cluster # 10474

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Oryza sativa
cluster # 10474 cluster # 10474 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10474#0 length = 1013 sequences # 7
consensusID : consensus_10474#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1013
fasta sequence
                              [AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTCTCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC-ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT-GAGCGAGAGCGTGTGGAATG-----GGCGGCGGCGGCGGCGGAGATGGAGATGGTG-GGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCGGCGTCCAGGCGGCGGTCGCCTTCGCGGCGATGGCGACGGGGACGCCTGCCTACGCTGACGTTGACGCGGATGTCCTGCAGCGACAGCGGCAGCATCACCATCGCCACCAGGGCGCGATGGGGATGGCTGCCGAGTACGACGTCGCACCAGCAACACCGGCTGTCACGTTGAGCGCTGTATCACCACCACCACCACCACCTGCGTTCGCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCGCCATGGACGCGACGGTCTTCTCCGGCATCGGCAACGACGACGTCGTCGACGCGGTGAGCGCCACGGTGGCGATGACTACCAGCCAGTGCGAACGAGTCAGAGGACGCGGCGGC]

[+] EMBL CB640130             [AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTCTCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCGTGTGGAATG     GGCGGCGGCGGCGGCGGAGATGGAGATGGTGNGGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB640756             [AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTCTCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB629360             [                                                                                           GCTACTACTGCAGCCTGCAGGCCCCT CCTCCTCTTGCTGCTGTGCTGCCTTGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGTATAACTCCCATAGAATCAGCAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTATCACTCTCACCATCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCT   ACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCGTGTGGAATGGCGGCGGCGGCGGCGGCGGCGGAGATGGAGATGGTG GGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCG                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB639459             [                                                                                                 ACTGCAGACTGCACGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCCAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCACTTCATTTCATAGCCCAATATGATGATCTCTGCTCCTCCAACCTACCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAACTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB662982             [                                                                                                           GCAGGCCCCTCCCTCCTCTTGCTGCAGTGCAGCCTCAAACGATTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAACCC ATATGATGATCTCTGCTCCCCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAACTCGATCCATCGATCAACCCAACTAAAGAGTAACAAGAGGTTACCTACTACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTTATAGCGAGAGCGTGTGGAAT      GGCGGCGGCGGCGGCGGAGATGGAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C74560               [                                                                                                                                                                                                                                                                                                                                                                                      ACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCTTGTGGAAT      GGCGGCGGCGGCGGCGGAGATGGAGATGGTG GGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGANGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTTCCGCGGGGGCG                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB626584             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCGGCGTCCAGGCGGCGGTCGCCTTCGCGGCGATGGCGACGGGGACGCCTGCCTACGCTGACGTTGACGCGGATGTCCTGCAGCGACAGCGGCAGCATCACCATCGCCACCAGGGCGCGATGGGGATGGCTGCCGAGTACGACGTCGCACCAGCAACACCGGCTGTCACGTTGAGCGCTGTATCACCACCACCACCACCACCTGCGTTCGCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCGCCATGGACGCGACGGTCTTCTCCGGCATCGGCAACGACGACGTCGTCGACGCGGTGAGCGCCACGGTGGCGATGACTACCAGCCAGTGCGAACGAGTCAGAGGACGCGGCGGC]




>consensus_10474#0
AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTC
TCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCC
TCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCA
ATTCATTTCATAGCCCATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCC
ATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAG
TAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAG
GTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTTGAGCGA
GAGCGTGTGGAATGGGCGGCGGCGGCGGCGGAGATGGAGATGGTGGGGCGGTGGTGCTGC
CGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGAGGC
TGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGG
GGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCG
GCGTCCAGGCGGCGGTCGCCTTCGCGGCGATGGCGACGGGGACGCCTGCCTACGCTGACG
TTGACGCGGATGTCCTGCAGCGACAGCGGCAGCATCACCATCGCCACCAGGGCGCGATGG
GGATGGCTGCCGAGTACGACGTCGCACCAGCAACACCGGCTGTCACGTTGAGCGCTGTAT
CACCACCACCACCACCACCTGCGTTCGCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCG
CCATGGACGCGACGGTCTTCTCCGGCATCGGCAACGACGACGTCGTCGACGCGGTGAGCG
CCACGGTGGCGATGACTACCAGCCAGTGCGAACGAGTCAGAGGACGCGGCGGC
clustalw multiple alignements is not computed in this case