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Oryza sativa
cluster # 10439 cluster # 10439       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10439#0 length = 1962 sequences # 5  
consensus_10439#1 length = 445 sequences # 1  
consensus_10439#2 length = 279 sequences # 1  

consensusID : consensus_10439#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1962
fasta sequence
                              [CGTTAGCAGTGAGAGTGACAGACGACACATAGAAGGTTTTCATGGAGAAAGTACTGGTGCTCTCCTTGATATGTATTTCACTCTGCCAAGGATGGGTGGTGCAATCTTTAGAATATGATCATACAGCAAGTATTGAGTGCCTTCGCGATCCGATGAAGCCGCTGTACAACGGCGGCATCATCCAGAACGGCGAGTTCAACAGCGGCCTCATGGGCTGGTCCACGCACCGCGACATCAAGGCCGGCCTGAGCAGCTCGCCGTCCGGCAACAAGTTCGCCGTGGTGCAGCGCGCCGACTCCCTCTCCGGCGCCGCCGTGCCGTCGCGCAGCGTCTACCAGAAGATCCAGCTGCAGGGCGACACCCACTACTCGCTGTCCGCGTGGTTGC-AGGTGTCGGCCGGCGCCGCGCACGTGAAGGCGTTCGTCAAGACGCCCAACGGCGAGCGCGTCGTCGCCGGCAGCGTCTCCGCCCAGTCCGGCTGCTGGAGCATGCTCAAGGGCGGCATGACCGCCTACTCCTCCGGCCCAGGGCAGATCTTCTTCGAGAGCGACGCGCCGGTGGACATCTGGATGGACAGCGTGTCGCTGCAGCCGTTCACGTTCGACGAGTGGGACGCGCACCGGCAGCAGTCGGCCGCCAAGGTGCGGAGGAGCACCGTCAGGGTGGTCGTCCGCGGCGCCGACGGCGCGCCCATGGCGAACGCCACGGTGATCGTCGAGCTCCTCCGGGCCGGCTTCCCGTTCGGCAACGCGCTGACCAAGGAGATCCTGGACCTGCCGGCGTACGAGAAGTGGTTCACGTCGCGCTTCACGGTGGCCACGTTCGAGAACGAGATGAAGTGGTACAGCAACGAGTGGGCCCAGAACAACGAGGACTACCGCGTCGCCGACGCCATGCTCAAGCTCGCCCAAAAGTACAACATCAAGATTAGGGGACACAACGTATTCTGGGACGACCAGAACTCGCAGATGAAGTGGGTGACGCCGCTGAACCTGGACCAGCTGAAGGCGGCGATGCAGAAGCGGCTCAAGTCGGTGGTGACGCGGTACGCCGGGAAGGTGATCCACTGGGACGTGGTGAACGAGAACCTGCACTTCAACTTCTTCGAGACCAAGCTGGGGCCGAACGCGTCGCCGATGATCTACAACCAGGTGGGCGCGCTGGACAAGAACGCCATCCTCTTCATGAACGAGTTCAACACGCTGGAGCAGCCCGGTGACCCCAA-CCCGGTGCCCAGC-AAGTACGTCGCC-AAGATGAAGC-AGATCCAGAGCTACCCCGGCAACAGCGCCCTCAAGCTCGGCGTCGGCCTCGAGAGCCACTTCTCCACCCCAAACATCCCTTACATGAGGAGCGCCCTCGACACGTTGGCGCAGCTCAAGCTTCCCATGTGGCTCACCGAGGTCGATGTCGTCAAAGGACCCAACCAGGTGAAGTTCTTGGAGCAGGTGCTGAGGGAAGGGTACGCGCACCCGTCGGTGAACGGGATGATAATGTGGGCGGCGTGGCACGCCAAGGGTTGCTACGTGATGTGCCTGACGGACAACAGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAAGACGGCGGCGACG-ACCGGCGCCGACGGCGCCGTCGAGCTCGACCTCCCACACGGCGACTACAACCTGACAGTGAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTGTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGA-TTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGATCACTTGGTTCAGCTTAAAAAAAATCAGGTCAGTTATACGCCTAGCCACTGCATTAATATCGCACCTAAC]

[+] EMBL AK070631             [CGTTAGCAGTGAGAGTGACAGACGACACATAGAAGGTTTTCATGGAGAAAGTACTGGTGCTCTCCTTGATATGTATTTCACTCTGCCAAGGATGGGTGGTGCAATCTTTAGAATATGATCATACAGCAAGTATTGAGTGCCTTCGCGATCCGATGAAGCCGCTGTACAACGGCGGCATCATCCAGAACGGCGAGTTCAACAGCGGCCTCATGGGCTGGTCCACGCACCGCGACATCAAGGCCGGCCTGAGCAGCTCGCCGTCCGGCAACAAGTTCGCCGTGGTGCAGCGCGCCGACTCCCTCTCCGGCGCCGCCGTGCCGTCGCGCAGCGTCTACCAGAAGATCCAGCTGCAGGGCGACACCCACTACTCGCTGTCCGCGTGGTTGC AGGTGTCGGCCGGCGCCGCGCACGTGAAGGCGTTCGTCAAGACGCCCAACGGCGAGCGCGTCGTCGCCGGCAGCGTCTCCGCCCAGTCCGGCTGCTGGAGCATGCTCAAGGGCGGCATGACCGCCTACTCCTCCGGCCCAGGGCAGATCTTCTTCGAGAGCGACGCGCCGGTGGACATCTGGATGGACAGCGTGTCGCTGCAGCCGTTCACGTTCGACGAGTGGGACGCGCACCGGCAGCAGTCGGCCGCCAAGGTGCGGAGGAGCACCGTCAGGGTGGTCGTCCGCGGCGCCGACGGCGCGCCCATGGCGAACGCCACGGTGATCGTCGAGCTCCTCCGGGCCGGCTTCCCGTTCGGCAACGCGCTGACCAAGGAGATCCTGGACCTGCCGGCGTACGAGAAGTGGTTCACGTCGCGCTTCACGGTGGCCACGTTCGAGAACGAGATGAAGTGGTACAGCAACGAGTGGGCCCAGAACAACGAGGACTACCGCGTCGCCGACGCCATGCTCAAGCTCGCCCAAAAGTACAACATCAAGATTAGGGGACACAACGTATTCTGGGACGACCAGAACTCGCAGATGAAGTGGGTGACGCCGCTGAACCTGGACCAGCTGAAGGCGGCGATGCAGAAGCGGCTCAAGTCGGTGGTGACGCGGTACGCCGGGAAGGTGATCCACTGGGACGTGGTGAACGAGAACCTGCACTTCAACTTCTTCGAGACCAAGCTGGGGCCGAACGCGTCGCCGATGATCTACAACCAGGTGGGCGCGCTGGACAAGAACGCCATCCTCTTCATGAACGAGTTCAACACGCTGGAGCAGCCCGGTGACCCCAA CCCGGTGCCCAGC AAGTACGTCGCC AAGATGAAGC AGATCCAGAGCTACCCCGGCAACAGCGCCCTCAAGCTCGGCGTCGGCCTCGAGAGCCACTTCTCCACCCCAAACATCCCTTACATGAGGAGCGCCCTCGACACGTTGGCGCAGCTCAAGCTTCCCATGTGGCTCACCGAGGTCGATGTCGTCAAAGGACCCAACCAGGTGAAGTTCTTGGAGCAGGTGCTGAGGGAAGGGTACGCGCACCCGTCGGTGAACGGGATGATAATGTGGGCGGCGTGGCACGCCAAGGGTTGCTACGTGATGTGCCTGACGGACAACAGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAAGACGGCGGCGACG ACCGGCGCCGACGGCGCCGTCGAGCTCGACCTCCCACACGGCGACTACAACCTGACAGTGAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTGTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGA TTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGATCACTTGGTTCAGCTTAATCTATGTCAGGTCAGTTATACGCCTAGCCACTGCATTAATATCGCACCTAAC]
[+] EMBL C72675               [              GTGACAGACGACACATAGAAGGTTTTCATGGAGAAAGTACTGGTGCTCTCCTTGATATGTATTTCACTCTGCCAAGGATGGGTGGTGCAATCTTTAGAATATGATCATACAGCAAGTATTGAGTGCCTTCGCGATCCGATGAAGCCGCTGTACAACGGCGGCATCATCCAGAACGGCGAGTTCAACAGCGGCCTCATGGGCTGGTCCACGCACCGCGACATCAAGGCCGGCCTGAGCAGCTCGCCGTCCGGCAACAAGTTCGCCGTGGTGCAGCGCGCCGACTCCCTCTCCGGCGCCG CGTGCCGTCGCGCAGTCT TACCAGAAGATCCAGCTGCAGGGCGACACCCACTACTCGCTGTCCGCGTGGTTNCAAGGTTTCGGCCGGCGCCGCGCACGTta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C72685               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTGGGACGACCAGAACTCGCAGATGAAGTGGGTGACGCCGCTGAACCTGGACCAGCTGAAGGCGGCGATGCAGAAGCGGCTCAAGTCGGTGGTGACGCGGTAC NCGGGAAGGTGATCCACTGGGACGTGGTGAACGAGAACCTGCACTTCAACTTCTTCGAGACCAAGCTGGGGCCGAACGCGTCGCCGATGATCTACAACCAGGTGGGCGCGCTGGACAAGAACGCCATCCTCTTCATGAACGAGTTNAACACGCTGGAGCAGCCCGGTGACCCCAACCCCGGTGNCCAGC AAGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU101159             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTTGCCCAGCNAAGTACGTCGCCAAAGATGAAGCAAGATCCAGAGCTACCCCGGNAAAAGCGCCCTCAAGCTCGGCGTCGGCCTCGAGACCCACTTCTCCACCCCAAACATCCCTTACATGAGGAGCGCCCTCGACACGTTGGCGCAGCTCAAGCTTCCCATGTGGCTCACCGAGGTCGATGTCGTCAAAGGACCCAACCAGGTGAAGTTCTTGGAGCAGGTGCTGAGGGAAGGGTACGCGCACCCGTCGGTGAACGGGATGATAATGTGGGCGGCGTGGCACGCCAAGGGTTGCTACGTGATGTGCCTGACGGACAACAGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAAGACGGCGGCGACGNACCG  GCCGACGGCGCCGTCGAGCTCGACCTCCCACACGGCGACTACAACCTGACAGTGAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTGTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGATTTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGATCACTTGGTTCAGCTTAAAAAAAA                                              ]
[+] EMBL C98508               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAAGACGGCGGCGACG AACCGCGCCGACGGCGCCGTCGAGCTCGACCTCCCACACGGCGACTACAACCTGACAGTGAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTGTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGA TTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGATCACTTGGTTCAGCTTAAAAAAAAaaa                                           ]


>consensus_10439#0 CGTTAGCAGTGAGAGTGACAGACGACACATAGAAGGTTTTCATGGAGAAAGTACTGGTGC TCTCCTTGATATGTATTTCACTCTGCCAAGGATGGGTGGTGCAATCTTTAGAATATGATC ATACAGCAAGTATTGAGTGCCTTCGCGATCCGATGAAGCCGCTGTACAACGGCGGCATCA TCCAGAACGGCGAGTTCAACAGCGGCCTCATGGGCTGGTCCACGCACCGCGACATCAAGG CCGGCCTGAGCAGCTCGCCGTCCGGCAACAAGTTCGCCGTGGTGCAGCGCGCCGACTCCC TCTCCGGCGCCGCCGTGCCGTCGCGCAGCGTCTACCAGAAGATCCAGCTGCAGGGCGACA CCCACTACTCGCTGTCCGCGTGGTTGCAGGTGTCGGCCGGCGCCGCGCACGTGAAGGCGT TCGTCAAGACGCCCAACGGCGAGCGCGTCGTCGCCGGCAGCGTCTCCGCCCAGTCCGGCT GCTGGAGCATGCTCAAGGGCGGCATGACCGCCTACTCCTCCGGCCCAGGGCAGATCTTCT TCGAGAGCGACGCGCCGGTGGACATCTGGATGGACAGCGTGTCGCTGCAGCCGTTCACGT TCGACGAGTGGGACGCGCACCGGCAGCAGTCGGCCGCCAAGGTGCGGAGGAGCACCGTCA GGGTGGTCGTCCGCGGCGCCGACGGCGCGCCCATGGCGAACGCCACGGTGATCGTCGAGC TCCTCCGGGCCGGCTTCCCGTTCGGCAACGCGCTGACCAAGGAGATCCTGGACCTGCCGG CGTACGAGAAGTGGTTCACGTCGCGCTTCACGGTGGCCACGTTCGAGAACGAGATGAAGT GGTACAGCAACGAGTGGGCCCAGAACAACGAGGACTACCGCGTCGCCGACGCCATGCTCA AGCTCGCCCAAAAGTACAACATCAAGATTAGGGGACACAACGTATTCTGGGACGACCAGA ACTCGCAGATGAAGTGGGTGACGCCGCTGAACCTGGACCAGCTGAAGGCGGCGATGCAGA AGCGGCTCAAGTCGGTGGTGACGCGGTACGCCGGGAAGGTGATCCACTGGGACGTGGTGA ACGAGAACCTGCACTTCAACTTCTTCGAGACCAAGCTGGGGCCGAACGCGTCGCCGATGA TCTACAACCAGGTGGGCGCGCTGGACAAGAACGCCATCCTCTTCATGAACGAGTTCAACA CGCTGGAGCAGCCCGGTGACCCCAACCCGGTGCCCAGCAAGTACGTCGCCAAGATGAAGC AGATCCAGAGCTACCCCGGCAACAGCGCCCTCAAGCTCGGCGTCGGCCTCGAGAGCCACT TCTCCACCCCAAACATCCCTTACATGAGGAGCGCCCTCGACACGTTGGCGCAGCTCAAGC TTCCCATGTGGCTCACCGAGGTCGATGTCGTCAAAGGACCCAACCAGGTGAAGTTCTTGG AGCAGGTGCTGAGGGAAGGGTACGCGCACCCGTCGGTGAACGGGATGATAATGTGGGCGG CGTGGCACGCCAAGGGTTGCTACGTGATGTGCCTGACGGACAACAGCTTCAAGAACCTGC CCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAAGACGGCGGCGA CGACCGGCGCCGACGGCGCCGTCGAGCTCGACCTCCCACACGGCGACTACAACCTGACAG TGAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGT CGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTGTGACACGTACATTGT CCTCGTGCTAGCGTGCTCGATTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTC CTTTTTTGCTTAATTAGTGAATAATAATTGGATCACTTGGTTCAGCTTAAAAAAAATCAG GTCAGTTATACGCCTAGCCACTGCATTAATATCGCACCTAAC



consensusID : consensus_10439#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence
                              [CAGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAANACGGCGGCGACGACCGGCGCCGACGGCNTNCGNAGCTCGACCTCCCACACGGCGACTACAACCTGACAGTNAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTNTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGATTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGTTCACTTGGTTCAGCTTAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGCACCGGGGTTGGNGCTCCAGTTTTTGTTTCCCTTTAGGTGAGGGGTNAAT]

[+] EMBL C71791               [CAGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAANACGGCGGCGACGACCGGCGCCGACGGCNTNCGNAGCTCGACCTCCCACACGGCGACTACAACCTGACAGTNAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTNTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGATTTTTTTTTTGTCAAACAATTTTGTACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGTTCACTTGGTTCAGCTTAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGCACCGGGGTTGGNGCTCCAGTTTTTGTTTCCCTTTAGGTGAGGGGTNAAT]


>consensus_10439#1 CAGCTTCAAGAACCTGCCCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGAC GCACAANACGGCGGCGACGACCGGCGCCGACGGCNTNCGNAGCTCGACCTCCCACACGGC GACTACAACCTGACAGTNAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATG ACGGTGGACGCCGCGTCGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGT NTGACACGTACATTGTCCTCGTGCTAGCGTGCTCGATTTTTTTTTTGTCAAACAATTTTG TACTTGTTTTTATTTCCTTTTTTGCTTAATTAGTGAATAATAATTGGTTCACTTGGTTCA GCTTAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGCACCGGGGTTGGNGCTCCAGTTTTT GTTTCCCTTTAGGTGAGGGGTNAAT



consensusID : consensus_10439#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 279
fasta sequence
                              [CGAACGCCACCGTCCGCGCCATGACGGTGGACNCCGCGTCGTTGGCGTCGGAGCNCCTGGTCANCATTAAGGTNTAGGAGAGTGTGACNCGTANATTGTCCTCGTGCTAGCGTGCTCGATTTTTTTTTTTGTCAAANAATTTTGTACTTGTTTTTATTNCCTTTTTTGCTTAATTAGTGAATAATAATTGGATCNCTTGGTTCAGCTTAATNTATGTCAGGTCAGTTATACGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU094047             [CGAACGCCACCGTCCGCGCCATGACGGTGGACNCCGCGTCGTTGGCGTCGGAGCNCCTGGTCANCATTAAGGTNTAGGAGAGTGTGACNCGTANATTGTCCTCGTGCTAGCGTGCTCGATTTTTTTTTTTGTCAAANAATTTTGTACTTGTTTTTATTNCCTTTTTTGCTTAATTAGTGAATAATAATTGGATCNCTTGGTTCAGCTTAATNTATGTCAGGTCAGTTATACGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10439#2 CGAACGCCACCGTCCGCGCCATGACGGTGGACNCCGCGTCGTTGGCGTCGGAGCNCCTGG TCANCATTAAGGTNTAGGAGAGTGTGACNCGTANATTGTCCTCGTGCTAGCGTGCTCGAT TTTTTTTTTTGTCAAANAATTTTGTACTTGTTTTTATTNCCTTTTTTGCTTAATTAGTGA ATAATAATTGGATCNCTTGGTTCAGCTTAATNTATGTCAGGTCAGTTATACGCCTAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10439#0      CGTTAGCAGTGAGAGTGACAGACGACACATAGAAGGTTTTCATGGAGAAAGTACTGGTGC 60
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCTCCTTGATATGTATTTCACTCTGCCAAGGATGGGTGGTGCAATCTTTAGAATATGATC 120
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      ATACAGCAAGTATTGAGTGCCTTCGCGATCCGATGAAGCCGCTGTACAACGGCGGCATCA 180
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCCAGAACGGCGAGTTCAACAGCGGCCTCATGGGCTGGTCCACGCACCGCGACATCAAGG 240
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CCGGCCTGAGCAGCTCGCCGTCCGGCAACAAGTTCGCCGTGGTGCAGCGCGCCGACTCCC 300
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCTCCGGCGCCGCCGTGCCGTCGCGCAGCGTCTACCAGAAGATCCAGCTGCAGGGCGACA 360
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CCCACTACTCGCTGTCCGCGTGGTTGCAGGTGTCGGCCGGCGCCGCGCACGTGAAGGCGT 420
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCGTCAAGACGCCCAACGGCGAGCGCGTCGTCGCCGGCAGCGTCTCCGCCCAGTCCGGCT 480
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      GCTGGAGCATGCTCAAGGGCGGCATGACCGCCTACTCCTCCGGCCCAGGGCAGATCTTCT 540
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCGAGAGCGACGCGCCGGTGGACATCTGGATGGACAGCGTGTCGCTGCAGCCGTTCACGT 600
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCGACGAGTGGGACGCGCACCGGCAGCAGTCGGCCGCCAAGGTGCGGAGGAGCACCGTCA 660
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      GGGTGGTCGTCCGCGGCGCCGACGGCGCGCCCATGGCGAACGCCACGGTGATCGTCGAGC 720
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCCTCCGGGCCGGCTTCCCGTTCGGCAACGCGCTGACCAAGGAGATCCTGGACCTGCCGG 780
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CGTACGAGAAGTGGTTCACGTCGCGCTTCACGGTGGCCACGTTCGAGAACGAGATGAAGT 840
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      GGTACAGCAACGAGTGGGCCCAGAACAACGAGGACTACCGCGTCGCCGACGCCATGCTCA 900
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      AGCTCGCCCAAAAGTACAACATCAAGATTAGGGGACACAACGTATTCTGGGACGACCAGA 960
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      ACTCGCAGATGAAGTGGGTGACGCCGCTGAACCTGGACCAGCTGAAGGCGGCGATGCAGA 1020
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      AGCGGCTCAAGTCGGTGGTGACGCGGTACGCCGGGAAGGTGATCCACTGGGACGTGGTGA 1080
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      ACGAGAACCTGCACTTCAACTTCTTCGAGACCAAGCTGGGGCCGAACGCGTCGCCGATGA 1140
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCTACAACCAGGTGGGCGCGCTGGACAAGAACGCCATCCTCTTCATGAACGAGTTCAACA 1200
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CGCTGGAGCAGCCCGGTGACCCCAACCCGGTGCCCAGCAAGTACGTCGCCAAGATGAAGC 1260
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      AGATCCAGAGCTACCCCGGCAACAGCGCCCTCAAGCTCGGCGTCGGCCTCGAGAGCCACT 1320
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TCTCCACCCCAAACATCCCTTACATGAGGAGCGCCCTCGACACGTTGGCGCAGCTCAAGC 1380
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TTCCCATGTGGCTCACCGAGGTCGATGTCGTCAAAGGACCCAACCAGGTGAAGTTCTTGG 1440
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      AGCAGGTGCTGAGGGAAGGGTACGCGCACCCGTCGGTGAACGGGATGATAATGTGGGCGG 1500
consensus_10439#1      ------------------------------------------------------------
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CGTGGCACGCCAAGGGTTGCTACGTGATGTGCCTGACGGACAACAGCTTCAAGAACCTGC 1560
consensus_10439#1      -------------------------------------------CAGCTTCAAGAACCTGC 17
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAAGACGGCGGCGA 1620
consensus_10439#1      CCGTTGGGACCCTCGTCGACAAGCTGATCGCCGAGTGGAAGACGCACAANACGGCGGCGA 77
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      CGACCGGCGCCGACGGCGCCGTCGAGCTCGACCTCCCACACGGCGACTACAACCTGACAG 1680
consensus_10439#1      CGACCGGCGCCGACGGCNTN-CGNAGCTCGACCTCCCACACGGCGACTACAACCTGACAG 136
consensus_10439#2      ------------------------------------------------------------
                                                                                   

consensus_10439#0      TGAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGT 1740
consensus_10439#1      TNAGCCACCCGTCCCTGGGAACGAACGCCACCGTCCGCGCCATGACGGTGGACGCCGCGT 196
consensus_10439#2      ---------------------CGAACGCCACCGTCCGCGCCATGACGGTGGACNCCGCGT 39
                                            ******************************** ******

consensus_10439#0      CGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTGTGACACGTACATTGT 1800
consensus_10439#1      CGTTGGCGTCGGAGCGCCTGGTCAACATTAAGGTCTAGGAGAGTNTGACACGTACATTGT 256
consensus_10439#2      CGTTGGCGTCGGAGCNCCTGGTCANCATTAAGGTNTAGGAGAGTGTGACNCGTANATTGT 99
                       *************** ******** ********* ********* **** **** *****

consensus_10439#0      CCTCGTGCTAGCGTGCTCGATTTTTTTTTT-GTCAAACAATTTTGTACTTGTTTTTATTT 1859
consensus_10439#1      CCTCGTGCTAGCGTGCTCGATTTTTTTTTT-GTCAAACAATTTTGTACTTGTTTTTATTT 315
consensus_10439#2      CCTCGTGCTAGCGTGCTCGATTTTTTTTTTTGTCAAANAATTTTGTACTTGTTTTTATTN 159
                       ****************************** ****** ********************* 

consensus_10439#0      CCTTTTTTGCTTAATTAGTGAATAATAATTGGATCACTTGGTTCAGCTTAAAAAAAATCA 1919
consensus_10439#1      CCTTTTTTGCTTAATTAGTGAATAATAATTGGTTCACTTGGTTCAGCTTAAAAAAAAA-A 374
consensus_10439#2      CCTTTTTTGCTTAATTAGTGAATAATAATTGGATCNCTTGGTTCAGCTTAATNTATGTCA 219
                       ******************************** ** ***************   *    *

consensus_10439#0      GGTCAGTTATACGCCTAGCCACTGCATTAATATCGCACCTAAC----------------- 1962
consensus_10439#1      AAAAAAAAAAAGGGGGGGCCGCACCGGGGTTGGNGCTCCAGTTTTTGTTTCCCTTTAGGT 434
consensus_10439#2      GGTCAGTTATACGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 279
                           *   * * *                                               

consensus_10439#0      -----------
consensus_10439#1      GAGGGGTNAAT 445
consensus_10439#2      -----------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)