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Oryza sativa
cluster # 10431 cluster # 10431       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10431#0 length = 2588 sequences # 6  
consensus_10431#1 length = 679 sequences # 1  

consensusID : consensus_10431#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2588
fasta sequence
                              [GCGCACTTCGAAACCCCTCCTAAACCACGCGTGACCCAATCGCAATGGCGACGCCGCCGGAATCCCTCTCACCGGCTGCAGCGGCGGTGGAGGATGATTGGGAGGAGGCGCGGGGGCTGCTGTACGAGGCCTACAACGAGCTGCAGGGCCTGGCGGCGGAGCTGGGCGGCGCGGCGGCGCCCGCGCCAGCGGTGGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAGGCGCTGATGGGGTTCCAGTTCAACCACGTCGGCGGAGGCACCAAGACGCGCCGCCCCGTCGCGCTCCACCTCCGCTTCAACCCGCGCTGCCACGCCCCGCGCTGCCGCCTCCTCGCCGGCTCGGGCGCGGGGGACGACGAGGACGAAGAGGCCGGTGTCGCCGGCCGCGCAATGCCGCTCGCCGACATCCAGGCATACATAGAAGCCGAAAACATGAGGCTGGAGAATGATCCTTCCCAATTTTCAGAAAAAGAAATTATAATAAGGATAGAATACAAGCATTGCCCTAATCTCACCATTATTGACACTCCAGGCCTCATCCTACCAGCTCCTGGCCGTAAAAACCGAGTTTTGCAGAGCCAAGCTTGTGCTGTAGAGACCCTTGTTCGTGCGAAAATAAAGCATAAGGAAACCATAATACTTTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGGAGAGTGGTGATGCAGGTTGATCCTGATCTTGCAAGGACTGTTCTAGTCTCCACAAAACTGGACACTAAAATTTTACAGTTTGCACGAGCCTCTGATGTTGAAGTCTTTCTTCACCCCCCGACCTGTGCTCTAGATGGTTCCTTACTGGGGGATTATCCCTTTTTCACATCAGTGCCTTCGGGGAGAGTTGGCTCCTGCCATGAAGCTGTATTCAGATCAAATGAAGAGTTCAAGAAGGCCATCTCATTGAGAGAGTTGGAAGATGTCGCATCTCTTGAGGACAAGTTGGGAAGGGGACTTACAAAGGAGGAGAAAAACAGAATAGGAGTGAGTAACTTGAGACTATTTTTGGAAGAATTGCTGAGGAAGAGGTACATTGAGAGTGTTCCATTAATTATTCCACTTCTTGAGAAGGAACATCGTGGTGCAACAAGGAAGCTGCGTGAAGTCAATCAAGAAATCAGTGATTTGGATGAAGCAAAAATGAAGGAGAAAGCTCGCCTGTTCCATGATTCATTCTTGTCGAAGTTATCTTTGCTATTGAAAGGCATGGTGGTGGCACCGCCTGATAGATTTGGAGAAACTTTAATTAACGAGAGGATAAATGGAGGAACTTTTACTGGAAGTGAGAATTTCCTGATCCCAAACAAATTGATGCCTAATGCTGGAATGCGTCTCTACGGTGGCGCACAATACCATCGGGCAATGGCTGAATTTCGTCTGGTTGTTGGAAGTATTAGATGCCCTCCAATTACTAGGGAGGAAATTGTCAATGCTTGTGGTGTGGAAGATATTCATGATGGGACAAACTACTCCAGGACTGCTTGTGTGTTAGCTGTGGCAAAAGCACGTGACACATTTGAGCCTTATCTTCACCAGCTGGGTTTTAGGTTATTATACATAATGAAGAGACTGATTCCGATATCTGCTTTTCTGTTGGAGAAAGATGGTGAGAACTGTAGCAGCCATGATGTACTTGTGAAGCGTGTCAAAGCTGCATTTGATAGGTTTGCTGAATCTACTGAGCAATCATGTCGTGAAAGATGTATGGAGGATTTGGTGAGCACCACTCGTTATGTCACTTGGTCCCTTCACAATAAGAACCGTGCCGGATTGAGACACTTCTTTGATTCCTTTGTTGCACAAGAGCAATTATCCGTGAACACACTTACTGCCCACTCGACTGGGCTGCATGAGCAATCCTTTGGCTTGAATGACAATAAGCAGGATAGGCCAAAGGGAGACTTCAAATCAAGTAATTCTTCAGAAGCAAATTCACCCACTGTTGCATCAGAGACTAGGCTT-GTTGATCTCTTGGACAGCACA-CTATGGAACAGAAGGCTGGCACCCTCATCTGAAAGACTTGTGTA-TGCACTGGTTCACCA-GAT-TT-TCCATGGGATCA-AAGAGCAT-TTTCTTGTCACCA-CA-GAGCTTAAGTTCA-ATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCGCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCA-CTTGGGCA-GAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAA-CA-AGAAGCTGAATTCTCTCCA-GGTTAGACA-GTAAGCTACTCTAGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAATAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCA-TG-TGTAAATATACATATATTAACCCTTCCAATGTCGTTTCCCTTCCTTGCAAACCGACTAACAAAGACTTTTTACCGTGATG]

[+] EMBL AK072318             [GCGCACTTCGAAACCCCTCCTAAACCACGCGTGACCCAATCGCAATGGCGACGCCGCCGGAATCCCTCTCACCGGCTGCAGCGGCGGTGGAGGATGATTGGGAGGAGGCGCGGGGGCTGCTGTACGAGGCCTACAACGAGCTGCAGGGCCTGGCGGCGGAGCTGGGCGGCGCGGCGGCGCCCGCGCCAGCGGTGGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAGGCGCTGATGGGGTTCCAGTTCAACCACGTCGGCGGAGGCACCAAGACGCGCCGCCCCGTCGCGCTCCACCTCCGCTTCAACCCGCGCTGCCACGCCCCGCGCTGCCGCCTCCTCGCCGGCTCGGGCGCGGGGGACGACGAGGACGAAGAGGCCGGTGTCGCCGGCCGCGCAATGCCGCTCGCCGACATCCAGGCATACATAGAAGCCGAAAACATGAGGCTGGAGAATGATCCTTCCCAATTTTCAGAAAAAGAAATTATAATAAGGATAGAATACAAGCATTGCCCTAATCTCACCATTATTGACACTCCAGGCCTCATCCTACCAGCTCCTGGCCGTAAAAACCGAGTTTTGCAGAGCCAAGCTTGTGCTGTAGAGACCCTTGTTCGTGCGAAAATAAAGCATAAGGAAACCATAATACTTTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGGAGAGTGGTGATGCAGGTTGATCCTGATCTTGCAAGGACTGTTCTAGTCTCCACAAAACTGGACACTAAAATTTTACAGTTTGCACGAGCCTCTGATGTTGAAGTCTTTCTTCACCCCCCGACCTGTGCTCTAGATGGTTCCTTACTGGGGGATTATCCCTTTTTCACATCAGTGCCTTCGGGGAGAGTTGGCTCCTGCCATGAAGCTGTATTCAGATCAAATGAAGAGTTCAAGAAGGCCATCTCATTGAGAGAGTTGGAAGATGTCGCATCTCTTGAGGACAAGTTGGGAAGGGGACTTACAAAGGAGGAGAAAAACAGAATAGGAGTGAGTAACTTGAGACTATTTTTGGAAGAATTGCTGAGGAAGAGGTACATTGAGAGTGTTCCATTAATTATTCCACTTCTTGAGAAGGAACATCGTGGTGCAACAAGGAAGCTGCGTGAAGTCAATCAAGAAATCAGTGATTTGGATGAAGCAAAAATGAAGGAGAAAGCTCGCCTGTTCCATGATTCATTCTTGTCGAAGTTATCTTTGCTATTGAAAGGCATGGTGGTGGCACCGCCTGATAGATTTGGAGAAACTTTAATTAACGAGAGGATAAATGGAGGAACTTTTACTGGAAGTGAGAATTTCCTGATCCCAAACAAATTGATGCCTAATGCTGGAATGCGTCTCTACGGTGGCGCACAATACCATCGGGCAATGGCTGAATTTCGTCTGGTTGTTGGAAGTATTAGATGCCCTCCAATTACTAGGGAGGAAATTGTCAATGCTTGTGGTGTGGAAGATATTCATGATGGGACAAACTACTCCAGGACTGCTTGTGTGTTAGCTGTGGCAAAAGCACGTGACACATTTGAGCCTTATCTTCACCAGCTGGGTTTTAGGTTATTATACATAATGAAGAGACTGATTCCGATATCTGCTTTTCTGTTGGAGAAAGATGGTGAGAACTGTAGCAGCCATGATGTACTTGTGAAGCGTGTCAAAGCTGCATTTGATAGGTTTGCTGAATCTACTGAGCAATCATGTCGTGAAAGATGTATGGAGGATTTGGTGAGCACCACTCGTTATGTCACTTGGTCCCTTCACAATAAGAACCGTGCCGGATTGAGACACTTCTTTGATTCCTTTGTTGCACAAGAGCAATTATCCGTGAACACACTTACTGCCCACTCGACTGGGCTGCATGAGCAATCCTTTGGCTTGAATGACAATAAGCAGGATAGGCCAAAGGGAGACTTCAAATCAAGTAATTCTTCAGAAGCAAATTCACCCACTGTTGCATCAGAGACTAGGCTT GTTGATCTCTTGGACAGCACA CTATGGAACAGAAGGCTGGCACCCTCATCTGAAAGACTTGTGTA TGCACTGGTTCACCA GAT TT TCCATGGGATCA AAGAGCAT TTTCTTGTCACCA CA GAGCTTAAGTTCA ATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCGCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCA CTTGGGCA GAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAA CA AGAAGCTGAATTCTCTCCA GGTTAGACA GTAAGCTACTCTAGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAATAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCA TG TGTAAATATACATATATTAACCCTTCCAA                                                   ]
[-] EMBL CB634962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGGATTTGGTGAGCACCACTCGTTATGTCACTTGGTCCCTTCACAATAAGAACCGTGCCGGATTGAGACACTTCTTTGATTCCTTTGTTGCACAAGAGCAATTATCCGTGAACACACTTACTGCCCACTCGACTGGGCTGCATGAGCAATCCTTTGGCTTGAATGACAATAAGCAGGATAGGCCAAAGGGAGACTTCAAATCAAGTAATTCTTCAGAAGCAAATTCACCCACTGTTGCATCAGAGACTAGGCTT GTTGATCTCTTGGACAGCACA CTATGGAACAGAAGGCTGGCACCCTCATCTGAAAGACTTGTGTA TGCACTGGTTCACCA GAT TT TCCATGGGATCA AAGAGCAT TTTCTTGTCACCA CA GAGCTTAAGTTCA ATTGCTTTCTCCTCATGCCGATTGTTGACAAGTTACCGGCGCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCA CTTGGGCA GAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAA CA AGAAGCTGAATTCTCTCCA GGTTAGACA GTAAGCTACTCTAGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAATAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCA TG TGTAAATATACATATATGAACCCTTCCAATGTCGTTTCCCTTCCTTGCAAAaaaaaag                      ]
[+] EMBL CA765102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATCTAGTAATTCTTCAGAA TNAATTCACCCACTGTTGCATCAGAGACTAGGCTT GTTGATCTCTTGGACAGCACA CTATGGAACAGAAGGCTGGCACCCTCATCTGAAAGACTTGTATA TGCACTGGTTCACCANGAT TT TCCATGGGATCA AAGAGCAT TTTCTTGTCACCA CANGAGCTTAAGTTCA ATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCTCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCA CTTGGGCA GAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAA CA AGAAGCTGAATTCTCTCCA GGTTAGACA GTAAGCTACTCTAGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAGTAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCA TG TGTAAATATACATATATTAACCCTCCCAATGTTGTTT CCTTCCTTGCAAACCGACTAACAAAGACTTTTTACCGTGATG]
[+] EMBL BM421752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCATCAGAGACTAGGCTTGGTTGATCTCTTGGACAGCACACCTATGGAACAGAAGGCTGGCACCCTCATCTGAAAGACTTGTATA TGCACTGGTTCACCA GAT TT TCCATGGGATCACAAGAGCAT TTTCTTGTCACCACCA GAGCTTAAGTTCA ATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCTCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCA CTTGGGCACGAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAACCANAGAAGCTGAATTCTCTCCACGGTTAGACA GTAAGCTACTCTAGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTCTAT CT TAGTAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCA TGCTGTAAATATACATATATTAACCCTCCCAAaaaa                                               ]
[+] EMBL BM421838             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATCTCTTGGACAGCACA CTATGGAACAGAAGGCTGGCACCCTCATCTGAAAGACTTGTATAGTGCACTGGTTCACCA GATGTTNTCCATGGGATCA AAGAGCATGTTTCTTGTCACCA CA GAGCTTAAGTTCAGATTGCTTTCTCCTCATGCCGATTGTTGACCAATTACCGGCTCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCA CTGCGCCATTCACCTTGGGCACGAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCCAACGCTTAAAGGAGAAATTCGCAGAGATAAA CC AGAAGCTGAATTCTCTCCA GGTTAGACACGTAAGCTACTCTAGGAGAAGCAGAGC ACTAGCTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAGTAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCACCN TGTAAATATACATATATTAACCCTCCCAAaa                                                 ]
[-] EMBL CF324917             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTA TGCACTGGTTCACCA GAT TT TCCATGGGATCA AAGAGCAT TTTCTTGTCACCA CA GAGCTTAAGTTCA ATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCGCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATGATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCA CTTGGGCA GAGGAAGAGAGATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAA CA AGAAGCTGAATTCTCTCCA GGTTAGACA GTAAGCTACTCTAGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAATAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCA TG TGTAAATATACATATATTAACCCTTCCAATGTCGTTTCCCTTCCTTGCAAACCGACTAACAAAGAacc            ]


>consensus_10431#0 GCGCACTTCGAAACCCCTCCTAAACCACGCGTGACCCAATCGCAATGGCGACGCCGCCGG AATCCCTCTCACCGGCTGCAGCGGCGGTGGAGGATGATTGGGAGGAGGCGCGGGGGCTGC TGTACGAGGCCTACAACGAGCTGCAGGGCCTGGCGGCGGAGCTGGGCGGCGCGGCGGCGC CCGCGCCAGCGGTGGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAGG CGCTGATGGGGTTCCAGTTCAACCACGTCGGCGGAGGCACCAAGACGCGCCGCCCCGTCG CGCTCCACCTCCGCTTCAACCCGCGCTGCCACGCCCCGCGCTGCCGCCTCCTCGCCGGCT CGGGCGCGGGGGACGACGAGGACGAAGAGGCCGGTGTCGCCGGCCGCGCAATGCCGCTCG CCGACATCCAGGCATACATAGAAGCCGAAAACATGAGGCTGGAGAATGATCCTTCCCAAT TTTCAGAAAAAGAAATTATAATAAGGATAGAATACAAGCATTGCCCTAATCTCACCATTA TTGACACTCCAGGCCTCATCCTACCAGCTCCTGGCCGTAAAAACCGAGTTTTGCAGAGCC AAGCTTGTGCTGTAGAGACCCTTGTTCGTGCGAAAATAAAGCATAAGGAAACCATAATAC TTTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGGAGAGTGGTGATGCAGG TTGATCCTGATCTTGCAAGGACTGTTCTAGTCTCCACAAAACTGGACACTAAAATTTTAC AGTTTGCACGAGCCTCTGATGTTGAAGTCTTTCTTCACCCCCCGACCTGTGCTCTAGATG GTTCCTTACTGGGGGATTATCCCTTTTTCACATCAGTGCCTTCGGGGAGAGTTGGCTCCT GCCATGAAGCTGTATTCAGATCAAATGAAGAGTTCAAGAAGGCCATCTCATTGAGAGAGT TGGAAGATGTCGCATCTCTTGAGGACAAGTTGGGAAGGGGACTTACAAAGGAGGAGAAAA ACAGAATAGGAGTGAGTAACTTGAGACTATTTTTGGAAGAATTGCTGAGGAAGAGGTACA TTGAGAGTGTTCCATTAATTATTCCACTTCTTGAGAAGGAACATCGTGGTGCAACAAGGA AGCTGCGTGAAGTCAATCAAGAAATCAGTGATTTGGATGAAGCAAAAATGAAGGAGAAAG CTCGCCTGTTCCATGATTCATTCTTGTCGAAGTTATCTTTGCTATTGAAAGGCATGGTGG TGGCACCGCCTGATAGATTTGGAGAAACTTTAATTAACGAGAGGATAAATGGAGGAACTT TTACTGGAAGTGAGAATTTCCTGATCCCAAACAAATTGATGCCTAATGCTGGAATGCGTC TCTACGGTGGCGCACAATACCATCGGGCAATGGCTGAATTTCGTCTGGTTGTTGGAAGTA TTAGATGCCCTCCAATTACTAGGGAGGAAATTGTCAATGCTTGTGGTGTGGAAGATATTC ATGATGGGACAAACTACTCCAGGACTGCTTGTGTGTTAGCTGTGGCAAAAGCACGTGACA CATTTGAGCCTTATCTTCACCAGCTGGGTTTTAGGTTATTATACATAATGAAGAGACTGA TTCCGATATCTGCTTTTCTGTTGGAGAAAGATGGTGAGAACTGTAGCAGCCATGATGTAC TTGTGAAGCGTGTCAAAGCTGCATTTGATAGGTTTGCTGAATCTACTGAGCAATCATGTC GTGAAAGATGTATGGAGGATTTGGTGAGCACCACTCGTTATGTCACTTGGTCCCTTCACA ATAAGAACCGTGCCGGATTGAGACACTTCTTTGATTCCTTTGTTGCACAAGAGCAATTAT CCGTGAACACACTTACTGCCCACTCGACTGGGCTGCATGAGCAATCCTTTGGCTTGAATG ACAATAAGCAGGATAGGCCAAAGGGAGACTTCAAATCAAGTAATTCTTCAGAAGCAAATT CACCCACTGTTGCATCAGAGACTAGGCTTGTTGATCTCTTGGACAGCACACTATGGAACA GAAGGCTGGCACCCTCATCTGAAAGACTTGTGTATGCACTGGTTCACCAGATTTTCCATG GGATCAAAGAGCATTTTCTTGTCACCACAGAGCTTAAGTTCAATTGCTTTCTCCTCATGC CGATTGTTGACAAATTACCGGCGCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGATG ATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCACTTGGGCAGAGGAAGAGAG ATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAACA AGAAGCTGAATTCTCTCCAGGTTAGACAGTAAGCTACTCTAGGAGAAGCAGAGCAACTAG CTACTCTAGTCGAGTTAGATTATTTCTATGCTGTAATAATAATAATCCCTTAGTGTGTAA TAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCATGTGTAAATATACA TATATTAACCCTTCCAATGTCGTTTCCCTTCCTTGCAAACCGACTAACAAAGACTTTTTA CCGTGATG



consensusID : consensus_10431#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [GTGAGCCAGGGCGAGACAAAGGGAGACTTCAAATCTAGTAATTCTTCAGAATCAAATTCACCCACTGTTGCATCAGAGACTAGGCTTGTTGATCTCTTGGACAGCACACTATGGAACAGAAGGCTGGCACCCTCATTTGAAAGACTTGTATATGCACTGGTTCACCAGATTTTCCATGGGATCAAAGAGCATTTTCTTGTCACCACAGAGCTTAAGTTCAATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCTTTTTTAAGAGAAGACCTTGAATCAGCCTTTGAAGATGATCTTGACAGCATATTTGATGTTACTTAGGTGCGCCATTCACTTGGGCAGAGGAAGAGAGATTTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATCCGCAGAGATAAACAAGAAGCTGAATTCTCTCCAGGTTAGACAGTTAGCTACTTTTGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTTTTATGCCGTAGTAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCATGTGTAAATATACATATATTAACCCTCCCCAATGTTGTTTCCTTCCTTGCAAACCGACTAACAAAGAACTTTTTCGTGAAAAAAAAAAAAAAAA]

[-] EMBL CA762250             [GTGAGCCAGGGCGAGACAAAGGGAGACTTCAAATCTAGTAATTCTTCAGAATCAAATTCACCCACTGTTGCATCAGAGACTAGGCTTGTTGATCTCTTGGACAGCACACTATGGAACAGAAGGCTGGCACCCTCATTTGAAAGACTTGTATATGCACTGGTTCACCAGATTTTCCATGGGATCAAAGAGCATTTTCTTGTCACCACAGAGCTTAAGTTCAATTGCTTTCTCCTCATGCCGATTGTTGACAAATTACCGGCTTTTTTAAGAGAAGACCTTGAATCAGCCTTTGAAGATGATCTTGACAGCATATTTGATGTTACTTAGGTGCGCCATTCACTTGGGCAGAGGAAGAGAGATTTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATCCGCAGAGATAAACAAGAAGCTGAATTCTCTCCAGGTTAGACAGTTAGCTACTTTTGGAGAAGCAGAGCAACTAGCTACTCTAGTCGAGTTAGATTATTTTTTATGCCGTAGTAATAATAATCCCTTAGTGTGTAATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCATGTGTAAATATACATATATTAACCCTCCCCAATGTTGTTTCCTTCCTTGCAAACCGACTAACAAAGAACTTTTTCGTGAAAAAAAAAAAAAAAA]


>consensus_10431#1 GTGAGCCAGGGCGAGACAAAGGGAGACTTCAAATCTAGTAATTCTTCAGAATCAAATTCA CCCACTGTTGCATCAGAGACTAGGCTTGTTGATCTCTTGGACAGCACACTATGGAACAGA AGGCTGGCACCCTCATTTGAAAGACTTGTATATGCACTGGTTCACCAGATTTTCCATGGG ATCAAAGAGCATTTTCTTGTCACCACAGAGCTTAAGTTCAATTGCTTTCTCCTCATGCCG ATTGTTGACAAATTACCGGCTTTTTTAAGAGAAGACCTTGAATCAGCCTTTGAAGATGAT CTTGACAGCATATTTGATGTTACTTAGGTGCGCCATTCACTTGGGCAGAGGAAGAGAGAT TTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATCCGCAGAGATAAACAAG AAGCTGAATTCTCTCCAGGTTAGACAGTTAGCTACTTTTGGAGAAGCAGAGCAACTAGCT ACTCTAGTCGAGTTAGATTATTTTTTATGCCGTAGTAATAATAATCCCTTAGTGTGTAAT AATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCATGTGTAAATATACAT ATATTAACCCTCCCCAATGTTGTTTCCTTCCTTGCAAACCGACTAACAAAGAACTTTTTC GTGAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10431#0      GCGCACTTCGAAACCCCTCCTAAACCACGCGTGACCCAATCGCAATGGCGACGCCGCCGG 60
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      AATCCCTCTCACCGGCTGCAGCGGCGGTGGAGGATGATTGGGAGGAGGCGCGGGGGCTGC 120
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TGTACGAGGCCTACAACGAGCTGCAGGGCCTGGCGGCGGAGCTGGGCGGCGCGGCGGCGC 180
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CCGCGCCAGCGGTGGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAGG 240
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CGCTGATGGGGTTCCAGTTCAACCACGTCGGCGGAGGCACCAAGACGCGCCGCCCCGTCG 300
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CGCTCCACCTCCGCTTCAACCCGCGCTGCCACGCCCCGCGCTGCCGCCTCCTCGCCGGCT 360
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CGGGCGCGGGGGACGACGAGGACGAAGAGGCCGGTGTCGCCGGCCGCGCAATGCCGCTCG 420
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CCGACATCCAGGCATACATAGAAGCCGAAAACATGAGGCTGGAGAATGATCCTTCCCAAT 480
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTTCAGAAAAAGAAATTATAATAAGGATAGAATACAAGCATTGCCCTAATCTCACCATTA 540
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTGACACTCCAGGCCTCATCCTACCAGCTCCTGGCCGTAAAAACCGAGTTTTGCAGAGCC 600
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      AAGCTTGTGCTGTAGAGACCCTTGTTCGTGCGAAAATAAAGCATAAGGAAACCATAATAC 660
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGGAGAGTGGTGATGCAGG 720
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTGATCCTGATCTTGCAAGGACTGTTCTAGTCTCCACAAAACTGGACACTAAAATTTTAC 780
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      AGTTTGCACGAGCCTCTGATGTTGAAGTCTTTCTTCACCCCCCGACCTGTGCTCTAGATG 840
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      GTTCCTTACTGGGGGATTATCCCTTTTTCACATCAGTGCCTTCGGGGAGAGTTGGCTCCT 900
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      GCCATGAAGCTGTATTCAGATCAAATGAAGAGTTCAAGAAGGCCATCTCATTGAGAGAGT 960
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TGGAAGATGTCGCATCTCTTGAGGACAAGTTGGGAAGGGGACTTACAAAGGAGGAGAAAA 1020
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      ACAGAATAGGAGTGAGTAACTTGAGACTATTTTTGGAAGAATTGCTGAGGAAGAGGTACA 1080
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTGAGAGTGTTCCATTAATTATTCCACTTCTTGAGAAGGAACATCGTGGTGCAACAAGGA 1140
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      AGCTGCGTGAAGTCAATCAAGAAATCAGTGATTTGGATGAAGCAAAAATGAAGGAGAAAG 1200
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CTCGCCTGTTCCATGATTCATTCTTGTCGAAGTTATCTTTGCTATTGAAAGGCATGGTGG 1260
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TGGCACCGCCTGATAGATTTGGAGAAACTTTAATTAACGAGAGGATAAATGGAGGAACTT 1320
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTACTGGAAGTGAGAATTTCCTGATCCCAAACAAATTGATGCCTAATGCTGGAATGCGTC 1380
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TCTACGGTGGCGCACAATACCATCGGGCAATGGCTGAATTTCGTCTGGTTGTTGGAAGTA 1440
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTAGATGCCCTCCAATTACTAGGGAGGAAATTGTCAATGCTTGTGGTGTGGAAGATATTC 1500
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      ATGATGGGACAAACTACTCCAGGACTGCTTGTGTGTTAGCTGTGGCAAAAGCACGTGACA 1560
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CATTTGAGCCTTATCTTCACCAGCTGGGTTTTAGGTTATTATACATAATGAAGAGACTGA 1620
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTCCGATATCTGCTTTTCTGTTGGAGAAAGATGGTGAGAACTGTAGCAGCCATGATGTAC 1680
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      TTGTGAAGCGTGTCAAAGCTGCATTTGATAGGTTTGCTGAATCTACTGAGCAATCATGTC 1740
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      GTGAAAGATGTATGGAGGATTTGGTGAGCACCACTCGTTATGTCACTTGGTCCCTTCACA 1800
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      ATAAGAACCGTGCCGGATTGAGACACTTCTTTGATTCCTTTGTTGCACAAGAGCAATTAT 1860
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      CCGTGAACACACTTACTGCCCACTCGACTGGGCTGCATGAGCAATCCTTTGGCTTGAATG 1920
consensus_10431#1      ------------------------------------------------------------
                                                                                   

consensus_10431#0      ACAATAAGC-AGGATAGGCCAAAGGGAGACTTCAAATCAAGTAATTCTTCAGAAGCAAAT 1979
consensus_10431#1      ---GTGAGCCAGGGCGAGACAAAGGGAGACTTCAAATCTAGTAATTCTTCAGAATCAAAT 57
                           * *** ***    * ******************* *************** *****

consensus_10431#0      TCACCCACTGTTGCATCAGAGACTAGGCTTGTTGATCTCTTGGACAGCACACTATGGAAC 2039
consensus_10431#1      TCACCCACTGTTGCATCAGAGACTAGGCTTGTTGATCTCTTGGACAGCACACTATGGAAC 117
                       ************************************************************

consensus_10431#0      AGAAGGCTGGCACCCTCATCTGAAAGACTTGTGTATGCACTGGTTCACCAGATTTTCCAT 2099
consensus_10431#1      AGAAGGCTGGCACCCTCATTTGAAAGACTTGTATATGCACTGGTTCACCAGATTTTCCAT 177
                       ******************* ************ ***************************

consensus_10431#0      GGGATCAAAGAGCATTTTCTTGTCACCACAGAGCTTAAGTTCAATTGCTTTCTCCTCATG 2159
consensus_10431#1      GGGATCAAAGAGCATTTTCTTGTCACCACAGAGCTTAAGTTCAATTGCTTTCTCCTCATG 237
                       ************************************************************

consensus_10431#0      CCGATTGTTGACAAATTACCGGCGCTTCTAAGAGAAGACCTTGAATCAGCCTTCGAAGAT 2219
consensus_10431#1      CCGATTGTTGACAAATTACCGGCTTTTTTAAGAGAAGACCTTGAATCAGCCTTTGAAGAT 297
                       ***********************  ** ************************* ******

consensus_10431#0      GATCTTGACAGCATATTTGATGTTACTCAGCTGCGCCATTCACTTGGGCAGAGGAAGAGA 2279
consensus_10431#1      GATCTTGACAGCATATTTGATGTTACTTAGGTGCGCCATTCACTTGGGCAGAGGAAGAGA 357
                       *************************** ** *****************************

consensus_10431#0      GATCTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATTCGCAGAGATAAAC 2339
consensus_10431#1      GATTTGGAGATCGAATTGAAGCGGATCAAACGCTTAAAGGAGAAATCCGCAGAGATAAAC 417
                       *** ****************************************** *************

consensus_10431#0      AAGAAGCTGAATTCTCTCCAGGTTAGACAGTAAGCTACTCTAGGAGAAGCAGAGCAACTA 2399
consensus_10431#1      AAGAAGCTGAATTCTCTCCAGGTTAGACAGTTAGCTACTTTTGGAGAAGCAGAGCAACTA 477
                       ******************************* ******* * ******************

consensus_10431#0      GCTACTCTAGTCGAGTTAGATTATTTCT-ATGCTGTAATAATAATAATCCCTTAGTGTGT 2458
consensus_10431#1      GCTACTCTAGTCGAGTTAGATTATTTTTTATGCCGTAGTAATAATAATCCCTTAGTGTGT 537
                       ************************** * **** *** **********************

consensus_10431#0      AATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCATGTGTAAATATA 2518
consensus_10431#1      AATAATAATAGTCTAGTGTGATTATGACTTCTTTGTTGGATCTTTTCATGTGTAAATATA 597
                       ************************************************************

consensus_10431#0      CATATATTAACCCTTCC-AATGTCGTTTCCCTTCCTTGCAAACCGACTAACAAAGACTTT 2577
consensus_10431#1      CATATATTAACCCTCCCCAATGTTGTTTCC-TTCCTTGCAAACCGACTAACAAAGAACTT 656
                       ************** ** ***** ****** *************************  **

consensus_10431#0      TTACCGTGATG------------- 2588
consensus_10431#1      TT-TCGTGAAAAAAAAAAAAAAAA 679
                       **  *****               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)