These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10453#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 684 fasta sequence [TCCTCCGTTGGATTGCGCACGGCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCA-AGG-ACCTGCAGCA-GCAG-A-GCA-AGGCGCTGGACAA-GCTCACCGACCGCGTCG-AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC-TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA-TTGCAGAGAGAACAC-TAC-GGGAGCACAAAGGCGATGCTGTAGC-TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCAT-GATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCTATAAAAAAAAAAGAAAAA] [+] EMBL AK101289 [TCCTCCGTTGGATTGCGCACGGCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCA AGG ACCTGCAGCA GCAG A GCA AGGCGCTGGACAA GCTCACCGACCGCGTCG AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCAT GATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCT ] [+] EMBL CF325170 [ GCAGAAGGGAATTTCTAGGGTTTAGGCAGCGAGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCA AGG ACCTGCNGCA GCAG A GCA AGGCGCTGGACAA GCTCACCGACCGCGTCG AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAtc ] [+] EMBL BI805868 [ tgncgtGCGGCGGCGGCGGGCGGTNCCGCCGCGGGGGAGGCGGCGGTTGACTCCATAGGTACCTGCAGCATGCAGTATGCATAGGCGCTGGACAATGCTCACCGACCGCGTCGTAGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTANC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTCTTCCAa aaaaaaa ] [+] EMBL CB000625 [ CGCGGGGGAGGCGGCGGTTGACTCCA AGG ACCTGCAGCC GCAG A GCA AGGCGCTGGACAA GCTCACCGACCGCGTCG AGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCAT GATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCTATAAAAAAAAA ] [+] EMBL AU058317 [ AANCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCCTTGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGATTTGCAGAGAGAACACTTACGGGGAGCACAAAGGCGATGCTGTAGCTTGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCGATACACCATATGAAGCA CTGTAGTTTcn ] [+] EMBL AU058232 [ AATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC TGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTGTATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCATGGATGTTGCAAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTATCCAAGGTCTTTCTATACCTTCTCAAGAAAAA] [+] EMBL AU058231 [ AANCCGCTATNGNAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATNCCATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCC NGCTGATGTTGAAATTATCGCTAACGAGCTTGAGTTGGACAAGAAGA TTGCAGAGAGAACAC TAC GGGAGCACAAAGGCGATGCTGTAGC TGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGATCTATAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||