Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1043 cluster # 1043       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1043#0 length = 2583 sequences # 1  
consensus_1043#1 length = 576 sequences # 1  

consensusID : consensus_1043#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2583
fasta sequence
                              [CACGCGACCTGCCATGTCTGTGCTTCTGCTTCTCTTCTTGCCGCTCGCCGCCGCCCAACCATGGCAAGTATGCCAAGACAGCCGGGGCAAATACACATCAAACAGCACCTACCAAGCCAACATCCAATCGCTGTCGTCCACGCTCCCCGCGAAAGCCGCCGCGCCCAGCACCGGCCTCTTCGCCACCCGCGTCGCCGGAAATGCCCCAGACACCGTGTACGCCCTTGCCTTCTGCCGCGGGGACATCACCAACGCCTCCGCCTGCGCAGGCTGCGTGGCATCCGGTTTCCAGGACGCGCAGCAGCTGTGCCCGTTCAACAAGGCTGCCTCCCTGTACTACGATCTCTGCCTCCTCCGCTTCGCCGATGAAAACTTCCTCGCCACCAACAACAGCGATGTAGTCATGCTGATGAACTCACAGAACTTCACGGCGAGCGTCGGCTCGGTCCGCCTCCTCCTCTTCACGCTGCTGAACGCCACAGCCGAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTCCCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGCGGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGGAAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGACACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACCAACTACTCCGGTCACCGTGTATCCGCAGCCAGCGGGGCCAGGTGGTGCGAGCGCGCCACCACCGCCGCAGCCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTATCACAAGAGTAAGGTGTGGATCGTTGCTATTGTTGCTCCACTACTGGCAATTCTGTTTTGTTTCATGCTTTCCATTGTATGGATCAGAAGAGGTAGAAAAGGAGAGGTAAACATGCAGAACAATATTGCTGCAGTAAATAGGCTGGAAGAAGACGCACTTGTTTGGAGATTGGAAGAGAGGAGTTCAGAGTTCTCTCTTTTTGAATTTTCTGAGTTGCTGGAGGCTACAGACAACTTCGCAGCAGAGAACAGGCTTGGACAAGGAGGCTTTGGCCCTGTATACAAGGGTCAATTGCATGATGGGGTGGAAGTTGCAGTTAAAAGGCTTGCTTCACAATCAGGACAGGGTTTCACTGAGTTCAAAAATGAAGTTGAACTTATAGCTAAACTACAACACACAAATCTTGTTAGGCTGCTGGGATGCTGCATTCAGGGAGAGGAGAAAATATTGGTGTATGAATATTTGCCAAACAAAAGCTTAGATTTCTTTATCTTTGATGTCGACAAAACCAGTTTAATTGACTGGAATAAACGTTGCGGAATAATTGAAGGGATAGCTCAAGGTCTTCTTTACTTGCACAAGCACTCTCGGCTCCGTGTCATACACAGAGACCTTAAAGCCAGCAACATTCTTTTGGACCAGGACATGAATCCTAAAATATCTGATTTTGGGCTAGCAAAAATTTTTAGCTCTAATAATACCGAAGGAAACACAAAGAGGGTGGTGGGAACATATGGTTACATGTCACCAGAGTATGCCTCTGAAGGTATCTACTCGATCAAATCTGATGTGTTTAGCTTTGGTGTTCTTCTTCTTGAGATACTTAGCGGAAAAAGGAATTCTGGTTTCCACCAATACGGAGATTTTCTTAACCTCCTAGGCTATGCATGGCATATGTGGGAAGAAGGGAGATGGCTTGATATAATAGGAGCGTCAATTCCTCAGACGATCCCTACAGAAGGGTTGAGGAAGTACATCAACATTGCGCTTATGTGCGTGCAAGAGAACGCAGATGATCGACCGACCATGTCAGATGTCGTAGCGATGCTAAGTAGCGAGAGTGCGGTTCTTCCTGAACCTAAGCACCCGGCATACTACAACCTAAGGGTATCAAAAGTACAGGGATCTACTAATGTTGTTCAATCAATCAGTGTGAATGATGTAACTATCACTTCCAACCCAGAGGGTAGATAGCTGGTACCTTTGGGTCTCATTTCCAGCTCTCCATATCTCTCGTATAACAGCATCAAGGCATCAATTGTAATAATGAAGGTATGTGGATGCAGTTGTCGTGGCAGCCGATCTCATCCAGTCTTATTTGCAGACAGTGGCGGATCCAGAAAATCGATTCGTTGGTGTTATAACATGTCTATCGGTGTCATAATATGGTAATTATGCTTAGATCATGGTGTTATGACATATGGATAAGCAGTTTTGCTATATGTTTGCCGAAAGTCGTCGGTGTCGCCTGACACCGGTCCTAGTAATGTAGATCCGCCCCTGTTTGCAGAGTTGTTTTCATAGTCAAGTTTCCCTTCCCCTTTATAAGGATAGTTGCTTTTAAGATATTTTGTTTTGAGGCGATGTATCAGGGATTTACTTAATAACTAGAAAGGTAGCCCGCGCACATGCGCGGGCAGCTTCTTATGTAATGTGAGTGAAATTTTATTATGAATATTTATGTGCAGGGT]

[+] EMBL AK064115             [CACGCGACCTGCCATGTCTGTGCTTCTGCTTCTCTTCTTGCCGCTCGCCGCCGCCCAACCATGGCAAGTATGCCAAGACAGCCGGGGCAAATACACATCAAACAGCACCTACCAAGCCAACATCCAATCGCTGTCGTCCACGCTCCCCGCGAAAGCCGCCGCGCCCAGCACCGGCCTCTTCGCCACCCGCGTCGCCGGAAATGCCCCAGACACCGTGTACGCCCTTGCCTTCTGCCGCGGGGACATCACCAACGCCTCCGCCTGCGCAGGCTGCGTGGCATCCGGTTTCCAGGACGCGCAGCAGCTGTGCCCGTTCAACAAGGCTGCCTCCCTGTACTACGATCTCTGCCTCCTCCGCTTCGCCGATGAAAACTTCCTCGCCACCAACAACAGCGATGTAGTCATGCTGATGAACTCACAGAACTTCACGGCGAGCGTCGGCTCGGTCCGCCTCCTCCTCTTCACGCTGCTGAACGCCACAGCCGAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTCCCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGCGGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGGAAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGACACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACCAACTACTCCGGTCACCGTGTATCCGCAGCCAGCGGGGCCAGGTGGTGCGAGCGCGCCACCACCGCCGCAGCCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTATCACAAGAGTAAGGTGTGGATCGTTGCTATTGTTGCTCCACTACTGGCAATTCTGTTTTGTTTCATGCTTTCCATTGTATGGATCAGAAGAGGTAGAAAAGGAGAGGTAAACATGCAGAACAATATTGCTGCAGTAAATAGGCTGGAAGAAGACGCACTTGTTTGGAGATTGGAAGAGAGGAGTTCAGAGTTCTCTCTTTTTGAATTTTCTGAGTTGCTGGAGGCTACAGACAACTTCGCAGCAGAGAACAGGCTTGGACAAGGAGGCTTTGGCCCTGTATACAAGGGTCAATTGCATGATGGGGTGGAAGTTGCAGTTAAAAGGCTTGCTTCACAATCAGGACAGGGTTTCACTGAGTTCAAAAATGAAGTTGAACTTATAGCTAAACTACAACACACAAATCTTGTTAGGCTGCTGGGATGCTGCATTCAGGGAGAGGAGAAAATATTGGTGTATGAATATTTGCCAAACAAAAGCTTAGATTTCTTTATCTTTGATGTCGACAAAACCAGTTTAATTGACTGGAATAAACGTTGCGGAATAATTGAAGGGATAGCTCAAGGTCTTCTTTACTTGCACAAGCACTCTCGGCTCCGTGTCATACACAGAGACCTTAAAGCCAGCAACATTCTTTTGGACCAGGACATGAATCCTAAAATATCTGATTTTGGGCTAGCAAAAATTTTTAGCTCTAATAATACCGAAGGAAACACAAAGAGGGTGGTGGGAACATATGGTTACATGTCACCAGAGTATGCCTCTGAAGGTATCTACTCGATCAAATCTGATGTGTTTAGCTTTGGTGTTCTTCTTCTTGAGATACTTAGCGGAAAAAGGAATTCTGGTTTCCACCAATACGGAGATTTTCTTAACCTCCTAGGCTATGCATGGCATATGTGGGAAGAAGGGAGATGGCTTGATATAATAGGAGCGTCAATTCCTCAGACGATCCCTACAGAAGGGTTGAGGAAGTACATCAACATTGCGCTTATGTGCGTGCAAGAGAACGCAGATGATCGACCGACCATGTCAGATGTCGTAGCGATGCTAAGTAGCGAGAGTGCGGTTCTTCCTGAACCTAAGCACCCGGCATACTACAACCTAAGGGTATCAAAAGTACAGGGATCTACTAATGTTGTTCAATCAATCAGTGTGAATGATGTAACTATCACTTCCAACCCAGAGGGTAGATAGCTGGTACCTTTGGGTCTCATTTCCAGCTCTCCATATCTCTCGTATAACAGCATCAAGGCATCAATTGTAATAATGAAGGTATGTGGATGCAGTTGTCGTGGCAGCCGATCTCATCCAGTCTTATTTGCAGACAGTGGCGGATCCAGAAAATCGATTCGTTGGTGTTATAACATGTCTATCGGTGTCATAATATGGTAATTATGCTTAGATCATGGTGTTATGACATATGGATAAGCAGTTTTGCTATATGTTTGCCGAAAGTCGTCGGTGTCGCCTGACACCGGTCCTAGTAATGTAGATCCGCCCCTGTTTGCAGAGTTGTTTTCATAGTCAAGTTTCCCTTCCCCTTTATAAGGATAGTTGCTTTTAAGATATTTTGTTTTGAGGCGATGTATCAGGGATTTACTTAATAACTAGAAAGGTAGCCCGCGCACATGCGCGGGCAGCTTCTTATGTAATGTGAGTGAAATTTTATTATGAATATTTATGTGCAGGGT]


>consensus_1043#0 CACGCGACCTGCCATGTCTGTGCTTCTGCTTCTCTTCTTGCCGCTCGCCGCCGCCCAACC ATGGCAAGTATGCCAAGACAGCCGGGGCAAATACACATCAAACAGCACCTACCAAGCCAA CATCCAATCGCTGTCGTCCACGCTCCCCGCGAAAGCCGCCGCGCCCAGCACCGGCCTCTT CGCCACCCGCGTCGCCGGAAATGCCCCAGACACCGTGTACGCCCTTGCCTTCTGCCGCGG GGACATCACCAACGCCTCCGCCTGCGCAGGCTGCGTGGCATCCGGTTTCCAGGACGCGCA GCAGCTGTGCCCGTTCAACAAGGCTGCCTCCCTGTACTACGATCTCTGCCTCCTCCGCTT CGCCGATGAAAACTTCCTCGCCACCAACAACAGCGATGTAGTCATGCTGATGAACTCACA GAACTTCACGGCGAGCGTCGGCTCGGTCCGCCTCCTCCTCTTCACGCTGCTGAACGCCAC AGCCGAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTC CCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGC GGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGG AAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGA CACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACC AACTACTCCGGTCACCGTGTATCCGCAGCCAGCGGGGCCAGGTGGTGCGAGCGCGCCACC ACCGCCGCAGCCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTATCACAAGAG TAAGGTGTGGATCGTTGCTATTGTTGCTCCACTACTGGCAATTCTGTTTTGTTTCATGCT TTCCATTGTATGGATCAGAAGAGGTAGAAAAGGAGAGGTAAACATGCAGAACAATATTGC TGCAGTAAATAGGCTGGAAGAAGACGCACTTGTTTGGAGATTGGAAGAGAGGAGTTCAGA GTTCTCTCTTTTTGAATTTTCTGAGTTGCTGGAGGCTACAGACAACTTCGCAGCAGAGAA CAGGCTTGGACAAGGAGGCTTTGGCCCTGTATACAAGGGTCAATTGCATGATGGGGTGGA AGTTGCAGTTAAAAGGCTTGCTTCACAATCAGGACAGGGTTTCACTGAGTTCAAAAATGA AGTTGAACTTATAGCTAAACTACAACACACAAATCTTGTTAGGCTGCTGGGATGCTGCAT TCAGGGAGAGGAGAAAATATTGGTGTATGAATATTTGCCAAACAAAAGCTTAGATTTCTT TATCTTTGATGTCGACAAAACCAGTTTAATTGACTGGAATAAACGTTGCGGAATAATTGA AGGGATAGCTCAAGGTCTTCTTTACTTGCACAAGCACTCTCGGCTCCGTGTCATACACAG AGACCTTAAAGCCAGCAACATTCTTTTGGACCAGGACATGAATCCTAAAATATCTGATTT TGGGCTAGCAAAAATTTTTAGCTCTAATAATACCGAAGGAAACACAAAGAGGGTGGTGGG AACATATGGTTACATGTCACCAGAGTATGCCTCTGAAGGTATCTACTCGATCAAATCTGA TGTGTTTAGCTTTGGTGTTCTTCTTCTTGAGATACTTAGCGGAAAAAGGAATTCTGGTTT CCACCAATACGGAGATTTTCTTAACCTCCTAGGCTATGCATGGCATATGTGGGAAGAAGG GAGATGGCTTGATATAATAGGAGCGTCAATTCCTCAGACGATCCCTACAGAAGGGTTGAG GAAGTACATCAACATTGCGCTTATGTGCGTGCAAGAGAACGCAGATGATCGACCGACCAT GTCAGATGTCGTAGCGATGCTAAGTAGCGAGAGTGCGGTTCTTCCTGAACCTAAGCACCC GGCATACTACAACCTAAGGGTATCAAAAGTACAGGGATCTACTAATGTTGTTCAATCAAT CAGTGTGAATGATGTAACTATCACTTCCAACCCAGAGGGTAGATAGCTGGTACCTTTGGG TCTCATTTCCAGCTCTCCATATCTCTCGTATAACAGCATCAAGGCATCAATTGTAATAAT GAAGGTATGTGGATGCAGTTGTCGTGGCAGCCGATCTCATCCAGTCTTATTTGCAGACAG TGGCGGATCCAGAAAATCGATTCGTTGGTGTTATAACATGTCTATCGGTGTCATAATATG GTAATTATGCTTAGATCATGGTGTTATGACATATGGATAAGCAGTTTTGCTATATGTTTG CCGAAAGTCGTCGGTGTCGCCTGACACCGGTCCTAGTAATGTAGATCCGCCCCTGTTTGC AGAGTTGTTTTCATAGTCAAGTTTCCCTTCCCCTTTATAAGGATAGTTGCTTTTAAGATA TTTTGTTTTGAGGCGATGTATCAGGGATTTACTTAATAACTAGAAAGGTAGCCCGCGCAC ATGCGCGGGCAGCTTCTTATGTAATGTGAGTGAAATTTTATTATGAATATTTATGTGCAG GGT



consensusID : consensus_1043#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 576
fasta sequence
                              [GAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTCCCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGCGGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGGAAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGACACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACCAACTACTCCGGTCACCGTGTATCCGCACNCAGCGGGCCCAGNGTGGGTGGCGAGCGCGCCACCNACCGCCGCAGTCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTGTCAGTCTTGCATGAATAGTGAATACTCTCTCCTTGCAACACGATTACAATTTTGGAATACGGCTCATGTCTTATTGTCATTAATTAGATCACAAGAGTAAGGTGGTGGATCGTTGCTATTGTTGCTCCACTACTGGCAATTCTGGTTTTGTTTCATGCTTTCCAT]

[+] EMBL CF322762             [GAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTCCCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGCGGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGGAAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGACACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACCAACTACTCCGGTCACCGTGTATCCGCACNCAGCGGGCCCAGNGTGGGTGGCGAGCGCGCCACCNACCGCCGCAGTCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTGTCAGTCTTGCATGAATAGTGAATACTCTCTCCTTGCAACACGATTACAATTTTGGAATACGGCTCATGTCTTATTGTCATTAATTAGATCACAAGAGTAAGGTGGTGGATCGTTGCTATTGTTGCTCCACTACTGGCAATTCTGGTTTTGTTTCATGCTTTCCAT]


>consensus_1043#1 GAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTCCCTC CCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGCGGCC TGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGGAAGG ATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGACACG ATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACCAACT ACTCCGGTCACCGTGTATCCGCACNCAGCGGGCCCAGNGTGGGTGGCGAGCGCGCCACCN ACCGCCGCAGTCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTGTCAGTCTTG CATGAATAGTGAATACTCTCTCCTTGCAACACGATTACAATTTTGGAATACGGCTCATGT CTTATTGTCATTAATTAGATCACAAGAGTAAGGTGGTGGATCGTTGCTATTGTTGCTCCA CTACTGGCAATTCTGGTTTTGTTTCATGCTTTCCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1043#0      CACGCGACCTGCCATGTCTGTGCTTCTGCTTCTCTTCTTGCCGCTCGCCGCCGCCCAACC 60
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      ATGGCAAGTATGCCAAGACAGCCGGGGCAAATACACATCAAACAGCACCTACCAAGCCAA 120
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CATCCAATCGCTGTCGTCCACGCTCCCCGCGAAAGCCGCCGCGCCCAGCACCGGCCTCTT 180
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CGCCACCCGCGTCGCCGGAAATGCCCCAGACACCGTGTACGCCCTTGCCTTCTGCCGCGG 240
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      GGACATCACCAACGCCTCCGCCTGCGCAGGCTGCGTGGCATCCGGTTTCCAGGACGCGCA 300
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      GCAGCTGTGCCCGTTCAACAAGGCTGCCTCCCTGTACTACGATCTCTGCCTCCTCCGCTT 360
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CGCCGATGAAAACTTCCTCGCCACCAACAACAGCGATGTAGTCATGCTGATGAACTCACA 420
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      GAACTTCACGGCGAGCGTCGGCTCGGTCCGCCTCCTCCTCTTCACGCTGCTGAACGCCAC 480
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      AGCCGAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTC 540
consensus_1043#1      ----GAGTCGGCAGCGAGCAGCTCGAGGAGGTTCACCACCTCGCGGTTGGACGTCAGCTC 56
                          ********************************************************

consensus_1043#0      CCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGC 600
consensus_1043#1      CCTCCCCACGCTGTACTGCCTTATGCAGTGCACGCCTGACCTGACGGCCGGAGAGTGCGC 116
                      ************************************************************

consensus_1043#0      GGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGG 660
consensus_1043#1      GGCCTGCTTCGAGGATTTCCCGCGGTTGACGCTCCAGTACCTCGACGGTGCGCGAGGCGG 176
                      ************************************************************

consensus_1043#0      AAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGA 720
consensus_1043#1      AAGGATTCTCGCGACACGCTGCACCATGAGGTACGAGATCTACCCGTTCTACTCAGGTGA 236
                      ************************************************************

consensus_1043#0      CACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACC 780
consensus_1043#1      CACGATGCTGCGTATCATCAACTTGGCAACCACGGTGCCCGAGATGAACACCACGGCACC 296
                      ************************************************************

consensus_1043#0      AACTACTCCGGTCACCGTGTATCCGCAGCCAGCGGGGCCAGG-TGGT--GCGAGCGCGCC 837
consensus_1043#1      AACTACTCCGGTCACCGTGTATCCGCACNCAGCGGGCCCAGNGTGGGTGGCGAGCGCGCC 356
                      ***************************  ******* ****  ***   ***********

consensus_1043#0      ACCA-CCGCCGCAGCCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTATCA-- 894
consensus_1043#1      ACCNACCGCCGCAGTCAAACCCCGGCATCCCGGAACAGGCACAGCGCTCGCCCTGTCAGT 416
                      ***  ********* *************************************** ***  

consensus_1043#0      CAAGAGTAAGGTGTGGATCGTTGCTATTGTTGCTCCACTACTGGCAATTCTGTTTTGTTT 954
consensus_1043#1      CTTGCATGAATAGTGAATACT--CTCTCCTTGCAACACGATTA-CAATTTTGGAATACGG 473
                      *  *  * *   *** **  *  ** *  ****  *** * *  ***** **   *    

consensus_1043#0      CATGCTTTCCATTGT-ATGGATCAGAAGAGGTAGAAAAGGAGAGGTAAACATGCAGAACA 1013
consensus_1043#1      CTCATGTCTTATTGTCATTAATTAGATCACAAGAGTAAGGTGGTGGATCGTTGC----TA 529
                      *     *   ***** **  ** ***  *       **** *  * *    ***     *

consensus_1043#0      ATATTGCTGCAGTAAATAGGCTGGAAGAAGACGCACTTGTTTGGAGATTGGAAGAGAGGA 1073
consensus_1043#1      TTGTTGCTCCACTA------CTGGCA-ATTCTGGTTTTGTTTCATGCTTTCCAT------ 576
                       * ***** ** **      **** * *    *   ******   * **   *       

consensus_1043#0      GTTCAGAGTTCTCTCTTTTTGAATTTTCTGAGTTGCTGGAGGCTACAGACAACTTCGCAG 1133
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CAGAGAACAGGCTTGGACAAGGAGGCTTTGGCCCTGTATACAAGGGTCAATTGCATGATG 1193
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      GGGTGGAAGTTGCAGTTAAAAGGCTTGCTTCACAATCAGGACAGGGTTTCACTGAGTTCA 1253
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      AAAATGAAGTTGAACTTATAGCTAAACTACAACACACAAATCTTGTTAGGCTGCTGGGAT 1313
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      GCTGCATTCAGGGAGAGGAGAAAATATTGGTGTATGAATATTTGCCAAACAAAAGCTTAG 1373
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      ATTTCTTTATCTTTGATGTCGACAAAACCAGTTTAATTGACTGGAATAAACGTTGCGGAA 1433
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TAATTGAAGGGATAGCTCAAGGTCTTCTTTACTTGCACAAGCACTCTCGGCTCCGTGTCA 1493
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TACACAGAGACCTTAAAGCCAGCAACATTCTTTTGGACCAGGACATGAATCCTAAAATAT 1553
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CTGATTTTGGGCTAGCAAAAATTTTTAGCTCTAATAATACCGAAGGAAACACAAAGAGGG 1613
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TGGTGGGAACATATGGTTACATGTCACCAGAGTATGCCTCTGAAGGTATCTACTCGATCA 1673
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      AATCTGATGTGTTTAGCTTTGGTGTTCTTCTTCTTGAGATACTTAGCGGAAAAAGGAATT 1733
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CTGGTTTCCACCAATACGGAGATTTTCTTAACCTCCTAGGCTATGCATGGCATATGTGGG 1793
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      AAGAAGGGAGATGGCTTGATATAATAGGAGCGTCAATTCCTCAGACGATCCCTACAGAAG 1853
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      GGTTGAGGAAGTACATCAACATTGCGCTTATGTGCGTGCAAGAGAACGCAGATGATCGAC 1913
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CGACCATGTCAGATGTCGTAGCGATGCTAAGTAGCGAGAGTGCGGTTCTTCCTGAACCTA 1973
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      AGCACCCGGCATACTACAACCTAAGGGTATCAAAAGTACAGGGATCTACTAATGTTGTTC 2033
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      AATCAATCAGTGTGAATGATGTAACTATCACTTCCAACCCAGAGGGTAGATAGCTGGTAC 2093
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CTTTGGGTCTCATTTCCAGCTCTCCATATCTCTCGTATAACAGCATCAAGGCATCAATTG 2153
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TAATAATGAAGGTATGTGGATGCAGTTGTCGTGGCAGCCGATCTCATCCAGTCTTATTTG 2213
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CAGACAGTGGCGGATCCAGAAAATCGATTCGTTGGTGTTATAACATGTCTATCGGTGTCA 2273
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TAATATGGTAATTATGCTTAGATCATGGTGTTATGACATATGGATAAGCAGTTTTGCTAT 2333
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      ATGTTTGCCGAAAGTCGTCGGTGTCGCCTGACACCGGTCCTAGTAATGTAGATCCGCCCC 2393
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TGTTTGCAGAGTTGTTTTCATAGTCAAGTTTCCCTTCCCCTTTATAAGGATAGTTGCTTT 2453
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TAAGATATTTTGTTTTGAGGCGATGTATCAGGGATTTACTTAATAACTAGAAAGGTAGCC 2513
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      CGCGCACATGCGCGGGCAGCTTCTTATGTAATGTGAGTGAAATTTTATTATGAATATTTA 2573
consensus_1043#1      ------------------------------------------------------------
                                                                                  

consensus_1043#0      TGTGCAGGGT 2583
consensus_1043#1      ----------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)