These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10398#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1755 fasta sequence [GTCGCGCCGCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC-C-TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC-CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGATAATGACTACTAGGGGGTACCAGAACATTGCTGTCAAGTACTTGCAGAAAACAGGGCTACGACACAGCAAGATGCAATTGAAGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA-TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACTTTTATGTGCCA] [+] EMBL AK070633 [GTCGCGCCGCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC C TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGATAATGACTACTAGGGGGTACCAGAACATTGCTGTCAAGTACTTGCAGAAAACAGGGCTACGACACAGCAAGATGCAATTGAAGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGCGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACT ] [+] EMBL AK104960 [ TCGCGCCGCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC C TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGATAATGACTACTAGGGGGTACCAGAACATTGCTGTCAAGTACTTGCAGAAAACAGGGCTACGACACAGCAAGATGCAATTGAAGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACT ] [+] EMBL CB665770 [ GCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGCGC TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTACGGGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAACAGAATGGTCTACCACAAACACTAGGATATTTTG ] [+] EMBL CB664748 [ CTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC CGTTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGgat ] [+] EMBL CB618498 [ CTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCAGCGCCGCCGCGTTCCCAACTCCATGTCCTGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGTGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAGTCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTGCGGTACCGCGATCAATTGGTAAGAAACCGAACCCAATCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGAAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCGTCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCACACAATCTCTGCGCACAAGGATTTGTCGACAGTGAGACATCTAATGGAAGTGGAATGAAGGAGGTTGACAAAGCATAATGGTCTACCACAAACtatttt ] [-] EMBL CB664749 [ AGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAAGTGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACTTT ] [-] EMBL CB665771 [ TGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACTTTTATGTGCCA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||