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Oryza sativa
cluster # 10418 cluster # 10418       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10418#0 length = 1330 sequences # 5  
consensus_10418#1 length = 832 sequences # 1  
consensus_10418#2 length = 665 sequences # 1  

consensusID : consensus_10418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1330
fasta sequence
                              [GAGGGCAGAGGTGGGAGCGAAAATATCCGAAGAGAGAGCTCGCGGAAATGGCGGCGATGGTGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGGCACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCTCCAAGTACAAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATTGGCGGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCAAGAATGATGATTTGTCTGTTGAGGATGATGACGATGGAATTTCAGAAGAAGATATGGCAAGATTTGAGCAGGAGTTGGCAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAGAGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCTCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGATAATTACTTCAAATTAGCATGTATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATATGGAGTATGTTTTATATTAGTACTCCCATATCAACCAATGTGACAGGTACAACTCTTAATTGCCACTTTGATAATTTTATTTGTTGCACTCTGGACCACCATTTTCTTTAATGGCTTCAGTGAAAGTCGGCTGGGGTTCTGTTGACCAGATCTTGATTTTCTGAATGATAAATGTCACAATAGATTCTGTCTTGTTCTTGCTTAGAGGGGTTTTCTTATTGGAAGCAAGGCG]

[+] EMBL AK071330             [GAGGGCAGAGGTGGGAGCGAAAATATCCGAAGAGAGAGCTCGCGGAAATGGCGGCGATGGTGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGGCACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCTCCAAGTACAAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATTGGCGGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCAAGAATGATGATTTGTCTGTTGAGGATGATGACGATGGAATTTCAGAAGAAGATATGGCAAGATTTGAGCAGGAGTTGGCAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAGAGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCTCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGATAATTACTTCAAATTAGCATGTATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATATGGAGTATGTTTTATATTAGTACTCCCATATCAACCAATGTGACAGGTACAACTCTTAATTGCCACTTTGATAATTTTATTTGTTGCACT                                                                                                                                              ]
[+] EMBL AY224485             [                                                                                                        GCGCGAGTGTTCCTGGCACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCTCCAAGTACAAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATTGGCGGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCAAGAATGATGATTTGTCTGTTGAGGATGATGACGATGGAATTTCAGAAGAAGATATGGCAAGATTTGAGCAGGAGTTGGCAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAGAGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCTCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACC                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB652690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGGTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAG CCTCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGATAATTACTTCAAATTAGCATGTATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATATGGAGTATGTTTTATATTAGTACTCCCATATCAACCAAGGTGACAGGTACAACTCTTAATTGCCACTTTGATAATTTTATTTGTTGCACTCTGGACCACCATTTTCTTTAATGGCTTCA                                                                                                                 ]
[-] EMBL CB680269             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCTCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGATAATTACTTCAAATTAGCATGTATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATATGGAGTATGTTTTATATTAGTACTCCCATATCAACCAATGTGACAGGTACAACTCTTAATTGCCACTTTGATAATTTTATTTGTTGCACTCTGGCCCACCATTTTGACTATTAGCTTCAGTGAAAGTCGGCTGGGGTTCTGTTGACCAGATCTTGATTTTCTGAATGATAAATGTCACAATAGATTCTGTCTTGTTCTTGCTTAGAGGGGTTTTCTTATTGGAAGCAAGGCG]
[+] EMBL CF195990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGATAATTACTTCAAATTAGCATGTATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTNNNTTTGAATTTTTGAAGTAGNNGAATTTCTGCAAGCCCAnnnnnnaaa                                                                                                                                                                                                                                  ]


>consensus_10418#0 GAGGGCAGAGGTGGGAGCGAAAATATCCGAAGAGAGAGCTCGCGGAAATGGCGGCGATGG TGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGG CACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCT CCAAGTACAAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATTGGCGGTG GTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCA AGAATGATGATTTGTCTGTTGAGGATGATGACGATGGAATTTCAGAAGAAGATATGGCAA GATTTGAGCAGGAGTTGGCAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAG AGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAAC GGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCC GTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTG AATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAG ACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCTCTCCAGTAGTTGATAACGCTGATG TCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTT CACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCA AACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGA CCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTG CATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGATAATTACTTCAAATTAGCATGT ATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGA ATTTCTGCAAGCCCAATATGGAGTATGTTTTATATTAGTACTCCCATATCAACCAATGTG ACAGGTACAACTCTTAATTGCCACTTTGATAATTTTATTTGTTGCACTCTGGACCACCAT TTTCTTTAATGGCTTCAGTGAAAGTCGGCTGGGGTTCTGTTGACCAGATCTTGATTTTCT GAATGATAAATGTCACAATAGATTCTGTCTTGTTCTTGCTTAGAGGGGTTTTCTTATTGG AAGCAAGGCG



consensusID : consensus_10418#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [CAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAGAGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCCCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGNTGATAATTACTTCAAATTAGCATGTATGATGGNTTCCTCTTTGNACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATATGGAGTATGGTTTATATTAGTACTCCCATATCAACCATGNGACAGGTACAACTCTTAATTGNCACTTGATAATTTATTTGGTGCAAAAAAAAAAAAAAAAAAAAGCGGCGCC]

[+] EMBL CA764204             [CAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAGAGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCCCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGNTGATAATTACTTCAAATTAGCATGTATGATGGNTTCCTCTTTGNACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATATGGAGTATGGTTTATATTAGTACTCCCATATCAACCATGNGACAGGTACAACTCTTAATTGNCACTTGATAATTTATTTGGTGCAAAAAAAAAAAAAAAAAAAAGCGGCGCC]


>consensus_10418#1 CAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAGAGGGTTCGTCATTAGGCT CTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAAACGGCCAGAGCTGAAAAACT GGCAACTTAAGAGGCTGGCTCGTGCTCTCAAAATAGGTCGCCGTAAAACTAGTATAAAGA ATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCATTGAATTGCTCCGAAATCCAC CTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGAAGACCCTTCTAAACCTGAAA TCAAGGAAATAGAGCCCCCTCCAGTAGTTGATAACGCTGATGTCACTGAAACCAAGCCAC AGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTCTTCACAGAAAAGATTAAAAA AGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAACCAAACGCCCTACAAATACAA TGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAAGACCATTGTTAAGTGGTTTG AGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGTTGCATTCAAGAGATCCCTAT CTGAGACCATAGCTAGNTGATAATTACTTCAAATTAGCATGTATGATGGNTTCCTCTTTG NACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAGAAGAATTTCTGCAAGCCCAATA TGGAGTATGGTTTATATTAGTACTCCCATATCAACCATGNGACAGGTACAACTCTTAATT GNCACTTGATAATTTATTTGGTGCAAAAAAAAAAAAAAAAAAAAGCGGCGCC



consensusID : consensus_10418#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [CGCGGAAATGGCGGCGATGGTGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGGCACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCTCCAAGTACCAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATCGGCGGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCAAGAATGATGATCTGTCTGTTGAGGATGATGACGATGGAATCTCGGAAGAAGATATGGCCAGATTTGAGCAGGAGTGGGCAGAGGCCATCGGGGATATCGCTGATGCTGATGAATCTGGAGAGGGTCCGTCATCAAGCTCTGATGCTATGGGAATGATGANAAACGGATGAGTATCAACGGCAGAGCTGAAAACTGGCAACTAAGAGGCTGGCTGTGCTTCAAATAGGTCGCGTANACTAGTATAAGATCTGCACGGACCTAGGCCTGATAGACTTGGTCTGGATGCTCCAATCACCTCAAACTCTATCGGTCGATCCTTGCCGATGACACCCTTAACCCGAATCCGAATCACCTCTCGTATGATCCCATTTCCGACCAGCCCACGGACTCGTCGGTTGTCCATGT]

[+] EMBL CA753018             [CGCGGAAATGGCGGCGATGGTGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGGCACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCTCCAAGTACCAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATCGGCGGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCAAGAATGATGATCTGTCTGTTGAGGATGATGACGATGGAATCTCGGAAGAAGATATGGCCAGATTTGAGCAGGAGTGGGCAGAGGCCATCGGGGATATCGCTGATGCTGATGAATCTGGAGAGGGTCCGTCATCAAGCTCTGATGCTATGGGAATGATGANAAACGGATGAGTATCAACGGCAGAGCTGAAAACTGGCAACTAAGAGGCTGGCTGTGCTTCAAATAGGTCGCGTANACTAGTATAAGATCTGCACGGACCTAGGCCTGATAGACTTGGTCTGGATGCTCCAATCACCTCAAACTCTATCGGTCGATCCTTGCCGATGACACCCTTAACCCGAATCCGAATCACCTCTCGTATGATCCCATTTCCGACCAGCCCACGGACTCGTCGGTTGTCCATGT]


>consensus_10418#2 CGCGGAAATGGCGGCGATGGTGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCC AGGGGCGCGAGTGTTCCTGGCACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTG CGCCCTTCGCCGGAGGCCCTCCAAGTACCAGAATAAAATCCAGAATGAGGAGGTTGTAGT AGAGGATGATATCGGCGGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAA GCAGTTGGAAGAAGATCTCAAGAATGATGATCTGTCTGTTGAGGATGATGACGATGGAAT CTCGGAAGAAGATATGGCCAGATTTGAGCAGGAGTGGGCAGAGGCCATCGGGGATATCGC TGATGCTGATGAATCTGGAGAGGGTCCGTCATCAAGCTCTGATGCTATGGGAATGATGAN AAACGGATGAGTATCAACGGCAGAGCTGAAAACTGGCAACTAAGAGGCTGGCTGTGCTTC AAATAGGTCGCGTANACTAGTATAAGATCTGCACGGACCTAGGCCTGATAGACTTGGTCT GGATGCTCCAATCACCTCAAACTCTATCGGTCGATCCTTGCCGATGACACCCTTAACCCG AATCCGAATCACCTCTCGTATGATCCCATTTCCGACCAGCCCACGGACTCGTCGGTTGTC CATGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10418#0      GAGGGCAGAGGTGGGAGCGAAAATATCCGAAGAGAGAGCTCGCGGAAATGGCGGCGATGG 60
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      TGGGGGCGCCGCTCGCCGTGGCCGCGGCCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGG 120
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      CACGGCCGCTCCTCCGCCGCTCGCCGCGGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCCT 180
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      CCAAGTACAAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATTGGCGGTG 240
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      GTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGCAGTTGGAAGAAGATCTCA 300
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      AGAATGATGATTTGTCTGTTGAGGATGATGACGATGGAATTTCAGAAGAAGATATGGCAA 360
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      GATTTGAGCAGGAGTTGGCAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAG 420
consensus_10418#1      ------------------CAGAGGCAATCGGGGATATTGCTGATGCTGATGAATCTGGAG 42
consensus_10418#2      ----------------------------CGCGGAAATGGC-GGCGATGGTGG----GGGC 27
                                                   ** *** ** ** *  * ** **     **  

consensus_10418#0      AGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAA-A 479
consensus_10418#1      AGGGTTCGTCATTAGGCTCTGAGGCTTATGGGAATGATGAAAAAACGGATGAAATCAA-A 101
consensus_10418#2      GCCGCTCGCCGT--GGCCGCGG---CCGCCGCCGCGCCAGGGGCGCGAGTGTTCCTGGCA 82
                          * *** * *  ***   *         *    *         **  **        *

consensus_10418#0      CGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCT-CAAAATAGGTCG 538
consensus_10418#1      CGGCCAGAGCTGAAAAACTGGCAACTTAAGAGGCTGGCTCGTGCTCT-CAAAATAGGTCG 160
consensus_10418#2      CGGCCGCTCCTCCGCCGCTCGCCGC---GGGGCGTCGCCTGCGCCCTTCGCCGGAGGCCC 139
                       *****    **      ** **  *    * *  * **  * ** ** *     *** * 

consensus_10418#0      CCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCAT 598
consensus_10418#1      CCGTAAAACTAGTATAAAGAATCTTGCAGGGGAACTAGGCCTGGATAGGACTTTGGTCAT 220
consensus_10418#2      TCCAAGTACCAGAATAAAATCCAGAATGAGGAGGTTGTAGTAGAGGATGATATCGGC--- 196
                        *  *  ** ** *****           **    *      *   * **  * **    

consensus_10418#0      TGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGA 658
consensus_10418#1      TGAATTGCTCCGAAATCCACCTCCAAAACTTCTATTCATGTCTGATTCTTTGCCTGATGA 280
consensus_10418#2      --GGTGGTGGTGAAGACGATGACGACGCGCTGGAAGCACTTTTTAAGC--AGTTGGAAGA 252
                           * *    ***  * *   * *     *  *  **  * * *  *   *   ** **

consensus_10418#0      AGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCTCTCCAGTAGTTGATAACGCTGA 718
consensus_10418#1      AGACCCTTCTAAACCTGAAATCAAGGAAATAGAGCCCCCTCCAGTAGTTGATAACGCTGA 340
consensus_10418#2      AGATC---------------TCAAGAATGATGATCTGTCTGTTGAGGATGATGACGATGG 297
                       *** *               ***** *    ** *   **   *  * **** *** ** 

consensus_10418#0      TGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTC 778
consensus_10418#1      TGTCACTGAAACCAAGCCACAGACGGAACTTCCTGTTCATGTCATGTGCGCAGAATGGTC 400
consensus_10418#2      AATCTCGGAAG--AAGATATGGCCAGA----TTTGAGCAGGA---GTGGGCAGA--GGCC 346
                         ** * ***   ***  *  * * **      **  ** *    *** *****  ** *

consensus_10418#0      TTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAAC 838
consensus_10418#1      TTCACAGAAAAGATTAAAAAAGGTGCAACTGGAGACATTAGAAAGAGTCTACTCCCGAAC 460
consensus_10418#2      ATCGGGGATATCGCTGATGCTGATGAATCTGGAG---------AGGGTCCGTCATCAAGC 397
                        **   ** *    * *    * ** * ******         ** ***      * * *

consensus_10418#0      CAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAA 898
consensus_10418#1      CAAACGCCCTACAAATACAATGATCAGCAGCATAGTTCAAGTGACAAGCCTTCCACGGAA 520
consensus_10418#2      TCTG-ATGCTATGGGAATGATGANAAACGGATGAGTATCAACGGCAGAGCT-----GAAA 451
                               ***     *  ****  * * *   ***   *  * **   **     * **

consensus_10418#0      GACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGT 958
consensus_10418#1      GACCATTGTTAAGTGGTTTGAGGATAGAAGGGAACAGGATGGGGTACCTGACCATCGAGT 580
consensus_10418#2      ACTGGCAACTAAGAGGCTGGCTGT--GCTTCAAATAGGTCGCGTANACTAGTATAAGATC 509
                                **** ** * *  *   *     ** ***  * *    **       **  

consensus_10418#0      TGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGTTGAT--AATTACTTCAAATTAGC 1016
consensus_10418#1      TGCATTCAAGAGATCCCTATCTGAGACCATAGCTAGNTGAT--AATTACTTCAAATTAGC 638
consensus_10418#2      TGCACGGACCTAGGCCTGAT---AGACTTGGTCTGGATGCTCCAATCACCTCAAACTCTA 566
                       ****   *      **  **   ****     ** * ** *  *** ** ***** *   

consensus_10418#0      ATGTATGATGGTTTCCTCTTTGAACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAG 1076
consensus_10418#1      ATGTATGATGGNTTCCTCTTTGNACTATTTGCAAATTCTAAATTTGAATTTTTGAAGTAG 698
consensus_10418#2      TCGGTCGATCCTTGCCGATGACACCCTTAACCCGAATCCGAATC--ACCTCTCGTATGAT 624
                         *   ***   * **  *     *  *   *  * **  ***   *  * * * *  * 

consensus_10418#0      AAGAATTTCTGCAAGCCCAATATGGAGT-ATGTTTTATATTAGTACTCCCATATCAACCA 1135
consensus_10418#1      AAGAATTTCTGCAAGCCCAATATGGAGT-ATGGTTTATATTAGTACTCCCATATCAACCA 757
consensus_10418#2      CCCATTTCCGACCAGCCCA---CGGACTCGTCGGTTGTCCATGT---------------- 665
                          * ** *  * ******    *** *  *   ** *    **                

consensus_10418#0      ATGTGACAGGTACAACTCTTAATTGCCACTTTGATAATTTTATTTGTTGCACTCTGGACC 1195
consensus_10418#1      -TGNGACAGGTACAACTCTTAATTGNCACTT-GATAATTT-ATTTGGTGCAAAAAAAAAA 814
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      ACCATTTTCTTTAATGGCTTCAGTGAAAGTCGGCTGGGGTTCTGTTGACCAGATCTTGAT 1255
consensus_10418#1      AAAAAAAAAAGCGGCGCC------------------------------------------ 832
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      TTTCTGAATGATAAATGTCACAATAGATTCTGTCTTGTTCTTGCTTAGAGGGGTTTTCTT 1315
consensus_10418#1      ------------------------------------------------------------
consensus_10418#2      ------------------------------------------------------------
                                                                                   

consensus_10418#0      ATTGGAAGCAAGGCG 1330
consensus_10418#1      ---------------
consensus_10418#2      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)