These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10437#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3705 fasta sequence [CAAGCAAGCGCACGCACGCACGCGCGGCTTTCTCTCTCCTCCCCCTCTCTCTCCCCTTCACCTCCGCACCCAACAATGGCGCAGCCAGAGAAGGTCTCGTAATCCAAAGCGGCCCGCCTCGAATCCCCTCGCGCAGCCGCCGCCGCCGCTCGATCCCCGCGGCGTCGCGCGGGGTCACCGGAGGAGAGCCGCCTAACAAGCCCCTCGCGAGCCCCCTGGGGGTATTCTGCTCCAGCCGGAAGGAATCCGCGGTGGAAGGCCGCCTTCGAACTCGCGGAGAGGAGATTTTACCCGAGGGTTTCGATTCCGAGCTTGGGATGTACGGTCAGGGAGGGAACTTCAATCCGCAGTATCGGCATGCTGCGCCACCGCCGCCGCCGCAGCAAGCTGGGGTAACGGGTGGCTTCCCTCAGCAACCACTACCACCGCCGCCGCCGCGAATGGCACAGTATCCGCAGCCGCCAGCAATGGCGGCGCCGCCGCCTGGACCGTACCAGCACAGGATGCCACTGGTTCAGAACCAGGCCTACCCTTTTGCCCAGATGCATCAGATGCAAATGCTACCTCAGCAGAGGGGTTACGCCCAGATGCCAATGCCAGGGCCGCCATCGCAGCCGCCGCCTCCACAAGCTATGTATCAGGCCCATCCTCAGTATCCCATGCCAGGGTCTCTCCCTCCACCGCCGCCACGGCCACCAAGCTTTGCTCCAGAGAATGCGCTGCCACCATCTAGCCCCCCGCCTCCATCTCCCCCACCACCACCACCGTCTTCTCCACCTCCTGTGCCCCCTTCACCAACCGCTGCCCCCACAACTGGGCAGTCATGGAATTCAGAGCCAGAAAGAAAAGAAGGTGCCACTGCCACAGATGTTGGTCATGATGTCAAAACTGAGAAGGTGACTAATCAGCTAATTGTCTCTGATGACTCGGATATGGATATGGATGCTGACGAGGACTCTCCATCAAGGGAACATGTCAGTCCAATCAATTCTTCACTTGCAACTGCTGAATGTACTGGAAATGTTAACACGCGAAAGCCTGCGTGTGATGTTTCTAACCTTGTCAAGGACAGTGGTGGTAAGGCTAAAACTACAAATGTAACTGATGAAGGTAGGAGCACATTCCAACTAATTCAAGGCTATGCCTCAGATGACAGTGAAGATGAGGATGGTGCTTGTGCTGTCAGCAACCTTGTGCCATTGACTGAAAATAATGAGCCTGTTCATTCAATTGGTACAAATCCTGATATTGGCCATCAACTCCTTACTGAAGCTGCTCCTTGCACTGAGAGAAGTTTGGAGGATCGAGAGCATCAACTCATGAGTAAGAGCAATCCAGTGAAACATGATTCAGATGAACTTGGACATCCAGTCAAAGAAGATTTAAGTGGCAATGATTCTGATAGAGGGCAACAGACTAGAAGACATGGCAGGAGCCAGTGGAAACGAAGCCGTGGCCAGTCACCTCAGGGCAGGAGGAGCTGTAGCCCTCTGTCCCAAAGTTTATCATCTGGAAGGCAAAGCAATTCTCCACTTGCTAAGCGGGCTAATCTACTCGAGAGCAAATCACCAGATGGAGTGGGTCAGACTTTCAGGGCACAACCTGGCGTCAAGCTTGGTATAAGCAAGGATGGATTCTACAACGACAAACATGATTCCCCTGTAAAAGTTGCCACTCCTTTTGATATTCATCCTGCTGGAGGGCACATTTCAGGAGATAGAATATCTGAGCAAGATGGCCTGATGGGAACAAAGAAGTTTAATGGTTCTCCAGATGATATAGATTGTAACGAGAAAACGAATGATGCATCTGTTGGTTCCTTTGGACCACATGGTCATGGTGCAGTTTTAACTTGTGGACCTTCTCAATCAGTTGCTTCTTCTGCAAATGGTTCTGATCCTCATAAGATGCAAAGGTCAGGCCGTGCATCAATACCTCAATCAGACATGGATAAATCATCTCTGGGTGCTCATCAAAGTCTTTCGAGTCAACCTCCAGGAATCTCATTTGCAACAGTACATGCTACTGAGAAGAATATGATGTGTGATGTGCTCCAACCTCATTCTCAGAATTTATGTCCTCCTGGACAGATGCCATCTGGTTTGAGACCAGCTCATATACCATCCTCAAATATAACCCCACTCCCAGGGCAACAGTTACTTTCGACTCCAGAATTTCCTCAGATGCACTTCCAGCCTAATGTTATGGCACCAGCTAATGAGTTTCTGCAGAGTCAGATGCAAACCTATCCTGCACCAGATCTGCCTCATCCTAGGCCATTGGATTTCCATCCTCATACTCTCCAGCCAGTTGTCCCTCCTCATCAGCAGCCTGCTGCCATGGTTCACTCCTCTTTCCAAAGATTCACACCAAATCTACCAGGAAGTACTGAATTTGGTGCTATATCTGATACTGATCTGCCTAAATCATCTATCAAGCCCCACTACAACCCTTTTGCGTCTACCTTTGAACAAACAGATCCGACTCTAAATATTGGCTGTGATGTTATCCCAAATCCAGTTGAGTCTGCTTCAACAAAAGCAGCAGAACACGCGAATGCACTGTCACCTTTTGGTCTGTCGGTTCCTGGATCTGGAACTCATGTGCGTGAGAATTCTGCGGAAGTTGTTTCCAGTCGGCAAAAGCAGCCTCATCGTGAATTCACTTCTAGTGCTCCCTATGATCCACTGCTCGACAGTATTGAACCCTCAAGCAGTTCAATCAACAAAATGGATCTTGGTCGAGAGGCAAATCTGAGTGCTAGCAATCATAATGCATCTAAAATTGTGAACATAGAAGTGGAGAGTAAAAATATGCATGGCCTGGGGCTTGTTGCTGAATCGGAAGTTGAAGAATTTGGAGAGGTGGCAGCAGATACTGAAGCAGGTGTTGTGGATAATTTAAGTCCTGAGCCCTTGGGTGCAAAAGACTGGAGCTCAGATATGCCCGGTGATATTGACAATGATGAATCGGTGGATAAAAATAAGAGGACTAAGGATTCCAGATCAATGAAGCTATTTAAGGTTGCTATTGCAGATTTTGTTAAAGAAGTTCTTAAGCCATCATGGAGGCAGGGAAACATAAGTAGAGAGGCTTTCAAAACCATTGTCAAGAAAACAGTTGATAAGGTTTCTAGTTCTGTCCCTAACAATCATATTCCAAAAACGCCAG-CCAAGATCAAGCAGTAT-GTCCAGTCCTCTCAAAAGAAAGTGACCAAACTTGTAATGGG-CTATGTTGACAAATATGTGAAGCTATA-GTTGGATCAGTAAAT-GGGACTA-TGAACTGGAGCAATC-AGGACAGTGTCC-TTTTCCT-GTTGCAG-AAATCGTGATGGGACTATGGAC-TATG-AACAGCTCACACGAATCTGA-GCTATGC-TATGGTATT--TTGGATCATCAATTTGC-AGTCTTTCAGCAGTAAGGGATTCCGGGTAATAGTTCTGCAGAAATGGATGTATTTATCAGAAAATCACGAGTTTACATTGGAACAA--TTGCTGCCTAGTCTTCATAGCCTTGTAAGATGTATCTTTGCTCCACTGTTTCTTTTTTTCTTTTCTTTTGAGTAGTTTGCTCTACTATTTCACCATCATTAGGCAAGTGATAGTAGAACGTTCTTTAATACTGACTGCATGAAC-GCATTGCTGAAAAGAATTATATTTCTTCAAGGTAAATGTAAATGATTTAATCTTATTGCTAAAAACCAAAAAAAAAA] [+] EMBL AK100534 [CAAGCAAGCGCACGCACGCACGCGCGGCTTTCTCTCTCCTCCCCCTCTCTCTCCCCTTCACCTCCGCACCCAACAATGGCGCAGCCAGAGAAGGTCTCGTAATCCAAAGCGGCCCGCCTCGAATCCCCTCGCGCAGCCGCCGCCGCCGCTCGATCCCCGCGGCGTCGCGCGGGGTCACCGGAGGAGAGCCGCCTAACAAGCCCCTCGCGAGCCCCCTGGGGGTATTCTGCTCCAGCCGGAAGGAATCCGCGGTGGAAGGCCGCCTTCGAACTCGCGGAGAGGAGATTTTACCCGAGGGTTTCGATTCCGAGCTTGGGATGTACGGTCAGGGAGGGAACTTCAATCCGCAGTATCGGCATGCTGCGCCACCGCCGCCGCCGCAGCAAGCTGGGGTAACGGGTGGCTTCCCTCAGCAACCACTACCACCGCCGCCGCCGCGAATGGCACAGTATCCGCAGCCGCCAGCAATGGCGGCGCCGCCGCCTGGACCGTACCAGCACAGGATGCCACTGGTTCAGAACCAGGCCTACCCTTTTGCCCAGATGCATCAGATGCAAATGCTACCTCAGCAGAGGGGTTACGCCCAGATGCCAATGCCAGGGCCGCCATCGCAGCCGCCGCCTCCACAAGCTATGTATCAGGCCCATCCTCAGTATCCCATGCCAGGGTCTCTCCCTCCACCGCCGCCACGGCCACCAAGCTTTGCTCCAGAGAATGCGCTGCCACCATCTAGCCCCCCGCCTCCATCTCCCCCACCACCACCACCGTCTTCTCCACCTCCTGTGCCCCCTTCACCAACCGCTGCCCCCACAACTGGGCAGTCATGGAATTCAGAGCCAGAAAGAAAAGAAGGTGCCACTGCCACAGATGTTGGTCATGATGTCAAAACTGAGAAGGTGACTAATCAGCTAATTGTCTCTGATGACTCGGATATGGATATGGATGCTGACGAGGACTCTCCATCAAGGGAACATGTCAGTCCAATCAATTCTTCACTTGCAACTGCTGAATGTACTGGAAATGTTAACACGCGAAAGCCTGCGTGTGATGTTTCTAACCTTGTCAAGGACAGTGGTGGTAAGGCTAAAACTACAAATGTAACTGATGAAGGTAGGAGCACATTCCAACTAATTCAAGGCTATGCCTCAGATGACAGTGAAGATGAGGATGGTGCTTGTGCTGTCAGCAACCTTGTGCCATTGACTGAAAATAATGAGCCTGTTCATTCAATTGGTACAAATCCTGATATTGGCCATCAACTCCTTACTGAAGCTGCTCCTTGCACTGAGAGAAGTTTGGAGGATCGAGAGCATCAACTCATGAGTAAGAGCAATCCAGTGAAACATGATTCAGATGAACTTGGACATCCAGTCAAAGAAGATTTAAGTGGCAATGATTCTGATAGAGGGCAACAGACTAGAAGACATGGCAGGAGCCAGTGGAAACGAAGCCGTGGCCAGTCACCTCAGGGCAGGAGGAGCTGTAGCCCTCTGTCCCAAAGTTTATCATCTGGAAGGCAAAGCAATTCTCCACTTGCTAAGCGGGCTAATCTACTCGAGAGCAAATCACCAGATGGAGTGGGTCAGACTTTCAGGGCACAACCTGGCGTCAAGCTTGGTATAAGCAAGGATGGATTCTACAACGACAAACATGATTCCCCTGTAAAAGTTGCCACTCCTTTTGATATTCATCCTGCTGGAGGGCACATTTCAGGAGATAGAATATCTGAGCAAGATGGCCTGATGGGAACAAAGAAGTTTAATGGTTCTCCAGATGATATAGATTGTAACGAGAAAACGAATGATGCATCTGTTGGTTCCTTTGGACCACATGGTCATGGTGCAGTTTTAACTTGTGGACCTTCTCAATCAGTTGCTTCTTCTGCAAATGGTTCTGATCCTCATAAGATGCAAAGGTCAGGCCGTGCATCAATACCTCAATCAGACATGGATAAATCATCTCTGGGTGCTCATCAAAGTCTTTCGAGTCAACCTCCAGGAATCTCATTTGCAACAGTACATGCTACTGAGAAGAATATGATGTGTGATGTGCTCCAACCTCATTCTCAGAATTTATGTCCTCCTGGACAGATGCCATCTGGTTTGAGACCAGCTCATATACCATCCTCAAATATAACCCCACTCCCAGGGCAACAGTTACTTTCGACTCCAGAATTTCCTCAGATGCACTTCCAGCCTAATGTTATGGCACCAGCTAATGAGTTTCTGCAGAGTCAGATGCAAACCTATCCTGCACCAGATCTGCCTCATCCTAGGCCATTGGATTTCCATCCTCATACTCTCCAGCCAGTTGTCCCTCCTCATCAGCAGCCTGCTGCCATGGTTCACTCCTCTTTCCAAAGATTCACACCAAATCTACCAGGAAGTACTGAATTTGGTGCTATATCTGATACTGATCTGCCTAAATCATCTATCAAGCCCCACTACAACCCTTTTGCGTCTACCTTTGAACAAACAGATCCGACTCTAAATATTGGCTGTGATGTTATCCCAAATCCAGTTGAGTCTGCTTCAACAAAAGCAGCAGAACACGCGAATGCACTGTCACCTTTTGGTCTGTCGGTTCCTGGATCTGGAACTCATGTGCGTGAGAATTCTGCGGAAGTTGTTTCCAGTCGGCAAAAGCAGCCTCATCGTGAATTCACTTCTAGTGCTCCCTATGATCCACTGCTCGACAGTATTGAACCCTCAAGCAGTTCAATCAACAAAATGGATCTTGGTCGAGAGGCAAATCTGAGTGCTAGCAATCATAATGCATCTAAAATTGTGAACATAGAAGTGGAGAGTAAAAATATGCATGGCCTGGGGCTTGTTGCTGAATCGGAAGTTGAAGAATTTGGAGAGGTGGCAGCAGATACTGAAGCAGGTGTTGTGGATAATTTAAGTCCTGAGCCCTTGGGTGCAAAAGACTGGAGCTCAGATATGCCCGGTGATATTGACAATGATGAATCGGTGGATAAAAATAAGAGGACTAAGGATTCCAGATCAATGAAGCTATTTAAGGTTGCTATTGCAGATTTTGTTAAAGAAGTTCTTAAGCCATCATGGAGGCAGGGAAACATAAGTAGAGAGGCTTTCAAAACCATTGTCAAGAAAACAGTTGATAAGGTTTCTAGTTCTGTCCCTAACAATCATATTCCAAAAACGCCAG CCAAGATCAAGCAGTAT GTCCAGTCCTCTCAAAAGAAAGTGACCAAACTTGTAATGGG CTATGTTGACAAATATGTGAAGCTATA GTTGGATCAGTAAAT GGGACTA TGAACTGGAGCAATC AGGACAGTGTCC TTTTCCT GTTGCAG AAATCGTGATGGGACTATGGAC TATG AACAGCTCACACGAATCTGA GCTATGC TATGGTATT TTGGATCATCAATTTGC AGTCTTTCAGCAGTAAGGGATTCCGGGTAATAGTTCTGCAGAAATGGATGTATTTATCAGAAAATCACGAGTTTACATTGGAACAA TTGCTGCCTAGTCTTCATAGCCTTGTAAGATGTATCTTTGCTCCACTGTTTCTTTTTTTCTTTTCTTTTGAGTAGTTTGCTCTACTATTTCACCATCATTAGGCAAGTGATAGTAGAACGTTCTTTAATACTGACTGCATGAAC GCATTGCTGAAAAGAATT ] [+] EMBL CB672029 [ TTTGGACCACATGGTCATGGTGCAGTTTTAACTTGTGGACCTTCTCAATCAGTTGCTTCTTCTGCAAATGGTTCTGATCCTCATAAGATGCAAAGGTCAGGCCGTGCATCAATACCTCAATCAGACATGGATAAATCATCTCTGGGTGCTCATCAAAGTCTTTCGAGTCAACCTCCAGGAATCTCATTTGCAACAGTACATGCTACTGAGAAGAATATGATGTGTGATGTGCTCCAACCTCATTCTCAGAATTTATGTCCTCCTGGACAGATGCCATCTGGTTTGAGACCAGCTCATATACCATCCTCAAATATAACCCCACTCCCAGGGCAACAGTTACTTTCGACTCCAGAATTTCCTCAGATGCACTTCCAGCCTAATGTTATGGCACCAGCTAATGAGTTTCTGCAGAGTCAGATGCAAACCTATCCTGCACCAGATCTGCCTCATCCTAGGCCATTGGATTTCCATCCTCATACTCTCCAGCCAGTTGTCCCTCCTCATCAGCAGCCTGCTGCCATGGTTCACTCCTCTTTCCAAAGATTCACACCAAATCTACCAGGAAGTACTGAATTTGGTGCTATATCTGATACTGATCTGCCTAAATCATCTATCAAGCCCCACTACAACCCTTTTGCGTCTACCTTTGAACAAACAGATCCGACTCTAAATATTGGCTGTGATGTTATCCCAAATCCAGTTGAGTCTGCTTCAACAAAAGCAGCAGAACACGCGAATGCACTGTCACCTTTTGGTCTGTCGGTTCCTGGATCTGGAACT ] [+] EMBL CB000582 [ GATGTGCTCCAACCTCATTCTCAGAATTTATGTCCTCCTGCACAGATGCCATCTGGTTTGAGACCAGCTCATATACCATCCTCAAATATAACCCCACTCCCAGGGCAACAGTTACTTTCGACTCCAGAATTTCCTCAGATGCACTTCCAGCCTAATGTTATGGCACCAGCTAATGAGTTTCTGCAGAGTCAGATGCAAACCTATCCTGCACCAGATCTGCCTCATCCTAGGCCATTGGATTTCCATCCTCATACTCTCCAGCCAGTTGTCCCTCCTCATCAGCAGCCTGCTGCCATGGTTCACTCCTCTTTCCAAAGATTCACACCAAATCTACCAGGAAGTACTGAATTTGGTGCTATATCTGATACTGATCTGCCTAAATCATCTATCAAGCCCCACTACAACCCTTTTGCGTCTACCTTTGAACAAACAGATCCGACTCTAAATATTGGCTGTGATGTTATCCCAAATCCAGTTGAGTCTGCTTCAACAAAAGCAGCAGAACACGCGAATGCACTGTCACCTTTTGGTCTGTCGGTTCCTGGATCTGGAACTCATGTGCGTGAGAATTCTGCGGAAGTTGTTTCCAGTCGGCAAAAGCAGCCTCATCGTGAATTCACTTCTAGTGCTCCCTATGATCCAC ] [+] EMBL CA767388 [ TGTGCGTGAGAATTCTGCGGAAGTTGTTTCCAGTCGGCAAAAGCAGCCTCATCGTGAATTCACTTCTAGTGCTCCCTATGATCCACTGCTCGACAGTATTGAACCCTCAAGCAGTTCAATCAACAAAATGGATCTTGGTCGAGAGGCAAATCTGAGTGCTAGCAATCATAATGCATCTAAAATTGTGAACATAGAAGTGGAGAGTAAAAATATGCATGGCCTGGGGCTTGTTGCTGAATCGGATGTTGAAGAATTTGGAGAGGTGGCAGCAGATACTGAAGCAGGTGTTGTGGATAATTTAAGTCCTGAGCCCTTGGGTGCAAAAGACTGGAGCTCAGATATGCCCGGTGATATTGACAATGATGAATCGGTGGATAAAAATAAGAGGACTAAGGATTCCAGATCAATGAAGCTATTTAAGGTTGCTATTGCAGATTTTGTTAAAGAAGTTCTTAAGCCATCATGGAGGCAGGGAAACATAAGTAGAGAGGCTTTCAAAACCATTGTCAAGAAAACAGTTGATAAGGTTTCTAGTTCTGTCCCTAACAATCATATTCCAAAAACACCAGCCCAAGATCAAGCAGTATGGTCCAGTCCTCTCAAAAGAAAGTGACCAAGCTTGTAATGGGCCTATGTTGACAAATATGTGAAGCTATAGGTTGGATCAGTAAATGGGGACTATTGAACTGGAGCAATCAAGGACAGNGTCCNTTTTCCTGGTTGCAGAAAATCGNGATGGGATTNTGGACTTTTGAAACAGCTCACACGAATCTGA GCTAT ] [+] EMBL BE229399 [ cgagTCCAGTCGGCAAAAGCAGCCTCATCGTGAATTCACTTCTAGTGCYTCCTATGATCCACTGCTCGACAGTATTGAACCCTCAAGCAGTTCAATCAACAAAATGGATCTTGGTCGAGAGGCAAATCTGAGTGCTAGCAATCATAATGCATCTAAAATTGTGAACATAGAAGTGGAGAGTAAAAATATGCATGGCCTGGGGCTTGTTGCTGAATCGGAAGTTGAAGAATTTGGAGAGGTGGCAGCAGATACTGAAGCAGGTGTTGTGGATAATTTAAGTCCTGAGCCCTTGGGTGCAAAAGACTGGAGCTCAGATATGCCCGGTGATATTGACAATGATGAATCGGTGGATAAAAATAAGAGGACTAAGGATTCCAGATCAATGAAGCTATTTAAGGTTGCTATTGCAGATTTTGTTAAAGAAGTTCTTAAGCCATCATGGAGGCAGGGAAACATAAGTAGAGAGGCTTTCAAAMCCATTGTCAAGAAAACAGTTGATAAGGTTTCTAGTTCTST CCTAACAATCATATTCCAAAAc ] [+] EMBL BI801275 [ TGGAC TATG AACAGCTCACACGAATCTGACGCTATGCTTATGGTATTTGTTGGATCATCAATTTGCAAGTCTTTCA CAGTAAGGGATTCCGGGTAATAGTTCTGCAGAAATGGATGTATTTATCAGAAAATCACGAGTTTACATTGGAACAAATTTGCTGCCTAGTCTTCATAGCCTTGTAAGATGTATCTTTGCTCCACTGTTTCTTTTTTTCTTTTCTTTTGAGTAGTTTGCTCTACTATTTCACCATCATTAGGCAAGTGATAGTAGAACGTTCTTTAATACTGACTGCATGAACAGCATTGCTGAAAAGAATTATATTTCTTCAAGGTAAATGTAAATGATTTAATCTTATTGCTAAAAA ] [+] EMBL BM038971 [ cGTAAGGGATTCCGGGTAATAGTTCT CAGAAATGGATGTATTTATCAGAAAATCACGAGTTTACCTTGGAACCA TTGCTGCCTAGTCTTCATAGCCTTGTAAGATGTATCTTTGCTCCCCTGTTTCTTTTTTTCNTTTCTTTTGAGTAGTTTGCTCTACTATTTCACCATCATTA GCACATGATA TAGAACNTTCTTTAATACTGACTGCATGAAC CCTTGCTGAAAAGAATTATATTTCTTCAAGGTAAATGTAAATGATTTAATCTTATTCCTACCTTCCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||