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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10453 cluster # 10453       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10453#0 length = 684 sequences # 7  

consensusID : consensus_10453#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 684
fasta sequence
                              [TCCTCCGTTGGATTGCGCACGGCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCA-AGG-ACCTGCAGCA-GCAG-A-GCA-AGGCGCTGGACAA-GCTCACCGACCGCGTCG-AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC-TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA-TTGCAGAGAGAACAC-TAC-GGGAGCACAAAGGCGATGCTGTAGC-TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCAT-GATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCTATAAAAAAAAAAGAAAAA]

[+] EMBL AK101289             [TCCTCCGTTGGATTGCGCACGGCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCA AGG ACCTGCAGCA GCAG A GCA AGGCGCTGGACAA GCTCACCGACCGCGTCG AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCAT GATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCT                  ]
[+] EMBL CF325170             [                     GCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCA AGG ACCTGCNGCA GCAG A GCA AGGCGCTGGACAA GCTCACCGACCGCGTCG AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAtc                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI805868             [                                                                                                           tgncgtGCGGCGGCGGCGGGCGGTNCCGCCGCGGGGGAGGCGGCGGTTGACTCCATAGGTACCTGCAGCATGCAGTATGCATAGGCGCTGGACAATGCTCACCGACCGCGTCGTAGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTANC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTCTTCCAa aaaaaaa                                                                                             ]
[+] EMBL CB000625             [                                                                                                                                        CGCGGGGGAGGCGGCGGTTGACTCCA AGG ACCTGCAGCC GCAG A GCA AGGCGCTGGACAA GCTCACCGACCGCGTCG AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCAT GATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCTATAAAAAAAAA       ]
[+] EMBL AU058317             [                                                                                                                                                                                                                                                           AANCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCCTTGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGATTTGCAGAGAGAACACTTACGGGGAGCACAAAGGCGATGCTGTAGCTTGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCGATACACCATATGAAGCA CTGTAGTTTcn                                                                                                                                                                                     ]
[+] EMBL AU058232             [                                                                                                                                                                                                                                                           AATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCATGGATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCTATACCTTCTCAAGAAAAA]
[+] EMBL AU058231             [                                                                                                                                                                                                                                                           AANCCGCTATNGNAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATNCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC NGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATAC                                                                                                                                                                                                              ]


>consensus_10453#0 TCCTCCGTTGGATTGCGCACGGCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGT GGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGG CGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCAAGGACCTGCAGCAGCAGA GCAAGGCGCTGGACAAGCTCACCGACCGCGTCGAGGACCGCCAGCTCGATTCCTCCCGCG TCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGAT TGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCCTGCTGATGTTGAAATTATCGCTA ACGAGCTTGAGTTGGACAAGAAGATTGCAGAGAGAACACTACGGGAGCACAAAGGCGATG CTGTAGCTGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACA CCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACA ATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCATGATGTTGCAAACTGGT CTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGT CTTTCTATAAAAAAAAAAGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)