These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10421#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2171 fasta sequence [GCGGCTAACTCAATCCCTTTCTCTGGAGTCTTGGAGCGGCACGGCGGCTGCGCACGCGACCTCGCCCACCACCTGCTCGGCGAAACGCCCGGCTCGGCCGCGACGTGTCCCACCGCACCGCGCGCGCACGCCGCGCCGCGCCCGAGCCCCTCGCCGCCTCCGCGCGGCGCGCCGCGCACCTATTTAAATGCGGCCCCGATCCCGCATTCTCTCAACTGCACTAGTCCCCACCAACGGCTCGGTCCAGTAGAGTTTAT--CCCCCACCTATGGCCAGCCTCGTGCTCTCCCTGCGCATCGCGCCG-TCCACGCCGCCGCTGGGGCTGGGCGGGGGGCGATTCCGCGGCCGACGAGGGGCCGTCGCCTGCCGCGCCGCCACGTTCCAGCAGCTCGACGCCGTCGCGGTGAGGGAGGAGGAGTCCAAGTTCAAGGCGGGGGCGGCGGAGGGTTGCAACATCCTGCCGCTCAAGCGATGCATCTTCTCCGACCACCTCACGCCGGTGCTCGCGTACCGCTGCCTCGTCAGGGAGGACGACCGCGAGGCGCCCAGCTTCCTGTTTGAGTCCGTCGAGCAGGGATCCGAGGGCACCAATGTGGGGAGGTACAGTGTGGTTGGGGCACAGCCTGCGATGGAGATCGTAGCCAAGGCCAACCATGTGACTGTCATGGATCATAAGATGAAGTCTAGGAGGGAGCAATTTGCGCCTGACCCGATGAAGATACCAAGGAGCATTATGGAACAGTGGAACCCACAGATTGTTGAAGGCCTCCCTGATGCATTTTGTGGAGGATGGGTTGGATTCTTCTCTTACGACACAGTGCGTTATGTTGAAACAAAGAAGCTTCCATTTTCTAACGCGCCAGAGGATGATAGGAACCTTCCTGACATCCATTTAGGCCTCTACAATGACATAGTTGTGTTTGATCATGTTGAAAAGAAAACACATGTTATACATTGGGTGAGGGTAGATTGCCATGAGTCAGTTGACGAAGCGTATGAGGACGGGAAGAATCAGCTGGAAGCTTTGTTATCAAGATTACATAGTGTTAATGTGCCAACTCTTACTGCTGGTTCTGTAAAACTTAACGTTGGGCAATTTGGGTCAGCACTACAGAAATCATCAATGTCAAGGGAGGACTATAAGAAAGCTGTTGTTCAAGCAAAAGAGCACATTCTAGCTGGTGACATTTTTCAAGTAGTCTTAAGCCAGCGTTTTGAGAGGCGGACATTTGCTGACCCCTTTGAGGTGTACCGTGCATTGCGTATTGTCAATCCTAGTCCTTATATGGCCTATCTACAGGCTCGTGGTTGTATTCTGGTAGCATCAAGTCCTGAAATTCTTACCCGGGTGGAAAAGAGGACAATTGTTAACAGGCCACTTGCTGGAACAATTAGAAGAGGAAAATCGAAAGCAGAAGACAAAGTTTTAGAACAACTGCTGTTGAGTGATGGAAAGCAGTGTGCTGAGCATATTATGTTAGTAGATCTTGGACGGAATGATGTTGGAAAGGTGTCCAAACCAGGTTCAGTAAAGGTGGAGAAACTGATGAACGTTGAACGATATTCACATGTCATGCACATTAGCTCAACAGTTACTGGAGAGTTGCGTGATGATCTGACTTGTTGGGATGCTCTTCGAGCAGCATTGCCCGTTGGAACAGTTAGTGGTGCACCAAAGGTGAGAGCGATGGAGCTGATTGACCAGATGGAAGGGAAGATGCGTGGGCCGTACAGTGGTGGCTTTGGAGGGGTTTCTTTCCGTGGAGACATGGACATCGCACTTGCTCTCCGTACCATCGTCTTCCCCACGGGATCTCGCTTCGACACCATGTACTCCTACACTGACAAGAATGCTCGTCAGGAGTGGGTGGCTCACCTTCAGGCTGGAGCTGGGATCGTCGCTGACAGCAAGCCTGACGATGAGCATCAGGAGTGCTTGAACAAGGCTGCTGGCCTTGCTCGTGCCATCGATCTTGCCGAGTCTACATTCGTAGATGAGTAGATCATCCAGCTTAGGTTTTCAGATAAAAAAAGATCACCCAGTTTAGGACAGCTTTGTTTTATGTTCTGTTGCTTTCTAGTAGAGCAGAAACCATTCCGGCCCTTGTGCTGTAGGATTTCGCTGCTTTGGATTAAACCATCGTAATAAATTCAATAAATGTATAGCAGATAA] [+] EMBL AK072053 [GCGGCTAACTCAATCCCTTTCTCTGGAGTCTTGGAGCGGCACGGCGGCTGCGCACGCGACCTCGCCCACCACCTGCTCGGCGAAACGCCCGGCTCGGCCGCGACGTGTCCCACCGCACCGCGCGCGCACGCCGCGCCGCGCCCGAGCCCCTCGCCGCCTCCGCGCGGCGCGCCGCGCACCTATTTAAATGCGGCCCCGATCCCGCATTCTCTCAACTGCACTAGTCCCCACCAACGGCTCGGTCCAGTAGAGTTTAT CCCCCACCTATGGCCAGCCTCGTGCTCTCCCTGCGCATCGCGCCG TCCACGCCGCCGCTGGGGCTGGGCGGGGGGCGATTCCGCGGCCGACGAGGGGCCGTCGCCTGCCGCGCCGCCACGTTCCAGCAGCTCGACGCCGTCGCGGTGAGGGAGGAGGAGTCCAAGTTCAAGGCGGGGGCGGCGGAGGGTTGCAACATCCTGCCGCTCAAGCGATGCATCTTCTCCGACCACCTCACGCCGGTGCTCGCGTACCGCTGCCTCGTCAGGGAGGACGACCGCGAGGCGCCCAGCTTCCTGTTTGAGTCCGTCGAGCAGGGATCCGAGGGCACCAATGTGGGGAGGTACAGTGTGGTTGGGGCACAGCCTGCGATGGAGATCGTAGCCAAGGCCAACCATGTGACTGTCATGGATCATAAGATGAAGTCTAGGAGGGAGCAATTTGCGCCTGACCCGATGAAGATACCAAGGAGCATTATGGAACAGTGGAACCCACAGATTGTTGAAGGCCTCCCTGATGCATTTTGTGGAGGATGGGTTGGATTCTTCTCTTACGACACAGTGCGTTATGTTGAAACAAAGAAGCTTCCATTTTCTAACGCGCCAGAGGATGATAGGAACCTTCCTGACATCCATTTAGGCCTCTACAATGACATAGTTGTGTTTGATCATGTTGAAAAGAAAACACATGTTATACATTGGGTGAGGGTAGATTGCCATGAGTCAGTTGACGAAGC ACGAGGACGGGAAGAATCAGCTGGAAGCTTTGTTATCAAGATTACATAGTGTTAATGTGCCAACTCTTACTGCTGGTTCTGTAAAACTTAACGTTGGGCAATTTGGGTCAGCACTACAGAAATCATCAATGTCAAGGGAGGACTATAAGAAAGCTGTTGTTCAAGCAAAAGAGCACATTCTAGCTGGTGACATTTTTCAAGTAGTCTTAAGCCAGCGTTTTGAGAGGCGGACATTTGCTGACCCCTTTGAGGTGTACCGTGCATTGCGTATTGTCAATCCTAGTCCTTATATGGCCTATCTACAGGCTCGTGGTTGTATTCTGGTAGCATCAAGTCCTGAAATTCTTACCCGGGTGGAAAAGAGGACAATTGTTAACAGGCCACTTGCTGGAACAATTAGAAGAGGAAAATCGAAAGCAGAAGACAAAGTTTTAGAACAACTGCTGTTGAGTGATGGAAAGCAGTGTGCTGAGCATATTATGTTAGTAGATCTTGGACGGAATGATGTTGGAAAGGTGTCCAAACCAGGTTCAGTAAAGGTGGAGAAACTGATGAACGTTGAACGATATTCACATGTCATGCACATTAGCTCAACAGTTACTGGAGAGTTGCGTGATGATCTGACTTGTTGGGATGCTCTTCGAGCAGCATTGCCCGTTGGAACAGTTAGTGGTGCACCAAAGGTGAGAGCGATGGAGCTGATTGACCAGATGGAAGGGAAGATGCGTGGGCCGTACAGTGGTGGCTTTGGAGGGGTTTCTTTCCGTGGAGACATGGACATCGCACTTGCTCTCCGTACCATCGTCTTCCCCACGGGATCTCGCTTCGACACCATGTACTCCTACACTGACAAGAATGCTCGTCAGGAGTGGGTGGCTCACCTTCAGGCTGGAGCTGGGATCGTCGCTGACAGCAAGCCTGACGATGAGCATCAGGAGTGCTTGAACAAGGCTGCTGGCCTTGCTCGTGCCATCGATCTTGCCGAGTCTACATTCGTAGATGAGTAGATCATCCAGCTTAGGTTTTCAGATAAAAAAAGATCACCCAGTTTAGGACAGCTTTGTTTTATGTTCTGTTGCTTTCTAGTAGAGCAGAAACCATTCCGGCCCTTGTGCTGTAGGATTTCGCTGCTTTGGATTAAACCATCGTAATAAATTCAATAAATGTATAGCAGAT ] [+] EMBL CB650618 [ GGCTAACCCTATCCCTTTCTCTGGAGTCTTGGAGCGGCACGGCGGCTGCGCACGCGACCTCGCCCACCACCTGCTCGGCGAAACGCCCGGCTCGGCCGCGACGTGTCCCACCGCACCGCGCGCGCACGCCGCGCCGCGCCCGAGCCCCTCGCCGCCTCCGCGCGGCGCGCCGCGCACCTATTTAAATGCGGCCCCGATCCCGCATTCTCTCAACTGCACTAGTCCCCACCAACGGCTCGGTCCAGTAGAGTTTAT CCCCCACCTATGGCCAGCCTCGTGCTCTCCCTGCGCATCGCGCCG TCCACGCCGCCGCTGGGGCTGGGCGGGGGGCGATTCCGCGGCCGACGAGGGGCCGTCGCCTGCCGCGCCGCCACGTTCCAGCAGCTCGACGCCGTCGCGGTGAGGGAGGAGGAGTCCAAGTTCAAGGCGGGGGCGGCGGAGGGTTGCAACATCCTGCCGCTCAAGCGATGCATCTTCTCCGACCACCTCACGCCGGTGCTCGCGTACCGCTGCCTCGTCAGGGAGGACGACCGCGAGGCGCCCAGCTTCCTGTTTGAGTCCGTCGAGCAGGGATCCGAGGGCACCAATGTGGGGAGGTACAGTGTGGTTGGGGCACAGCCTGCGATGGAGATCGTAGCCAAGGCCAACCATGTGACTGTCATGGATCATAAGATGAAGTCTAGGAGGGAGCAATTTGCGCCTGACCCGATGAAGATACCAAGGAGCATTATGGAACAGTGGAACCCACAGATTGTTGAAGGCCTCGCTGATGCATTTTGTGGAGGATGGGTTGGATTCTTCTCTTACGACACAGTGC ] [+] EMBL AB022602 [ CAATCCCTTTCTCTGGAGTCTTGGAGCGGCACGGCGGCTGCGCACGCGACCTCGCCCACCACCTGCTCGGCGAAACG CCGGCTCGGCCGCGACGTGTCCCACCGCACCGCGCGCGCA CGCGCCGCGCCCGAGCCCCTCGCCGCCTCCGCGCGG GCGCCGCAC CCTATTTAAATGCGGCCCCGATCCCGCATTCTCTCAACTGCACTAGTCCCCACCAACGGCTCGGTCCAGTAGAGTTTATCCCCCCCACCTATGGCCAGCCTCGTGCTCTCCCTGCGCATCGC CCGTTCCACGCCGCCGCTGGGGCTGGGCGGGGGGCGATTCCGCGGCCGACGAGGGGCCGTCGCCTGCCGCGCCGCCACGTTCCAGCAGCTCGACGCCGTCGCGGTGAGGGAGGAGGAGTCCAAGTTCAAGGCGGGGGCGGCGGAGGGTTGCAACATCCTGCCGCTCAAGCGATGCATCTTCTCCGACCACCTCACGCCGGTGCTCGCGTACCGCTGCCTCGTCAGGGAGGACGACCGCGAGGCGCCCAGCTTCCTGTTTGAGTCCGTCGAGCAGGGATCCGAGGGCACCAATGTGGGGAGGTACAGTGTGGTTGGGGCACAGCCTGCGATGGAGATCGTAGCCAAGGCCAACCATGTGACTGTCATGGATCATAAGATGAAGTCTAGGAGGGAGCAATTTGCGCCTGACCCGATGAAGATACCAAGGAGCATTATGGAACAGTGGAACCCACAGATTGTTGAAGGCCTCCCTCATGCATTTTGTGGAGGATGGGTTGGATTCTTCTCTTACGACACAGTGCGTTATGTTGAAACAAAGAAGCTTCCATTTTCTAACGCGCCAGAGGATGATAGGAACCTTCCTGACATCCATTTAGGCCTCTACAATGACATAGTTGTGTTTGATCATGTTGAAAAGAAAACACATGTTATACATTGGGTGAGGGTAGATTGCCATGAGTCAGTTGACGAAGCGTATGAGGACGGGAAGAATCAGCTGGAAGCTTTGTTATCAAGATTACATAGTGTTAATGTGCCAACTCTTACTGCTGGTTCTGTAAAACTTAACGTTGGGCAATTTGGGTCAGCACTACAGAAATCATCAATGTCAAGGGAGGACTATAAGAAAGCTGTTGTTCAAGCAAAAGAGCACATTCTAGCTGGTGACATTTTTCAAGTAGTCTTAAGCCAGCGTTTTGAGAGGCGTACATTTGCTGACCCCTTTGAGGTGTACCGTGCATTGCGTATTGTCAATCCTAGTCCTTATATGGCCTATCTACAGGCTCGTGGTTGTATTCTGGTAGCATCAAGTCCTGAAATTCTTACCCGGGTGGAAAAGAGGACAATTGTCAACAGGCCACTTGCTGGAACAATTAGAAGAGGAAAATCGAAAGCAGAAGACAAAGTTTTAGAACAACTGCTGTTGAGTGATGGAAAGCAGTGTGCTGAGCATATTATGTTAGTAGATCTTGGACGGAATGATGTTGGAAAGGTGTCCAAACCAGGTTCAGTAAAGGTGGAGAAACTGATGAACGTTGAACGATATTCACATGTCATGCACATTAGCTCAACAGTTACTGGAGAGTTGCGTGATGATCTGACTTGTTGGGATGCTCTTCGAGCAGCATTGCCCGTTGGAACAGTTAGTGGTGCACCAAAGGTGAGAGCGATGGAGCTGATTGACCAGATGGAAGGGAAGATGCGTGGGCCGTACAGTGGTGGCTTTGGAGGGGTTTCTTTCCGTGGAGACATGGACATCGCACTTGCTCTCCGTACCATCGTCTTCCCCACGGGATCTCGCTTCGACACCATGTACTCCTACACTGACAAGAATGCTCGTCAGGAGTGGGTGGCTCACCTTCAGGCTGGAGCTGGGATCGTCGCTGACAGCAAGCCTGACGATGAGCATCAGGAGTGCTTGAACAAGGCTGCTGGCCTTGCTCGTGCCATCGATCTTGCCGAGTCTACATTCGTAGATGAGTAGATCATCCAGCTTAGGTTTTCAGATAAAAAAAGATCACCCAGTTTAGGACAGCTTTGTTTTATGTTCTGTTGCTTTCTAGTAGAGCAGAAACCATTCCGGCCCTTGTGCTGTAGGATTTCGCTGCTTTGGATTAAACCATCGTAATAAATTCAATAAATGTATAGCAG ] [+] EMBL CA305811 [ TTGGGGCACAGCCTGCGATGGAGATCGTAGCCAAGGCCAACCATGTGACTGTCATGGATCATAAGATGAAGTCTAGGAGGGAGCAATTTGCGCCTGACCCGATGAAGATACCAAGGAGCATTATGGAACAGTGGAACCCACAGATTGTTGAAGGCCTCCCTGATGCATTTTGTGGAGGATGGGTTGGATTCTTCTCTTACGACACAGTGCGTTATGTTGAAACAAAGAAGCCTCCATTTTCTAACGCGCCAGAGGATGATAGGAACCTTCCTGACATCCATTTAGGCCTCTACAATGACATAGTTGTGTTTGATCATGTTGAAAAGAAAACACATGTTATACATTGGGTGAGGGTAGATTGCCATGAGTCAGTTGACGAAGCGTATGAGGACGGGAAGAATCAGCTGGAAGCTTTGTTATCAAGATTACATAGTGTTAATGTGCCAACTCTTACTGCTGGTTCTGTAAAACTTAACGTTGGGCAATTTGGGTCAGCACTACAGAAATCATCAATGTCAAGGGAGGACTATAAGAAAGTTGTTGTTCAAGCAAAAGAGCACATTCTAGCTGGTGACATTTTTCAAGTAGTCTTAAGCCAGCGTTTTGAGAGGCGGACATTTGCTGACCCCTTTGAGGT ] [+] EMBL CB669990 [ TTATGGAACCTTGGAACCCACAGATTGTTGAAGGCCTCCCTGATGCATTTTGTGGAGGATGGGTTGGATTCTTCTCTTACGACACAGTGCGTTATGTTGAAACAAAGAAGCTTCCATTTTCTAACGCGCCAGAGGATGATAGGAACCTTCCTGACATCCATTTAGGCCTCTACAATGACATAGTTGTGTTTGATCATGTTGAAAAGAAAACACATGTTATACATTGGGTGAGGGTAGATTGCCATGAGTCAGTTGACGAAGCATATGAGGACGGGAAGAATCAGCTGGAAGCTTTGTTATCAAGATTACATAGTGTTAATGTGCCAACTCTTACTGCTGGTTCTGTAAAACTTAACGTTGGGCAATTTGGGTCAGCACTACAGAAATCATCAATGTCAAGGGAGGACTATAAGAAAGCTGTTGTTCAAGCAAAAGAGCACATTCTAGCTGGTGACATTTTTCAAGTAGTCTTAAGCCAGCGTTTTGAGAGGCGGACATTTGCTGACCCCTTTGAGGTGTACCGTGCATTGCGTATTGTCAATCCTAGTCCTTATATGGCCTATCTACAGGCTCGTGGTTGTATTCTGGTAGCATCAAGTCCTGAAATTCTTACCCGGGTGGAAAAGAGGACAATTGTTAACAGGCCACTTGCTGGAACAATTAGAAGAGGAAAATCGAAAGCAGAAGACAAAGTTTTAGAACAACTGCTGTTGAGTGATGGAAAGCAGTGTGCTGAGCATATTATGTTAGTAGATCTTGGACGGAATGATGTTGGAAAAGTGTCCAAACCAGGTTCAGTAAAGGTGGAGAAACTGATGAACGTTGAACGATATTCACAT ] [-] EMBL CB650619 [ TCCTGAAATTCTTACCCGGGT GAAAAGAGGACAATTGTTAACAGGCCACTTGCTGGAACAATTAGAAGAGGAAAATCGAAAGCAGAAGACAAAGTTTTAGAACAACTGCTGTTGAGTGATGGAAAGCAGTGTGCTGAGCATATTATGTTAGTAGATCTTGGACGGAATGATGTTGGAAAGGTGTCCAAACCAGGTTCAGTAAAGGTGGAGAAACTGATGAACGTTGAACGATATTCACATGTCATGCACATTAGCTCAACAGTTACTGGAGAGTTGCGTGATGATCTGACTTGTTGGGATGCTCTTCGAGCAGCATTGCCCGTTGGAACAGTTAGTGGTGCACCAAAGGTGAGAGCGATGGAGCTGATTGACCAGATGGAAGGGAAGATGCGTGGGCCGTACAGTGGTGGCTTTGGAGGGGTTTCTTTCCGTGGAGACATGGACATCGCACTTGCTCTCCGTACCATCGTCTTCCCCACGGGATCTCGCTTCGACACCATGTACTCCTACACTGACAAGAATGCTCGTCAGGAGTGGGTGGCTCACCTTCAGGCTGGAGCTGGGATCGTCGCTGACAGCAAGCCTGACGATGAGCATCAGGAGTGCTTGAACAAGGCTGCTGGCCTTGCTCGTGCCATCGATCTTGCCGAGTCTACATTCGTAGATGAGTAGATCATCCAGCTTAGGTTTTCAGATAAAAAAAGATCACCCAGTTTAGGACAGCTTGGTTTTATGTTCTGTTGCTTTCTAGTAGAGCAGAAACCATTCCGGCCCTTGTGCTGTAGGATTTCGCTGCTAGGGATTAAACCATCGTAATAAATTCAATAAATGTATtaaaagaaa] [-] EMBL CB669991 [ GAGGAAAATCGAAAGCAGAAGACAAAGTTTTAGAACAACTGCTGTTGAGTGATGGAAAGCAGTGTGCTGAGCATATTATGTTAGTAGATCTTGGACGGAATGATGTTGGAAAGGTGTCCAAACCAGGTTCAGTAAAGGTGGAGAAACTGATGAACGTTGAACGATATTCACATGTCATGCACATTAGCTCAACAGTTACTGGAGAGTTGCGTGATGATCTGACTTGTTGGGATGCTCTTCGAGCAGCATTGCCCGTTGGAACAGTTAGTGGTGCACCAAAGGTGAGAGCGATGGAGCTGATTGACCAGATGGAAGGGAAGATGCGTGGGCCGTACAGTGGTGGCTTTGGAGGGGTTTCTTTCCGTGGAGACATGGACATCGCACTTGCTCTCCGTACCATCGTCTTCCCCACGGGATCTCGCTTCGACACCATGTACTCCTACACTGACAAGAATGCTCGTCAGGAGTGGGTGGCTCACCTTCAGGCTGGAGCTGGGATCGTCGCTGACAGCAAGCCTGACGATGAGCATCAGGAGTGCTTGAACAAGGCTGCTGGCCTTGCTCGTGCCATCGATCTTGCCGAGTCTACATTCGTAGATGAGTAGATCATCCAGCTTAGGTTTTCAGATAAAAAAAGATCACCCAGTTTAGGACAGCTTTGTTTTATGTTCTGTTGCTTTCTAGTAGAGCAGAAACCATTCCGGCCCTTGTGCTGTAGGATTTCGCTGCTTAAGGTTAAACCATCGTAATAAATTCAATAAATGTAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||