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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10502#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3121 fasta sequence
[CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAAAGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATATGGGGGGGGGGGGGGGGTCCGGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTGCAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTGCAGTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTGATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAGTGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAACATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACAATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG]
[+] EMBL AK100742 [CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAAAGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATATGGGGGGGGGGGGGGGGTCCGGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTGCAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTGCAGTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTGATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAGTGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAACATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACAATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG]
[+] EMBL AK066608 [CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAAAGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATAT GGGGGGGGGGGGGGGTCCGGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTGCAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTGCAGTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTGATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAGTGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAACATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTAC TTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACAATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG]
[+] EMBL AK067307 [ TATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAGAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATATCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTGTGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACGATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGGGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG]
[+] EMBL CB667301 [ AGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG]
consensusID : consensus_10502#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 568 fasta sequence
[TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTNTATATACACAAAGTA]
[+] EMBL CB641257 [TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTNTATATACACAAAGTA]
[+] EMBL CB641245 [TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAAGTAAGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATGTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGC ]
[+] EMBL CB641002 [taCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTACACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10502#0 CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGA 60
consensus_10502#1 --------------------------TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGA 34
**********************************
consensus_10502#0 ACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCC 120
consensus_10502#1 ACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCC 94
************************************************************
consensus_10502#0 ATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGC 180
consensus_10502#1 ATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGC 154
************************************************************
consensus_10502#0 GGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGAC 240
consensus_10502#1 GGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGAC 214
************************************************************
consensus_10502#0 TCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAA 300
consensus_10502#1 TCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAA 274
******************************************************** **
consensus_10502#0 AGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATATGGGGGGGGGGGGGGGGTCC 360
consensus_10502#1 GTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCC 334
* * * * *** ** ** * * * * *** * ***
consensus_10502#0 GGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTG 420
consensus_10502#1 --TTGTATGAACACCACA----CAGATTT-----GGATTTAAA---GAATGCGCTGCTTC 380
** **** ** * ** * * **** * * * **** ** **
consensus_10502#0 CAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTG-CA 479
consensus_10502#1 ATGAAATGATTCATGCTTATATGTGCATCAAAGATA---GTAATGATAACCATAGTGACC 437
* ** * * * * * * ** ** ** * * ** **** *
consensus_10502#0 GTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTG 539
consensus_10502#1 ATGGGCCAAAATTCCAGAAACTGATGAATACAATCA-ATTTAAACTCTGTAGCCGATCCT 496
* * ** ** * * ** * * * * ******* * **
consensus_10502#0 ATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAG 599
consensus_10502#1 CATCGTCCTCTTGGTGGCTACAGCATAACTGTGT------TCCATGAGATCAGAAAGAAA 550
*** * * *** * * * ** * **** *** * *
consensus_10502#0 TGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAAC 659
consensus_10502#1 TTN-TATATACACAAAGTA----------------------------------------- 568
* * ** * **** *
consensus_10502#0 ATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTG 719
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTC 779
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGAC 839
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGT 899
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 GGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAA 959
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCG 1019
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGA 1079
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCAT 1139
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAA 1199
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTG 1259
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCC 1319
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTG 1379
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTT 1439
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTC 1499
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACC 1559
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATT 1619
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 GGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAA 1679
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 GAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTC 1739
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGT 1799
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 GGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAG 1859
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAAC 1919
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCT 1979
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCC 2039
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCC 2099
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAA 2159
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACA 2219
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATC 2279
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCA 2339
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATT 2399
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 GGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCC 2459
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 GTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAG 2519
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAA 2579
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATT 2639
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATT 2699
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGT 2759
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 ATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAAC 2819
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGT 2879
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 CTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCT 2939
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCC 2999
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 AGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGG 3059
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATT 3119
consensus_10502#1 ------------------------------------------------------------
consensus_10502#0 TG 3121
consensus_10502#1 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||