These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10464#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2215 fasta sequence [GGCACACTCGCAGTCCCCACTCCAAAAGCCGGAGGAGGAGGAGGCGATTCACCGACATCCCGGAGCGGATCGCGGAGCGCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGTGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCTCAAGTGTATCCTAAGTTGAATAAGATCCTTTTCCTGGATGATGACATAGTTGTTCAGAAGGATTTGACAAGTACCTCAATTTTTCAAATCCAAATATT-GCTCAGAACTTCGATCCTAATGCTTGTGGCTGGG-CGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGTTTGTGTGGCTAAAAAAAAAAAAAAAAAA] [+] EMBL AK068531 [GGCACACTCGCAGTCCCCACTCCAAAAGCCGGAGGAGGAGGAGGCGATTCACCGACATCCCGGAGCGGATCGCGGAGCGCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGTGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCTCAAGTGTATCCTAAGTTGAATAAGATCCTTTTCCTGGATGATGACATAGTTGTTCAGAAGGATTTGACAAGTACCTCAATTTTTCAAATCCAAATATT GCTCAGAACTTCGATCCTAATGCTTGTGGCTGGG CGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGT ] [+] EMBL AU093295 [ CCGACATCCCGGAGCGGATCGCGGA GCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTNAGCTAGATTGGGCCGGGAATNGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAANAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTC ] [+] EMBL CF305782 [ ATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTTCCCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACATGTACTGGACTGGAGTATTCAAGCCACCATTAAACTACAGAATCTCTC ] [+] EMBL CF305826 [ ATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTG ] [+] EMBL CF303948 [ GATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCANGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGC ] [+] EMBL OSC24851 [ CAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGCGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGNGCAATGAACATGTGGTTTTTGTTGA ] [+] EMBL C97574 [ CAAATCCAAATTTTGGCTCAGAACTTCGATCCTAATGCTTGTGGCTGGGNCGTATGGAATGAATATGTTTGATTTGGAAGATTGGAAGAAG AGGACATTACTGGCATTTATCAC AATGGCAGAACATG ATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGTTTGTGTGGCTAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||