCAGGGTGCACCGGTACAGGGAGAAGAGGAAGACGAGGCGGTTCGAGAAGACCATCAGGTACGCGTCGCGGAAGGCGTATGCCGAGACCCGGCCGAGGATCAAGGGACGCTTCGCCAAGCGCAGCGACACCGACCTTGAGGTCGACCAGTACTTCTCCACCACCGCCGACTCCAGCTGCGGCGTCGTGCCCACGTTCTAGCGAGCAGCTTGGCCGCACGCCTGGAAG ACAATCAAAGAAGCTCAGGAATGAATATATTCTCCCACTGTATAGTACATCTTGGTTGCTTAGCTATATATATATATATATATATATATATATATGTATAATTCGCCGAATCGCCTCTAAATTTGTGGGAGGTATGAGGCTTCAGCTGTAGGTATATATAGATGCTAGAAAGATGCTCCTTGTAAAATTGTGCAGGAGTAAATGTAATCATGTAGTCATCCCTCCTTCTCCAATCCTTTACAATACATTTCTGTTTTTTTATTCAGCTTAAAAACTACGTTTTGTTTT                                                                    ]
[+] EMBL OSS12569A            [TTCGCACAGGCACCCAGCCATGCTGAAGTTGGAGCCGGAGTTCCCCGGCCTGCNGCAGCGGTGCGACTCGTGCCGGTCGGCGCCGTGCG GTNTCTATNGCCTCGCCGATTCGGGGACGCTCTGTGCCACGTGCGACGCTGACGTGCACTCCGTCAACCCGCTGGCACGACGNCACCGCCGCGTACCAATGGGCGTGGTGGCTGCCCCCGGCGCCGGGGGAGCCTTCGTNGTCCGACCTGCAGGCGGTGTCAACTCCTNCTGGCCAATCCGAGAGGGCAGGAGGTGCGACTACGACGATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS13576A            [TTCGCACAGGCACCCAGCCATGCTGAAGTTGGAGCCGGAGTTCCCCGGCCTGCCGCAGCGGTGCGACTCGTGCCGGTCGGCGCCGTGCG GTNTCTATTGCCTCGCCGATTCGG GGCGCTCTGTGCCACGTGCGACGCTGACGTGCACTCCGTCAACCCGCTGGCACGCCGCCACCGNCGCGTACCAATGGGCGTGGTGGCTGCCCCCGGCGNCGGGGGAGCCTTCGTCGTCCGCCCTGCAGGCGGTGTCAACTCCTCCTGGCCAATCCGAGAGGGCAGGAGGTGCGACTACGACGATGACGACGCCGACGCCGCTGGGGAGGAAGACG AGAGGCGACGTCGTGGCTTCTGTTCGACCCG TNAAGGACTTCTCGGATCAAGGGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU174681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGGGCGGTGAGTATGGACATTACCGACTACGACGCCTCCAATTTCAGGCGCGGGTACAGCTTTGGCGCATCGCTCGGCCACAGCGTTTCGATGTCATCGCTGGAGAACATGAGCACGGTCCCAGACTGCGGTGTGCCAGACATCACCACCTCCTACTTGAGGTCATCCAAGAGCACCATCGACCTCTTCACGGCAGCAGCTGGCTCCCCTGTGGCGGCGCACAGCATAATGTCGCCACCGCAGTTCATGGGCGCCATTGACAGGGAGGCCAGGGTGCACCGGTACAGGGAGAAGAGGAAGACGAGGCGGTTCGAGAAGACCATCAGGTACGCGTCGCGGAAGGCGTATGCCGAGACCCGGCCGAGGATCAAGGGACGCTTCGCCAAGCGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB678870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGCATAATGTCGCCACCGCAGTTCATGGGCGCCATTGACAGGGAGGCCAGGGTGCACCGGTACAGGGAGAAGAGGAAGACGAGGCGGTTCGAGAAGACCATCAGGTACGCGTCGCGGAAGGCGTATTTCGAGACCCGGCCGAGGATCAAGGGAGGGTTAGCCAAGCGCAGCGACTCCGACCTTGAGGTCGACCAGTAATTCTCCACCTCCGCGGACTCCAGGTGCGGAGTCGTGCCCACGTTCTAGTGAGCAGCTTGGCCGCACGCGTGGAAGTACAATCAAAGAAGCTCAGGAATGAATATATTCTCCCACGGTATAGTGCATCTTGGTTGGCTAGCTATATATATATATATATATATATATATATATGTATAATTCGCCGAATCGCCTCTAAATTTGTGGGAGGTATGAGGCTTCAGCTGTAGGTATATATAGATGATAGAAAGATGCTCCTTGTAAAATTGTGCAGGAGTAAAGGTAATCATGTAGTCATCCCTCCTTCTCCAATCATTTACAATACATTTGCGTTT                                                                                                    ]
[+] EMBL AU174680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAGCGCAGCGACNCCGACCTTGAGGTCGACCAGTACTTCTCCACCACCGCCGACTCCAGCTGCGGCGTCGTGCCCACGTTCTAGCGAGCAGCTTGGCCGCACGCCTGGAAG ACAATCAAAGAAGCTCAGGAATGAATATATTCTCCCNCTGTATAGTACATCTTGGTTGCTTAGCTATATATATATATATATATATATATATATATGTATAATTCGCCGAATCGCCTCTAAATTTGTGGGAGGTATGAGGCTTCAGCTGTAGGTATATATAGATGCTAGAAAGATGCTCCTTGTAAAATTGTGCAGGAGTAAATGTAATCATGTAGTCATCCCTCCTTCTCCAATCCTTTACAATACATTTCTGTTTTTTTATTCAGCTTAAAAACTACGTTTTGTTTTTTCTCCCGATAACGCTATTGATCTGATGGTAAATTTTGATCAATAATAATTCTCGTTCAGAAAAAAAA]
[+] EMBL AU032631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cnAGGAATGAATATATTCTCCNACTGTATAGTACATCTTGGTTGCTTAGNTATATATATATATATATATATATATATATATGTATAATTCGCCGANTCGCCTCTAAATTTNAANAAGNTATGANNCCCCCCCTGTAGGTATATATAGATGCTAGAAAGATGCTCCTTGTAAAATTGTGCAGGAGTAAATGTAATNATGTAGTCATCCCTCCTTCTCCAATCCTTTACAATACATTTCTGTTTTTTTATTCAGCTTAAAAACTACGTTTTGTTTTTTCTCCCGATAAaaaaaaa                                                 ]




>consensus_10390#0
TTCGCACAGGCACCCAGCCATGCTGAAGTTGGAGCCGGAGTTCCCCGGCCTGCCGCAGCG
GTGCGACTCGTGCCGGTCGGCGCCGTGCGGTTCTATTGCCTCGCCGATTCGGCGGCGCTC
TGTGCCACGTGCGACGCTGACGTGCACTCCGTCAACCCGCTGGCACGCCGCCACCGCCGC
GTACCAATGGGCGTGGTGGCTGCCCCCGGCGCCGGGGGAGCCTTCGTCGTCCGCCCTGCA
GGCGGTGTCAACTCCTCCTGGCCAATCCGAGAGGGCAGGAGGTGCGACTACGACGATGAC
GACGCCGACGCCGCTGGGGAGGAAGACGAAGAGGCGACGTCGTGGCTTCTGTTCGACCCG
CTCAAGGACTCCTCGGATCAGGGGCTGCCGCCGTTCGGCGACGCGCTGGTGGCCGACTTC
CTCAACCTCGGCGGGGGCGCCGGGGAGAAGGAGGACGCGTCGTCGAGCAAGGACTGCAGC
AGCAGCCACGGGAAGAGCAGCGAGGGCAGCCACGAGTTCGCCGTGCCCGGCGAGCCCGTA
CCGGAGCGCCAGGGCTTCGGGGCGGTGAGTATGGACATTACCGACTACGACGCCTCCAAT
TTCAGGCGCGGGTACAGCTTTGGCGCATCGCTCGGCCACAGCGTTTCGATGTCATCGCTG
GAGAACATGAGCACGGTCCCAGACTGCGGTGTGCCAGACATCACCACCTCCTACTTGAGG
TCATCCAAGAGCACCATCGACCTCTTCACGGCAGCAGCTGGCTCCCCTGTGGCGGCGCAC
AGCATAATGTCGCCACCGCAGTTCATGGGCGCCATTGACAGGGAGGCCAGGGTGCACCGG
TACAGGGAGAAGAGGAAGACGAGGCGGTTCGAGAAGACCATCAGGTACGCGTCGCGGAAG
GCGTATGCCGAGACCCGGCCGAGGATCAAGGGACGCTTCGCCAAGCGCAGCGACACCGAC
CTTGAGGTCGACCAGTACTTCTCCACCACCGCCGACTCCAGCTGCGGCGTCGTGCCCACG
TTCTAGCGAGCAGCTTGGCCGCACGCCTGGAAGACAATCAAAGAAGCTCAGGAATGAATA
TATTCTCCCACTGTATAGTACATCTTGGTTGCTTAGCTATATATATATATATATATATAT
ATATATATGTATAATTCGCCGAATCGCCTCTAAATTTGTGGGAGGTATGAGGCTTCAGCT
GTAGGTATATATAGATGCTAGAAAGATGCTCCTTGTAAAATTGTGCAGGAGTAAATGTAA
TCATGTAGTCATCCCTCCTTCTCCAATCCTTTACAATACATTTCTGTTTTTTTATTCAGC
TTAAAAACTACGTTTTGTTTTTTCTCCCGATAACGCTATTGATCTGATGGTAAATTTTGA
TCAATAATAATTCTCGTTCAGAAAAAAAA
clustalw multiple alignements is not computed in this case