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Oryza sativa
cluster # 10504 cluster # 10504       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10504#0 length = 2362 sequences # 2  
consensus_10504#1 length = 1456 sequences # 5  

consensusID : consensus_10504#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2362
fasta sequence
                              [GAAATAAGCGCAGGCGATTCTTTCTTTAGAGGGGTTGCACTTTTGGGAGCCCAACTTGTGTGCTAATAATTTTCTTCTCTTAGTTTTCTTTTGCTGATGTTAACACGGCTAGCTAGGCCTTTTGCGTCTTGTCTCCTTGCTTCTGTATCATTTCTCGCGTGGAAGAAAGCCTACTGAATGAATATACAATGTTTGACCCTATCTAGGCTTATGGTCCCTTTTGCATAGTAGTTCCTTTTGCTGCGTGTAGAGGATTTGTTTTCTACTTTGAAATTGCGACGAAATAAGTGTACAAATCTCTGCCAGCTATGTTTGTTATGATCCTTTGTTGCTACAAGCAAGGTTGTTTATATACACCTTTTGTTGTAGTACAAAAGTGAGGGTCTCAACTCTGAATGGGATAATCTGTCACAATGTACCTGCATTCTTTCCTTTGTTTGGACCACGTAGTGCCACATTGCCATTTGTGACCTTATTAAGATGATCAGTTGGTAGTAAGCCTATAGAACATCAGCATTATATCATGCCAGGATGTGGTTGCAATATTGTGGTTTCTAGATAACTTATTCTGCCGGTAAGATGTACCCTTTTACACATTATAGAATCTGGTTGGAATTTTGAAATCTCTTGGAAGTTTTATCATTTTAATTCTAAGGTAAAGTCCATTTTTGGCACTCAAAACTTGTTGGATTCCATTTTTTACCGTTAACTTAAAACCCAGTCATTTCTCACACTCAACTTTCAAAACCAGAAAAATAACACCCAAAAGCTGATTCCATGGTAGTTTTGATTGACATGACAACTGACATAGCCTTCAGGTACTAAACTTTGTTGGTGTGGAACTGTGGACCTAAGTGGCATCCACATTAGCAAGACATGTATAGTAGGAGTCTGCACTAGTGAAAACCATCACCATGTCAATAAAAACACTGTGAATATGGTCTAGAGTGTTATTGATTTGCTTTTGAGAGTCGAGGGCGAAAAAATGAAAAAAAAAACTGGTTATTGAGTTTAGCATGAAAAAGGACTTCTAGAATAGTTCAAGCACCAAACATGGTCTTTAACCTAGTTGTTTTAACTACCTCAGAGGCCCAGATGTCTATGCACTATGCTTTGTTATGTTGTGTACATTCTGTAACACCCTTCATTTTCTGATGATTTGCATATACAAAGGAAACCCTCACAGCCTCACCATCCATATATTAACTTCTAATTAGATATGGCTTGTCATTACTGTTTTGTTTCTTCTATAAATTTCTTCTTGCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATGTCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACTTTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTATCTCAAATCTCTCTTTGTCAAATTAACATNGGTTAAACGGTGTAANCAAGACTTTGGTTACACTCGGCTGANAAANNAAAAN]

[+] EMBL AK065682             [GAAATAAGCGCAGGCGATTCTTTCTTTAGAGGGGTTGCACTTTTGGGAGCCCAACTTGTGTGCTAATAATTTTCTTCTCTTAGTTTTCTTTTGCTGATGTTAACACGGCTAGCTAGGCCTTTTGCGTCTTGTCTCCTTGCTTCTGTATCATTTCTCGCGTGGAAGAAAGCCTACTGAATGAATATACAATGTTTGACCCTATCTAGGCTTATGGTCCCTTTTGCATAGTAGTTCCTTTTGCTGCGTGTAGAGGATTTGTTTTCTACTTTGAAATTGCGACGAAATAAGTGTACAAATCTCTGCCAGCTATGTTTGTTATGATCCTTTGTTGCTACAAGCAAGGTTGTTTATATACACCTTTTGTTGTAGTACAAAAGTGAGGGTCTCAACTCTGAATGGGATAATCTGTCACAATGTACCTGCATTCTTTCCTTTGTTTGGACCACGTAGTGCCACATTGCCATTTGTGACCTTATTAAGATGATCAGTTGGTAGTAAGCCTATAGAACATCAGCATTATATCATGCCAGGATGTGGTTGCAATATTGTGGTTTCTAGATAACTTATTCTGCCGGTAAGATGTACCCTTTTACACATTATAGAATCTGGTTGGAATTTTGAAATCTCTTGGAAGTTTTATCATTTTAATTCTAAGGTAAAGTCCATTTTTGGCACTCAAAACTTGTTGGATTCCATTTTTTACCGTTAACTTAAAACCCAGTCATTTCTCACACTCAACTTTCAAAACCAGAAAAATAACACCCAAAAGCTGATTCCATGGTAGTTTTGATTGACATGACAACTGACATAGCCTTCAGGTACTAAACTTTGTTGGTGTGGAACTGTGGACCTAAGTGGCATCCACATTAGCAAGACATGTATAGTAGGAGTCTGCACTAGTGAAAACCATCACCATGTCAATAAAAACACTGTGAATATGGTCTAGAGTGTTATTGATTTGCTTTTGAGAGTCGAGGGCGAAAAAATGAAAAAAAAAACTGGTTATTGAGTTTAGCATGAAAAAGGACTTCTAGAATAGTTCAAGCACCAAACATGGTCTTTAACCTAGTTGTTTTAACTACCTCAGAGGCCCAGATGTCTATGCACTATGCTTTGTTATGTTGTGTACATTCTGTAACACCCTTCATTTTCTGATGATTTGCATATACAAAGGAAACCCTCACAGCCTCACCATCCATATATTAACTTCTAATTAGATATGGCTTGTCATTACTGTTTTGTTTCTTCTATAAATTTCTTCTTGCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATGTCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACTTTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTATCTCAAATC                                                                         ]
[+] EMBL CA764754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACAGCCNTATGNAACATGNCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGATNTTACATGTTNCTTGATCCTTNTTTTATAGTAATAATNCCTATTTGTTTTGCTTNGTTGCCTTAGNAAGCATTGTGAGACACTTTTGTTTATTTTGAGGACATTTATGTCCAATACTTGAATTTGTAAATTGTAGTGAAACTATCTCAAATCTCTCTTTGTCAAATTAACATNGGTTAAACGGTGTAANCAAGACTTTGGTTACACTCGGCTGANAAANNAAAAN]


>consensus_10504#0 GAAATAAGCGCAGGCGATTCTTTCTTTAGAGGGGTTGCACTTTTGGGAGCCCAACTTGTG TGCTAATAATTTTCTTCTCTTAGTTTTCTTTTGCTGATGTTAACACGGCTAGCTAGGCCT TTTGCGTCTTGTCTCCTTGCTTCTGTATCATTTCTCGCGTGGAAGAAAGCCTACTGAATG AATATACAATGTTTGACCCTATCTAGGCTTATGGTCCCTTTTGCATAGTAGTTCCTTTTG CTGCGTGTAGAGGATTTGTTTTCTACTTTGAAATTGCGACGAAATAAGTGTACAAATCTC TGCCAGCTATGTTTGTTATGATCCTTTGTTGCTACAAGCAAGGTTGTTTATATACACCTT TTGTTGTAGTACAAAAGTGAGGGTCTCAACTCTGAATGGGATAATCTGTCACAATGTACC TGCATTCTTTCCTTTGTTTGGACCACGTAGTGCCACATTGCCATTTGTGACCTTATTAAG ATGATCAGTTGGTAGTAAGCCTATAGAACATCAGCATTATATCATGCCAGGATGTGGTTG CAATATTGTGGTTTCTAGATAACTTATTCTGCCGGTAAGATGTACCCTTTTACACATTAT AGAATCTGGTTGGAATTTTGAAATCTCTTGGAAGTTTTATCATTTTAATTCTAAGGTAAA GTCCATTTTTGGCACTCAAAACTTGTTGGATTCCATTTTTTACCGTTAACTTAAAACCCA GTCATTTCTCACACTCAACTTTCAAAACCAGAAAAATAACACCCAAAAGCTGATTCCATG GTAGTTTTGATTGACATGACAACTGACATAGCCTTCAGGTACTAAACTTTGTTGGTGTGG AACTGTGGACCTAAGTGGCATCCACATTAGCAAGACATGTATAGTAGGAGTCTGCACTAG TGAAAACCATCACCATGTCAATAAAAACACTGTGAATATGGTCTAGAGTGTTATTGATTT GCTTTTGAGAGTCGAGGGCGAAAAAATGAAAAAAAAAACTGGTTATTGAGTTTAGCATGA AAAAGGACTTCTAGAATAGTTCAAGCACCAAACATGGTCTTTAACCTAGTTGTTTTAACT ACCTCAGAGGCCCAGATGTCTATGCACTATGCTTTGTTATGTTGTGTACATTCTGTAACA CCCTTCATTTTCTGATGATTTGCATATACAAAGGAAACCCTCACAGCCTCACCATCCATA TATTAACTTCTAATTAGATATGGCTTGTCATTACTGTTTTGTTTCTTCTATAAATTTCTT CTTGCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTT GACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGA GAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAG CTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAA TTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACAT GCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAG TGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAA AATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCC GATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAG CTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTG CCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACT TGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAA CCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAG AGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATG TCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTT TTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACT TTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTA TCTCAAATCTCTCTTTGTCAAATTAACATNGGTTAAACGGTGTAANCAAGACTTTGGTTA CACTCGGCTGANAAANNAAAAN



consensusID : consensus_10504#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1456
fasta sequence
                              [CTNTCCGAGTCGCNGCTCTCTCCNTNCCGATCGATCCATCGCGGGGTGATGCCCTCGNGCTNGCGGCGGTGACCTCGCCGCCGGCGGCCGCGCCATGACATCCTCCCCCTCCTGGTTCTCCGGCATCGCCCGCGCCTCCTCCGCCATGCCCCCCGGCGGCGTCGCCTCCGCGGCCGCTCCCCTCTCCGATGGCGCGGGTGGGAGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGAGTAGTCGCCGCCGTGGTTGCTGCGGGGCCTGGCGCTGGTGCTGGCGTTGGCGCGGGCGGGAAGAGGAGGCAGGTGCAGGGGGCGCTGTTCAAGTACGGCCCCAAGTCCGCCCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATGTCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACTTTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTATCTCAAATCTCTCTTTGTCAAATTAACATTGGTTAAACGGTGTAATCAAGACTTTGGTTATACTCGGCTGAATTGACACTTATGAAAG]

[+] EMBL D43548               [CTNTCCGAGTCGCNGCTCTCTCCNTNCCGATCGATCCATCGCGGGGTGATGCCCTCGNGCTNGCGGCGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK065959             [            ccGCTCTCTCCCTCCCGATCGATCCATCGCGGGGTGATGCCCTCGCGCTCGCGGCGGTGACCTCGCCGCCGGCGGCCGCGCCATGACATCCTCCCCCTCCTGGTTCTCCGGCATCGCCCGCGCCTCCTCCGCCATGCCCCCCGGCGGCGTCGCCTCCGCGGCCGCTCCCCTCTCCGATGGCGCGGGTGGGAGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGAGTAGTCGCCGCCGTGGTTGCTGCGGGGCCTGGCGCTGGTGCTGGCGTTGGCGCGGGCGGGAAGAGGAGGCAGGTGCAGGGGGCGCTGTTCAAGTACGGCCCCAAGTCCGCCCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATGTCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACTTTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTATCTCAAATCTCTCTTTGTCAAATTAACATTGGTTAAACGGTGTAATCAAGACTTTGGTTATACTCGGCTGAATTGACACTTATGAAAG]
[+] EMBL C72879               [                                                                                                                                                                                                                                                                                                                                                                                            ACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTNTCTGGGGTCATTTTGCAGGCNCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACNGCAGAAATGATAGATTTGGCAGC AAAATGTTAAGTGAAGGCCGTGGAATGGATTTGATGNCCAGGGAAGCAAGCCCAGATGCn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA882848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGGATATTGTACATTACATGCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACCACAGCCATATGTAACATGTCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCAT                                                                                                                                                               ]
[-] EMBL CB678438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATGTCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATA                                                                                                                                                                                                          ]


>consensus_10504#1 CTNTCCGAGTCGCNGCTCTCTCCNTNCCGATCGATCCATCGCGGGGTGATGCCCTCGNGC TNGCGGCGGTGACCTCGCCGCCGGCGGCCGCGCCATGACATCCTCCCCCTCCTGGTTCTC CGGCATCGCCCGCGCCTCCTCCGCCATGCCCCCCGGCGGCGTCGCCTCCGCGGCCGCTCC CCTCTCCGATGGCGCGGGTGGGAGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGG AGTAGTCGCCGCCGTGGTTGCTGCGGGGCCTGGCGCTGGTGCTGGCGTTGGCGCGGGCGG GAAGAGGAGGCAGGTGCAGGGGGCGCTGTTCAAGTACGGCCCCAAGTCCGCCCAGGTCGC ATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTTGACGGATGGGTT TTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGAGAAATGGTCACT GGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAGCTTAGAGCAGGA TGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAATTCTGATGGAGT AATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACATGCGGACAAATTT TGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAGTGACAGGGAGTA TAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAAAATGTTAAGTGA GGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCCGATTACTGCCTA CAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAGCTCAGATCTTAG TGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTGCCAGGTTATTTT CTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACTTGTGGACAGATT ATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAACCATGCTCTCTC CAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAGAGAGGGGCCCAA AGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATGTCTATCCCATTT TCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTTTTTATAGTAATA ATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACTTTTGTTTATTTT GTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTATCTCAAATCTCT CTTTGTCAAATTAACATTGGTTAAACGGTGTAATCAAGACTTTGGTTATACTCGGCTGAA TTGACACTTATGAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10504#0      GAAATAAGCGCAGGCGATTCTTTCTTTAGAGGGGTTGCACTTTTGGGAGCCCAACTTGTG 60
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      TGCTAATAATTTTCTTCTCTTAGTTTTCTTTTGCTGATGTTAACACGGCTAGCTAGGCCT 120
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      TTTGCGTCTTGTCTCCTTGCTTCTGTATCATTTCTCGCGTGGAAGAAAGCCTACTGAATG 180
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      AATATACAATGTTTGACCCTATCTAGGCTTATGGTCCCTTTTGCATAGTAGTTCCTTTTG 240
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      CTGCGTGTAGAGGATTTGTTTTCTACTTTGAAATTGCGACGAAATAAGTGTACAAATCTC 300
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      TGCCAGCTATGTTTGTTATGATCCTTTGTTGCTACAAGCAAGGTTGTTTATATACACCTT 360
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      TTGTTGTAGTACAAAAGTGAGGGTCTCAACTCTGAATGGGATAATCTGTCACAATGTACC 420
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      TGCATTCTTTCCTTTGTTTGGACCACGTAGTGCCACATTGCCATTTGTGACCTTATTAAG 480
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      ATGATCAGTTGGTAGTAAGCCTATAGAACATCAGCATTATATCATGCCAGGATGTGGTTG 540
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      CAATATTGTGGTTTCTAGATAACTTATTCTGCCGGTAAGATGTACCCTTTTACACATTAT 600
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      AGAATCTGGTTGGAATTTTGAAATCTCTTGGAAGTTTTATCATTTTAATTCTAAGGTAAA 660
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      GTCCATTTTTGGCACTCAAAACTTGTTGGATTCCATTTTTTACCGTTAACTTAAAACCCA 720
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      GTCATTTCTCACACTCAACTTTCAAAACCAGAAAAATAACACCCAAAAGCTGATTCCATG 780
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      GTAGTTTTGATTGACATGACAACTGACATAGCCTTCAGGTACTAAACTTTGTTGGTGTGG 840
consensus_10504#1      ------------------------------------------------------------
                                                                                   

consensus_10504#0      AACTGTGGACCTAAGTGGCATCCACATTAGCAAGACATGTATAGTAGGAGTCTGCACTAG 900
consensus_10504#1      ---------------------------------------------------CTNTCCGAG 9
                                                                          **   * **

consensus_10504#0      TGAAAACCATCACCATGTCAATAAAAACACTGTGAATATGGTCTAGAGTGTTATTGATTT 960
consensus_10504#1      TCGCNGCTCTCTCCNTNCCGATCGATCCATCGCGGGGTGATGCCCTCGNGCTNGCGGCGG 69
                       *     *  ** ** *  * **  *  **  * *        *    * * *   *    

consensus_10504#0      GCTTTTGAGAGTCGAGGGCGAAAAAATGAAAAAAAAAACTGGTTATTGAGTTTAGCATGA 1020
consensus_10504#1      TGACCTCGCCGCCGGCGGCCGCGCCATGACATCCTCCCCCTCCTGGTTC-TCCGGCATCG 128
                            *    * **  ***      **** *       *    *  *   *   ****  

consensus_10504#0      AAAAGGACTTCTAGAATAGTTCAAGCACCAAACATGGTCTTTAACCTAGTTGTTTTAACT 1080
consensus_10504#1      CCCGCGCCTCCT----CCGCCATGCCCCCCGGCGGCGTCGCCTCCGCGGCCGCTCC--CC 182
                            * ** **      *      * **   *   ***     *   *  * *    * 

consensus_10504#0      ACCTCAGAGGCCCAGATGTCTATGCACTATGCTTTGTTATGTTGTGTACATTCTGTAACA 1140
consensus_10504#1      TCTCCGATGGCGCGGGTGGG-AGGGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGA 241
                        *  *   *** * * **   * *  *  **       * ** * *       ** *  *

consensus_10504#0      CCCTTCATTTTCTGATGATTTGCATATACAAAGGAAACCCTCACAGCCTCACCATCCATA 1200
consensus_10504#1      GTAGTCGCCGCC--GTGGTTGCTGCGGGGCCTGGCGCTGGTGCTGGCGTTGGCG--CGGG 297
                           **     *   ** **            **      *    ** *   *   *   

consensus_10504#0      TATTAACTTCTAATTAGATATGGCTTGTCATTACTGTTTTGTTTCTTCTATAAATTTCTT 1260
consensus_10504#1      CGGGAA-----GAGGAGGCAGGTGCAGGGGGCGCTGTTCAAGTACGGCCCCAAG----TC 348
                           **      *  **  * *    *      *****    * *  *   **     * 

consensus_10504#0      CTTGCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTT 1320
consensus_10504#1      CGCCCAGGTCGCATTTAAAACTGGTGATTTTAACCACCAGGTGATCTTCATCGGTGGTTT 408
                       *   ********************************************************

consensus_10504#0      GACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGA 1380
consensus_10504#1      GACGGATGGGTTTTTAGCAACCGACTACTTGGAGCCTTTGTCACTTGCACTAGAGGTCGA 468
                       ************************************************************

consensus_10504#0      GAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAG 1440
consensus_10504#1      GAAATGGTCACTGGTACAGCCGTTACTTTCTTCATCATACACTGGGTATGGAATTTCCAG 528
                       ************************************************************

consensus_10504#0      CTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAA 1500
consensus_10504#1      CTTAGAGCAGGATGCATTGGAACTAGATCAACTCATCAGTTACTTGATAAACAAAGAAAA 588
                       ************************************************************

consensus_10504#0      TTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACAT 1560
consensus_10504#1      TTCTGATGGAGTAATATTGCTTGGTCACAGTACTGGTTGCCAGGATATTGTGCATTACAT 648
                       ************************************************************

consensus_10504#0      GCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAG 1620
consensus_10504#1      GCGGACAAATTTTGCATGTTCCAAGGCAGTTTCTGGGGTCATTTTGCAGGCCCCAGTAAG 708
                       ************************************************************

consensus_10504#0      TGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAA 1680
consensus_10504#1      TGACAGGGAGTATAGAGCAACACTTCCAGAAACTGCAGAAATGATAGATTTGGCAGCAAA 768
                       ************************************************************

consensus_10504#0      AATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCC 1740
consensus_10504#1      AATGTTAAGTGAGGGCCGTGGAATGGATTTGATGCCCAGGGAAGCAAATCCAGATGCTCC 828
                       ************************************************************

consensus_10504#0      GATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAG 1800
consensus_10504#1      GATTACTGCCTACAGGTATCACTCCCTTTGTGCATATATGGGTGATGATGACATGTTCAG 888
                       ************************************************************

consensus_10504#0      CTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTG 1860
consensus_10504#1      CTCAGATCTTAGTGAAGATCAGTTGAGGCAGAGACTTGGTCATATGTCAACAACACAGTG 948
                       ************************************************************

consensus_10504#0      CCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACT 1920
consensus_10504#1      CCAGGTTATTTTCTCAATGGGGGATGAATATGTCCCGGAATACGTTGATAAGGAGGCACT 1008
                       ************************************************************

consensus_10504#0      TGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAA 1980
consensus_10504#1      TGTGGACAGATTATGTCGCGCATTGGGCAACGCGGAGAAAGTTGAAATAGAATGGGGAAA 1068
                       ************************************************************

consensus_10504#0      CCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAG 2040
consensus_10504#1      CCATGCTCTCTCCAATAGGGTGCAAGAAGCAGTTCGGGCCATTGTAGATTTTGTTAAGAG 1128
                       ************************************************************

consensus_10504#0      AGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATG 2100
consensus_10504#1      AGAGGGGCCCAAAGGTTGGGACGATCCATGGAGCTAGATACAACAGCCATATGTAACATG 1188
                       ************************************************************

consensus_10504#0      TCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTT 2160
consensus_10504#1      TCTATCCCATTTTCCTCCCCTAGCAAAACGTCTTGTTTTTACATGTTTCTTGATCATTTT 1248
                       ************************************************************

consensus_10504#0      TTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACT 2220
consensus_10504#1      TTTATAGTAATAATTCCTATTTGTTTTGCTTTGTTGCCTTAGTAAGCATTGTGAGACACT 1308
                       ************************************************************

consensus_10504#0      TTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTA 2280
consensus_10504#1      TTTGTTTATTTTGTGGACATTTATGTACAATACTTGAATTTGTAAATTGTAGTGAAACTA 1368
                       ************************************************************

consensus_10504#0      TCTCAAATCTCTCTTTGTCAAATTAACATNGGTTAAACGGTGTAANCAAGACTTTGGTTA 2340
consensus_10504#1      TCTCAAATCTCTCTTTGTCAAATTAACATTGGTTAAACGGTGTAATCAAGACTTTGGTTA 1428
                       ***************************** *************** **************

consensus_10504#0      CACTCGGCTGANAAANNAAAAN------ 2362
consensus_10504#1      TACTCGGCTGAATTGACACTTATGAAAG 1456
                        **********      *          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)