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Oryza sativa
cluster # 10428 cluster # 10428       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10428#0 length = 1804 sequences # 5  
consensus_10428#1 length = 679 sequences # 1  
consensus_10428#2 length = 409 sequences # 1  

consensusID : consensus_10428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1804
fasta sequence
                              [CACCGAGCACGCGGCAGCTACACGCCCCCACGTCGCCGTCGTCCTCCTCCCTCCGCCGCGCCGTCGATCTCCCTCCCCTCCCGGGCCGCCGCCGCCGCGGCGTCCTCCACGCCGCCTGTTGTTCTTGCCTCCTTCCCCGACCGCCACTCTTCTTCAAGAGGTGGCCGTCCGTCGGCGGAGCAGCACGGGAAGTCGACGCCGCTAGCTCCGCCTCCCGTCGATCAGTCGGAGATGGAGCAGGTTCGTGGTGTTGTGCTTCAAAGAAACACGCTGGTGATGTCTGCTGCATAGACAACACATGGAACCATCCGATCTAGTTGATGGATACAAGTTCGG-TGATCAAACTACAAGCGATGTTCGTGTTTGCTTTAAACGGGCCGATGACCAGGCAGAATGGTTTTGCTGCCATTCATCTGTGCTTTCCGGAAATAGCAAGTATTTTGCAGACTGGCTTAGCAGAAATGACATTGGTTCAAACAACTGCATTGGGGTTGACTGTATAAGTGCTGACTATGAACATTATGTCAAGGTGTTGAAGTTAATATATCTTCCTGCAGAATCAATTATAGATTCTTTTGAATCTGTTAGGTCAGCGGTTGGCGTGCTTCGAGCGTCAACACTTCTCAAATGTGAGTTAATTACCAGAAGCTGCATTGAATACCTTGAAGCAGCTTCATGGGATGAAAAAGAGGAGGAAGAGATTTTGGAAGTAGCTCAGAGCCTTGGCTCAGAGGAAGCAGTAGCTCTGTTAGCCCGTCTTCAAGCCCCAAATGTTTCTGCTGTGAAGAATGTCTTCATCTCTGCCATTCGTTTTGCTACGTCCATGGAAAGTCCATCTCCTCCTTTCTTGGATGATCTCAAGACTTCTGCTCAGGAGCAAATTGACTTCATGCTCCATGAGGACGATGACACTGCTTTGGTTACAATGGATGAGGATGTGAGGTCTGTGGTGCGAGAAGGATTGAAAAAACTGTTCTCCACGCTTAAGATTGGACTAGATCTGTTGACCTCGGAGTATGAGCAATTGCCTGAACAGGCAGAACAAAGGGTTCTCTGTAGTTTAGCTGACATTGACTGGATGGCTAATGTCTTGACAAAGATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAATCTCTGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTCTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCAGTATGTTCATTA-CCCTTGTCCAAGTTCACTACTTCTTCCTGACCTGAGAC]

[+] EMBL AK102435             [CACCGAGCACGCGGCAGCTACACGCCCCCACGTCGCCGTCGTCCTCCTCCCTCCGCCGCGCCGTCGATCTCCCTCCCCTCCCGGGCCGCCGCCGCCGCGGCGTCCTCCACGCCGCCTGTTGTTCTTGCCTCCTTCCCCGACCGCCACTCTTCTTCAAGAGGTGGCCGTCCGTCGGCGGAGCAGCACGGGAAGTCGACGCCGCTAGCTCCGCCTCCCGTCGATCAGTCGGAGATGGAGCAGGTTCGTGGTGTTGTGCTTCAAAGAAACACGCTGGTGATGTCTGCTGCATAGACAACACATGGAACCATCCGATCTAGTTGATGGATACAAGTTCGG TGATCAAACTACAAGCGATGTTCGTGTTTGCTTTAAACGGGCCGATGACCAGGCAGAATGGTTTTGCTGCCATTCATCTGTGCTTTCCGGAAATAGCAAGTATTTTGCAGACTGGCTTAGCAGAAATGACATTGGTTCAAACAACTGCATTGGGGTTGACTGTATAAGTGCTGACTATGAACATTATGTCAAGGTGTTGAAGTTAATATATCTTCCTGCAGAATCAATTATAGATTCTTTTGAATCTGTTAGGTCAGCGGTTGGCGTGCTTCGAGCGTCAACACTTCTCAAATGTGAGTTAATTACCAGAAGCTGCATTGAATACCTTGAAGCAGCTTCATGGGATGAAAAAGAGGAGGAAGAGATTTTGGAAGTAGCTCAGAGCCTTGGCTCAGAGGAAGCAGTAGCTCTGTTAGCCCGTCTTCAAGCCCCAAATGTTTCTGCTGTGAAGAATGTCTTCATCTCTGCCATTCGTTTTGCTACGTCCATGGAAAGTCCATCTCCTCCTTTCTTGGATGATCTCAAGACTTCTGCTCAGGAGCAAATTGACTTCATGCTCCATGAGGACGATGACACTGCTTTGGTTACAATGGATGAGGATGTGAGGTCTGTGGTGCGAGAAGGATTGAAAAAACTGTTCTCCACGCTTAAGATTGGACTAGATCTGTTGACCTCGGAGTATGAGCAATTGCCTGAACAGGCAGAACAAAGGGTTCTCTGTAGTTTAGCTGACATTGACTGGATGGCTAATGTCTTGACAAAGATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAATCTCTGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTCTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCAGTATGTTCATTA CCCTTGTCCAAGTTCACTACTTCTTCCTGACCTGAGAC]
[+] EMBL CB643696             [            GGCACCTACACGCCCCCACGTCGCCGTCGGCCTCCTCCCTCCGCCGCGCCGTCGATCTCCCTCCCCTCCCGGGCCGCCGCCGCCGCGGCGTCCTCCACGCCGCCTGTTGTTCTTGCCTCCTTCCCCGACCGCCACTCTTCTTCAAGAGGTGGCCGTCCGTCGGCGGAGCAGCACGGGAAGTCGACGCCGCTAGCTCCGCCTCCCGTCGATCACTCGGAGATGGAGCAGGTTCGTGGTGTTGTGCTTCCAAGAAACACGCTGGTGATGTCTGCTGCATAGACAACACATGGAACCATCCGATCTATTTGATGGATACCAGTTCGGTTGATCTAACTACAAGCGATGTTCGTGTTTGCTTTAAACGGGCCGATGACCAGGCAGAATGGATTTGCTGCCATTCATCTGTGCTTTCCGGAAATAGCAAGTATTTTGCTTACTGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK061998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACAACTGCATTGGGGTTGACTGTATAAGTGCTGACTATGAACATTATGTCAAGGTGTTGAAGTTAATATATCTTCCTGCAGAATCAATTATAGATTCTTTTGAATCTGTTAGGTCAGCGGTTGGCGTGCTTCGAGCGTCAACACTTCTCAAATGTGAGTTAATTACCAGAAGCTGCATTGAATACCTTGAAGCAGCTTCATGGGATGAAAAAGAGGAGGAAGAGATTTTGGAAGTAGCTCAGAGCCTTGGCTCAGAGGAAGCAGTAGCTCTGTTAGCCCGTCTTCAAGCCCCAAATGTTTCTGCTGTGAAGAATGTCTTCATCTCTGCCATTCGTTTTGCTACGTCCATGGAAAGTCCATCTCCTCCTTTCTTGGATGATCTCAAGACTTCTGCTCAGGAGCAAATTGACTTCATGCTCCATGAGGACGATGACACTGCTTTGGTTACAATGGATGAGGATGTGAGGTCTGTGGTGCGAGAAGGATTGAAAAAACTGTTCTCCACGCTTAAGATTGGACTAGATCTGTTGACCTCGGAGTATGAGCAATTGCCTGAACAGGCAGAACAAAGGGTTCTCTGTAGTTTAGCTGACATTGACTGGATGGCTAATGTCTTGACAAAGATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAATCTCTGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTCTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCAGTATGTTCATTA CCCTT                                 ]
[-] EMBL CB643697             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTTTGTCTCTGGTTGGTCAGAAATCTCTGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGTTTGTGGCTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTATGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTATGCGGATGTGGCTTCCATTCATGCAAACAATGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCCCAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGCCATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGTTTTCAGTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGTTAGTAGGAGGGTTAACCGGGAGTGGCAACCCCACAGTCAGCTTGTAATTTTGTAAGGTTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTTCCAAGCAATATACCACCTAGATTTTCATTGTTGTATGTTGTAAAACAACTGTTCATGTGTAATACACTTGAGAAGGGTTGCAGTATGTTCATTA C                                     ]
[+] EMBL CA766412             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTCTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCGGTTCAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTCATTGGTGNATGNTGNAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCAGTATGTTCATTACCCCTTGTCCAAGTTC                       ]


>consensus_10428#0 CACCGAGCACGCGGCAGCTACACGCCCCCACGTCGCCGTCGTCCTCCTCCCTCCGCCGCG CCGTCGATCTCCCTCCCCTCCCGGGCCGCCGCCGCCGCGGCGTCCTCCACGCCGCCTGTT GTTCTTGCCTCCTTCCCCGACCGCCACTCTTCTTCAAGAGGTGGCCGTCCGTCGGCGGAG CAGCACGGGAAGTCGACGCCGCTAGCTCCGCCTCCCGTCGATCAGTCGGAGATGGAGCAG GTTCGTGGTGTTGTGCTTCAAAGAAACACGCTGGTGATGTCTGCTGCATAGACAACACAT GGAACCATCCGATCTAGTTGATGGATACAAGTTCGGTGATCAAACTACAAGCGATGTTCG TGTTTGCTTTAAACGGGCCGATGACCAGGCAGAATGGTTTTGCTGCCATTCATCTGTGCT TTCCGGAAATAGCAAGTATTTTGCAGACTGGCTTAGCAGAAATGACATTGGTTCAAACAA CTGCATTGGGGTTGACTGTATAAGTGCTGACTATGAACATTATGTCAAGGTGTTGAAGTT AATATATCTTCCTGCAGAATCAATTATAGATTCTTTTGAATCTGTTAGGTCAGCGGTTGG CGTGCTTCGAGCGTCAACACTTCTCAAATGTGAGTTAATTACCAGAAGCTGCATTGAATA CCTTGAAGCAGCTTCATGGGATGAAAAAGAGGAGGAAGAGATTTTGGAAGTAGCTCAGAG CCTTGGCTCAGAGGAAGCAGTAGCTCTGTTAGCCCGTCTTCAAGCCCCAAATGTTTCTGC TGTGAAGAATGTCTTCATCTCTGCCATTCGTTTTGCTACGTCCATGGAAAGTCCATCTCC TCCTTTCTTGGATGATCTCAAGACTTCTGCTCAGGAGCAAATTGACTTCATGCTCCATGA GGACGATGACACTGCTTTGGTTACAATGGATGAGGATGTGAGGTCTGTGGTGCGAGAAGG ATTGAAAAAACTGTTCTCCACGCTTAAGATTGGACTAGATCTGTTGACCTCGGAGTATGA GCAATTGCCTGAACAGGCAGAACAAAGGGTTCTCTGTAGTTTAGCTGACATTGACTGGAT GGCTAATGTCTTGACAAAGATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAAT CTCTGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGT AAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGT GGTTTTCCCAGCATCATCCAGAGTTCATTTTCTGCGGATGTGGCTTCCATTCATGCAAAC AACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGA CTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGA TCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCT CACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGG AGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAA TTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAA TATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACT TGAGCTTTCTTGCAGTATGTTCATTACCCTTGTCCAAGTTCACTACTTCTTCCTGACCTG AGAC



consensusID : consensus_10428#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [GATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAATCTCNGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTTTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTTAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACGAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCGGTATGTTCAAAAAAAAAAAAAAA]

[-] EMBL CA763208             [GATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAATCTCNGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGTAAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATCCAGAGTTCATTTTTTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTTAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACGAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCGGTATGTTCAAAAAAAAAAAAAAA]


>consensus_10428#1 GATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAATCTCNGGCTATGTTCTTTC AGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGTAAAAGCAAAACTTATTGA AGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGTGGTTTTCCCAGCATCATC CAGAGTTCATTTTTTGCGGATGTGGCTTCCATTCATGCAAACAACGAAGCGCTTGCTTGA TGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGACTTGTTTCAGAACATTGA GGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGG AGAGTGGATGAAGAATGCAGAGCAGTTTAGATATCCTGATCTCACTGAGGCATTTGAGGT GTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTAGGAGGGCTAAACGGGAGTGG CAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTA GCCTATACGAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTAGATTTTC ATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCGGTAT GTTCAAAAAAAAAAAAAAA



consensusID : consensus_10428#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 409
fasta sequence
                              [GNTTCNGCACGAGATGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTANTAAAACGGCAAAGANGANGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTANATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCAGTATGTTCATTACCCTTGTCCCNNNNAAAAAAAAAA]

[+] EMBL AA752754             [GNTTCNGCACGAGATGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCTCACTGAGGCATTTGAGGTGTGGTGTTACCGTANTAAAACGGCAAAGANGANGCTAGTAGGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAATATACCAACTANATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTTGAGCTTTCTTGCAGTATGTTCATTACCCTTGTCCCNNNNAAAAAAAAAA]


>consensus_10428#2 GNTTCNGCACGAGATGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGTGAT CAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGATCTC ACTGAGGCATTTGAGGTGTGGTGTTACCGTANTAAAACGGCAAAGANGANGCTAGTAGGA GGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATTAAT TTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGCAAT ATACCAACTANATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACACTT GAGCTTTCTTGCAGTATGTTCATTACCCTTGTCCCNNNNAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10428#0      CACCGAGCACGCGGCAGCTACACGCCCCCACGTCGCCGTCGTCCTCCTCCCTCCGCCGCG 60
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CCGTCGATCTCCCTCCCCTCCCGGGCCGCCGCCGCCGCGGCGTCCTCCACGCCGCCTGTT 120
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GTTCTTGCCTCCTTCCCCGACCGCCACTCTTCTTCAAGAGGTGGCCGTCCGTCGGCGGAG 180
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CAGCACGGGAAGTCGACGCCGCTAGCTCCGCCTCCCGTCGATCAGTCGGAGATGGAGCAG 240
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GTTCGTGGTGTTGTGCTTCAAAGAAACACGCTGGTGATGTCTGCTGCATAGACAACACAT 300
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GGAACCATCCGATCTAGTTGATGGATACAAGTTCGGTGATCAAACTACAAGCGATGTTCG 360
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      TGTTTGCTTTAAACGGGCCGATGACCAGGCAGAATGGTTTTGCTGCCATTCATCTGTGCT 420
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      TTCCGGAAATAGCAAGTATTTTGCAGACTGGCTTAGCAGAAATGACATTGGTTCAAACAA 480
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CTGCATTGGGGTTGACTGTATAAGTGCTGACTATGAACATTATGTCAAGGTGTTGAAGTT 540
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      AATATATCTTCCTGCAGAATCAATTATAGATTCTTTTGAATCTGTTAGGTCAGCGGTTGG 600
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CGTGCTTCGAGCGTCAACACTTCTCAAATGTGAGTTAATTACCAGAAGCTGCATTGAATA 660
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CCTTGAAGCAGCTTCATGGGATGAAAAAGAGGAGGAAGAGATTTTGGAAGTAGCTCAGAG 720
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CCTTGGCTCAGAGGAAGCAGTAGCTCTGTTAGCCCGTCTTCAAGCCCCAAATGTTTCTGC 780
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      TGTGAAGAATGTCTTCATCTCTGCCATTCGTTTTGCTACGTCCATGGAAAGTCCATCTCC 840
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      TCCTTTCTTGGATGATCTCAAGACTTCTGCTCAGGAGCAAATTGACTTCATGCTCCATGA 900
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GGACGATGACACTGCTTTGGTTACAATGGATGAGGATGTGAGGTCTGTGGTGCGAGAAGG 960
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      ATTGAAAAAACTGTTCTCCACGCTTAAGATTGGACTAGATCTGTTGACCTCGGAGTATGA 1020
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GCAATTGCCTGAACAGGCAGAACAAAGGGTTCTCTGTAGTTTAGCTGACATTGACTGGAT 1080
consensus_10428#1      ------------------------------------------------------------
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GGCTAATGTCTTGACAAAGATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAAT 1140
consensus_10428#1      ------------------GATTGAGATGATGAACGAGTTTGTCTCTGGTTGGTCAGAAAT 42
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CTCTGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGT 1200
consensus_10428#1      CTCNGGCTATGTTCTTTCAGTTGTTCAGGATAAGAAGTATAGCTCAGGATTGTGGCTTGT 102
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      AAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGT 1260
consensus_10428#1      AAAAGCAAAACTTATTGAAGTGACTGGAAAGGCCTTTGATGCTGTTGGCTATGGCTCTGT 162
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      GGTTTTCCCAGCATCATCCAGAGTTCATTTTCTGCGGATGTGGCTTCCATTCATGCAAAC 1320
consensus_10428#1      GGTTTTCCCAGCATCATCCAGAGTTCATTTTTTGCGGATGTGGCTTCCATTCATGCAAAC 222
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      AACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGA 1380
consensus_10428#1      AACGAAGCGCTTGCTTGATGAAAAGTCGAAGGATGATGCGATTCCACAGATGGATGCAGA 282
consensus_10428#2      ------------------------------------------------------------
                                                                                   

consensus_10428#0      CTTGTTTCAGAACAT--TGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGT 1438
consensus_10428#1      CTTGTTTCAGAACAT--TGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGT 340
consensus_10428#2      ---GNTTCNGCACGAGATGAGGGTGCAATAGTCTCATTGGTGTTAGCATTGCCATCAGGT 57
                          * *** * **    *******************************************

consensus_10428#0      GATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGAT 1498
consensus_10428#1      GATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTTAGATATCCTGAT 400
consensus_10428#2      GATCAGGCAGACATTCTTGGAGAGTGGATGAAGAATGCAGAGCAGTTCAGATATCCTGAT 117
                       *********************************************** ************

consensus_10428#0      CTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTA 1558
consensus_10428#1      CTCACTGAGGCATTTGAGGTGTGGTGTTACCGTAGTAAAACGGCAAAGAGGAGGCTAGTA 460
consensus_10428#2      CTCACTGAGGCATTTGAGGTGTGGTGTTACCGTANTAAAACGGCAAAGANGANGCTAGTA 177
                       ********************************** ************** ** *******

consensus_10428#0      GGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATT 1618
consensus_10428#1      GGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATT 520
consensus_10428#2      GGAGGGCTAAACGGGAGTGGCAACCCCACAGTCAGCTTGTAACTTTGTAAGGCTACCATT 237
                       ************************************************************

consensus_10428#0      AATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGC 1678
consensus_10428#1      AATTTTAATCTTTTGTTGTAGCCTATACGAGTCAGTGAAATCAGGTGGTTGGTACCAAGC 580
consensus_10428#2      AATTTTAATCTTTTGTTGTAGCCTATACAAGTCAGTGAAATCAGGTGGTTGGTACCAAGC 297
                       **************************** *******************************

consensus_10428#0      AATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACA 1738
consensus_10428#1      AATATACCAACTAGATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACA 640
consensus_10428#2      AATATACCAACTANATTTTCATTGTTGTATGTTGTAAAACAACTGCTCATGTGTAATACA 357
                       ************* **********************************************

consensus_10428#0      CTTGAGCTTTCTTGCAGTATGTTCATTA----------CCCTTGTCCAAGTTCACTACTT 1788
consensus_10428#1      CTTGAGCTTTCTTGCGGTATGTTCAAAA----------AAAAAAAAAAA----------- 679
consensus_10428#2      CTTGAGCTTTCTTGCAGTATGTTCATTACCCTTGTCCCNNNNAAAAAAAAAA-------- 409
                       *************** *********  *                   **           

consensus_10428#0      CTTCCTGACCTGAGAC 1804
consensus_10428#1      ----------------
consensus_10428#2      ----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)