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Oryza sativa
cluster # 10505 cluster # 10505       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10505#0 length = 1861 sequences # 6  
consensus_10505#1 length = 593 sequences # 1  

consensusID : consensus_10505#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1861
fasta sequence
                              [CCGCCTCCCCCGCCATCCGCGTGGCCGCCTTCCCCAACCGCAGCGCTCTGAAACACAAACTTCCCCAATCCCCAATCCCCAATCCCCCAATCTACCCCAGCTTTCTCCCGATAATTCTCTCCTCCGATTTCGCCGCCTTCCCTCCCGCTCGGGCCATCGACGCAGCCTCCCCTAAAGAACAACACCTACCCTCTGCCGCGTCGGCGAAGAGATGGGGAAGCACGAGTTCCTGACGCCGAAGGCGATCGCGAACAGGATCAAGGCGAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTGCCAGAAGCAGTGCCGCGACGAGAATGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGCCAGATGCAGGTGTTCGGCCAGGCCCCCGACCGAGTCGTCGAGGGCTTCTCCGAGGAGTTCCTCGACGCCTTCCTCACCTTGCTCCGCCGCGCCCACCGCCACTCCCGCATCGCCGCCACCGTCGTCTACAACGAGTTCATCGCCGACCGCCACCACGTCCACATGAACTCCACGCGCTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGGCGCGAGGGCCACTGCAAGGTTGAGGACACTCCCAAAGGGTGGTTCATCACCTACATCGACCGCGACTCCGAGCAGGCCGTGAAGGCCAGGCTCAAGCGCAAGAGGATCAAGTCCGACCTTGCGGAGGACGAGCGGCAGGAGCGCATGATTGCACGCCAGATAGAGCGAGCCCAGCAATCCATGGGTAAAACTAATGGTGAACTTGGTGATGATGCTAGTCCGGATGGTAGCGAAGGTGAGTCCGGCAGCGAAGATGAGTATTCGGACTCAGAAAATGACCATGAGGGACAAGAGGAGGATGCAAAAGAAGCCAACAAAGCAGCAGGGAAGATTGCAATTGCACTTCAGCGGGCTGTGCCAGGGCCAAAGGTTAACCCTCTCGATGATAAGCCAAAGGTTAAATTTGGTTTTGAGGAAGAGGATGAGGTGAGCGCGCGGGATAAGGAGAAGGAAGAGTTGGCCAAGAAGAAGGGAAAGGATGCTATAAACGCAGCAGAAGCTAGGAGGTCAGCATTGGATGAGCTGATGAAGGAGGAGGAGAAAGCGAAGGAGCGGAGCAATAGGAAGGATTACTGGCTATGCCCAGGTATTGTGGTCAAGGTGATGAGCAAGTCGCTGGCAGAGAAGGGGTACTGCAAACAGAAGGGTGTGGTGAAGAGGGTGATTGATAAGTATGTTGGGGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGACAGTTAT-CCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGC-TTACCGGGGATCTAATGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCAAAGTGCAGGTTG-AGAAGGGCCTCTATGATGGGAAGGTTCTTAAG-GCCATTGAGTACGAGGACATTTGCAAGATTTTTCACTGAGATATCATGGAATTCCA-TCTTATTTCTGGAGCATTACTGCTGTCAAATGTCAAACATATGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACAT-GTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTGGTGATTAGAATGATATGACATTTTTTCAACATGTAATCTC-TCCATAATT-GTTTCTGATAAAACTTGGTAGTTTACCCAATAAAATTTACTCCGCCAGTTCCTTTTTTTTTTTAAAAAAAAA]

[+] EMBL AK069396             [CCGCCTCCCCCGCCATCCGCGTGGCCGCCTTCCCCAACCGCAGCGCTCTGAAACACAAACTTCCCCAATCCCCAATCCCCAATCCCCCAATCTACCCCAGCTTTCTCCCGATAATTCTCTCCTCCGATTTCGCCGCCTTCCCTCCCGCTCGGGCCATCGACGCAGCCTCCCCTAAAGAACAACACCTACCCTCTGCCGCGTCGGCGAAGAGATGGGGAAGCACGAGTTCCTGACGCCGAAGGCGATCGCGAACAGGATCAAGGCGAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTGCCAGAAGCAGTGCCGCGACGAGAATGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGCCAGATGCAGGTGTTCGGCCAGGCCCCCGACCGAGTCGTCGAGGGCTTCTCCGAGGAGTTCCTCGACGCCTTCCTCACCTTGCTCCGCCGCGCCCACCGCCACTCCCGCATCGCCGCCACCGTCGTCTACAACGAGTTCATCGCCGACCGCCACCACGTCCACATGAACTCCACGCGCTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGGCGCGAGGGCCACTGCAAGGTTGAGGACACTCCCAAAGGGTGGTTCATCACCTACATCGACCGCGACTCCGAGCAGGCCGTGAAGGCCAGGCTCAAGCGCAAGAGGATCAAGTCCGACCTTGCGGAGGACGAGCGGCAGGAGCGCATGATTGCACGCCAGATAGAGCGAGCCCAGCAATCCATGGGTAAAACTAATGGTGAACTTGGTGATGATGCTAGTCCGGATGGTAGCGAAGGTGAGTCCGGCAGCGAAGATGAGTATTCGGACTCAGAAAATGACCATGAGGGACAAGAGGAGGATGCAAAAGAAGCCAACAAAGCAGCAGGGAAGATTGCAATTGCACTTCAGCGGGCTGTGCCAGGGCCAAAGGTTAACCCTCTCGATGATAAGCCAAAGGTTAAATTTGGTTTTGAGGAAGAGGATGAGGTGAGCGCGCGGGATAAGGAGAAGGAAGAGTTGGCCAAGAAGAAGGGAAAGGATGCTATAAACGCAGCAGAAGCTAGGAGGTCAGCATTGGATGAGCTGATGAAGGAGGAGGAGAAAGCGAAGGAGCGGAGCAATAGGAAGGATTACTGGCTATGCCCAGGTATTGTGGTCAAGGTGATGAGCAAGTCGCTGGCAGAGAAGGGGTACTGCAAACAGAAGGGTGTGGTGAAGAGGGTGATTGATAAGTATGTTGGGGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGACAGTTAT CCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGC TTACCGGGGATCTAATGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCAAAGTGCAGGTTG AGAAGGGCCTCTATGATGGGAAGGTTCTTAAG GCCATTGAGTACGAGGACATTTGCAAGATTTTTCACTGAGATATCATGGAATTCCA TCTTATTTCTGGAGCATTACTGCTGTCAAATGTCAAACATATGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACAT GTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTGGTGATTAGAATGATATGACAATTTTTCAACATGTAATCTC TCCATAATT GTTTCTGATAAAACTT                                                        ]
[+] EMBL CA753607             [                                                                                                                                                               ACGCAGCCTCCCCTAAAGAACAACACCTACCCTCTGCCGCGTCGGCGAAGAGATGGGGAAGCACGAGTTCCTGACGCCGAAGGCGATCGCGAACAGGATCAAGGCGAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTGCCAGAAGCAGTGCCGCGACGAGAATGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGCCAGATGCAGGTGTTCGGCCAGGCCCCCGACCGAGTCGTCGAGGGCTTCTCCGAGGAGTTCCTCGACGCCTTCCTCACCTTGCTCCGCCGCGCCCACCGCCACTCCCGCATCGCCGCCACCGTCGTCTACAACGAGTTCATCGCCGACCGCCACCACGTCCACATGAACTCCACGCGCTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGGCGCGAGGGCCACTGCAAGGTTGAGGACACTCCCAAAGGGTGG TCATCACCTACATCGACCGCGACTCCGAGCAGGCCGTGAAAGGCAGGCTCAAGCGCAAGAAGATCAAGT CGACCTTGCGGAGGACGAGCNGCAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB658103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCGCAAGAGGATCAAGTCCGACCTTGCGGAGGACGAGCGGCAGGAGCGCATGATTGCACGCCAGATAGAGCGAGCCCAGCAATCCATGGGTAAAACTAATGGTGAACTTGGTGATGATGCTAGTCCGGATGGTAGCGAAGGTGAGTCCGGCAGCGAAGATGAGTATTCGGACTCAGAAAATGACCATGAGGGACAAGAGGAGGATGCAAAAGAAGCCAACAAAGCAGCAGGGAAGATTGCAATTGCACTTCAGCGGGCTGTGCCAGGGCCAAAGGTTAACCCTCTCGATGATAAGCCAAAGGTTAAATTTGGTTTTGAGGAAGAGGATGAGGTGAGCGCGCGGGATAAGGAGAAGGAAGAGTTGGCCAAGAAGAAGGGAAAGGATGCTATAAACGCAGCAGAAGCTAGGAGGTCAGCATTGGATGAGCTGATGAAGGAGGAGGAGAAAGCGAAGGAGCGGAGCAATAGGAAGGATTACTGGCTATGCCCAGGTATTGTGGTCAAGGTGATGAGCAAGTCGCTGGCAGAGAAGGGGTACTGCAAACAGAAGGGTGTGGTGAAGAGGGTGATTGATAAGTATGTTGGGGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGACAGTTAT CCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGC TTACCGGGGATCTAATGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB658104             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGATGAGGTGAGCGCGCGGGATAAGGAGAAGGAAGAGTTGGCCAAGAAGAAGGGAAAGGATGCTATAAACGCAGCAGAAGCTAGGAGGTCAGCATTGGATGAGCTGATGAAGGAGGAGGAGAAAGCGAAGGAGCGGAGCAATAGGAAGGATTACTGGCTATGCCCAGGTATTGTGGTCAAGGTGATGAGCAAGTCGCTGGCAGAGAAGGGGTACTGCAAACAGAAGGGTGTGGTGAAGAGGGTGATTGATAAGTATGTTGGGGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGACAGTTAT CCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGC TTACCGGGGATCTAATGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCAAAGTGCAGGTTG AGAAGGGCCTCTATGATGGGAAGGTTCTTAAG GCCATTGAGTACGAGGACATTTGCAAGATTTTTCACTGAGATATCATGGAATTCCA TCTTATTTCTGGAGCATTACTGCTGTCAAATGTCAAACATATGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACAT GTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTAAGGGGATTAGAATGATATG                                                                                                          ]
[+] EMBL CA767285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGGGTACTGCAAACAGAAGGGTGTGGNGAAGAGGGTGATTGATAAGTATGTTGGGGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGACAGTTAT CCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGC TTACCGGGGATCTAATGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCAAAGTGCAGGTTG AGAAGGGCCTCTATGATGGGAAGGTTCTTAAG GCCATTGAGTACGAGGACATTTGCAAGATTTTTCACTGAGATATCATGGAATTCCA TCTTATTTCTGGAGCATTACTGCTGTCAAATGTCAAACATATGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACAT GTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTGGTGATTAGAATGATATGACATTTTTTCAACATGTAATCTC TCCATAATTGGTTTCTGATAAAACTTGGTAGT                                                  ]
[+] EMBL BQ907268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACC AGATGAGCTTGAGACAGTTATCCCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGCTTTACCGGGGATCTAATGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCCAAGTGCAGGTTGTAGAAGGGCCTCTATGATGGGAAGGTTCTTAAGCGCCCTTGAGTACGAGGACATTTGCAAGATTTTTCACTGAGATATCATGGAATTCCACTCTTATTTCTGGAGCATTACTGCTGTCAAATGTCCAACATATGACTATGCAAGCCCATGTGTTGGACCTTTCTGTTAGTTGCCTGACCATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACATAGTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTGGTGATTAGAATGATATGACATTTTTTCAACAGGGAATCTCGTCCATAAGT GGTTCTGATAAAACTGGTTAGGTTACCCAATAAAATTTACTCCGCCAGTTCCTTTTTTTTTTTAAAAAAAAA]


>consensus_10505#0 CCGCCTCCCCCGCCATCCGCGTGGCCGCCTTCCCCAACCGCAGCGCTCTGAAACACAAAC TTCCCCAATCCCCAATCCCCAATCCCCCAATCTACCCCAGCTTTCTCCCGATAATTCTCT CCTCCGATTTCGCCGCCTTCCCTCCCGCTCGGGCCATCGACGCAGCCTCCCCTAAAGAAC AACACCTACCCTCTGCCGCGTCGGCGAAGAGATGGGGAAGCACGAGTTCCTGACGCCGAA GGCGATCGCGAACAGGATCAAGGCGAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGAT GTGCCAGAAGCAGTGCCGCGACGAGAATGGCTTCAAGTGCCACTGCATGTCGGAGTCGCA CCAGCGCCAGATGCAGGTGTTCGGCCAGGCCCCCGACCGAGTCGTCGAGGGCTTCTCCGA GGAGTTCCTCGACGCCTTCCTCACCTTGCTCCGCCGCGCCCACCGCCACTCCCGCATCGC CGCCACCGTCGTCTACAACGAGTTCATCGCCGACCGCCACCACGTCCACATGAACTCCAC GCGCTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGGCGCGAGGGCCACTGCAAGGT TGAGGACACTCCCAAAGGGTGGTTCATCACCTACATCGACCGCGACTCCGAGCAGGCCGT GAAGGCCAGGCTCAAGCGCAAGAGGATCAAGTCCGACCTTGCGGAGGACGAGCGGCAGGA GCGCATGATTGCACGCCAGATAGAGCGAGCCCAGCAATCCATGGGTAAAACTAATGGTGA ACTTGGTGATGATGCTAGTCCGGATGGTAGCGAAGGTGAGTCCGGCAGCGAAGATGAGTA TTCGGACTCAGAAAATGACCATGAGGGACAAGAGGAGGATGCAAAAGAAGCCAACAAAGC AGCAGGGAAGATTGCAATTGCACTTCAGCGGGCTGTGCCAGGGCCAAAGGTTAACCCTCT CGATGATAAGCCAAAGGTTAAATTTGGTTTTGAGGAAGAGGATGAGGTGAGCGCGCGGGA TAAGGAGAAGGAAGAGTTGGCCAAGAAGAAGGGAAAGGATGCTATAAACGCAGCAGAAGC TAGGAGGTCAGCATTGGATGAGCTGATGAAGGAGGAGGAGAAAGCGAAGGAGCGGAGCAA TAGGAAGGATTACTGGCTATGCCCAGGTATTGTGGTCAAGGTGATGAGCAAGTCGCTGGC AGAGAAGGGGTACTGCAAACAGAAGGGTGTGGTGAAGAGGGTGATTGATAAGTATGTTGG GGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGAC AGTTATCCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGCTTACCGGGGATCTAA TGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCAAAGTGCAGGTTGAGAAGGG CCTCTATGATGGGAAGGTTCTTAAGGCCATTGAGTACGAGGACATTTGCAAGATTTTTCA CTGAGATATCATGGAATTCCATCTTATTTCTGGAGCATTACTGCTGTCAAATGTCAAACA TATGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCT TGTGCTAGAATTTGTTCTATCGAATATCTTTCACATGTTGATGTTTCTACTTTCTAGTTC TTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTG GTGATTAGAATGATATGACATTTTTTCAACATGTAATCTCTCCATAATTGTTTCTGATAA AACTTGGTAGTTTACCCAATAAAATTTACTCCGCCAGTTCCTTTTTTTTTTTAAAAAAAA A



consensusID : consensus_10505#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence
                              [GTGAGTGGGGATGGGNGNACATCAACGGACGTGGCCNGTACCCAGGTGGAATAACCCTCATAAGGGGNACAANGNGGGGTCCCCCGCGGGGCGCCGNTNAGGAAATAAGGGAATCCCCCGGGNGCGGGGATNGGCACGGNGGGAANACAGGGGAGATTGTNCCAAANGTGCAGGTGAGGAGGGGCTNTATGGATGGGGAAGTTTTNAAGGCCATNGGAGTACGGAGGACATTGCAAGGATTTTTCAACTGGAGATATCATGGGAATTCCATCTTATTTTCTGGGAGCATTACTGGCTGTCAAATGTCAAAAACATAGGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACATGTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTGGTGATTAGAATGATATGACAATTTTTCAACATGTAATCTCTCCATAATTGTTTCTGATAAAACTTGTTAGTTACCAAATAAAATTTACTCAGCAGTTCT]

[-] EMBL BE229038             [GTGAGTGGGGATGGGNGNACATCAACGGACGTGGCCNGTACCCAGGTGGAATAACCCTCATAAGGGGNACAANGNGGGGTCCCCCGCGGGGCGCCGNTNAGGAAATAAGGGAATCCCCCGGGNGCGGGGATNGGCACGGNGGGAANACAGGGGAGATTGTNCCAAANGTGCAGGTGAGGAGGGGCTNTATGGATGGGGAAGTTTTNAAGGCCATNGGAGTACGGAGGACATTGCAAGGATTTTTCAACTGGAGATATCATGGGAATTCCATCTTATTTTCTGGGAGCATTACTGGCTGTCAAATGTCAAAAACATAGGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACATGTTGATGTTTCTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTCTTGCTTGTTTGGTGATTAGAATGATATGACAATTTTTCAACATGTAATCTCTCCATAATTGTTTCTGATAAAACTTGTTAGTTACCAAATAAAATTTACTCAGCAGTTCT]


>consensus_10505#1 GTGAGTGGGGATGGGNGNACATCAACGGACGTGGCCNGTACCCAGGTGGAATAACCCTCA TAAGGGGNACAANGNGGGGTCCCCCGCGGGGCGCCGNTNAGGAAATAAGGGAATCCCCCG GGNGCGGGGATNGGCACGGNGGGAANACAGGGGAGATTGTNCCAAANGTGCAGGTGAGGA GGGGCTNTATGGATGGGGAAGTTTTNAAGGCCATNGGAGTACGGAGGACATTGCAAGGAT TTTTCAACTGGAGATATCATGGGAATTCCATCTTATTTTCTGGGAGCATTACTGGCTGTC AAATGTCAAAAACATAGGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTG ACAATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACATGTTGATGTTT CTACTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCT TTCTTGCTTGTTTGGTGATTAGAATGATATGACAATTTTTCAACATGTAATCTCTCCATA ATTGTTTCTGATAAAACTTGTTAGTTACCAAATAAAATTTACTCAGCAGTTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10505#0      CCGCCTCCCCCGCCATCCGCGTGGCCGCCTTCCCCAACCGCAGCGCTCTGAAACACAAAC 60
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      TTCCCCAATCCCCAATCCCCAATCCCCCAATCTACCCCAGCTTTCTCCCGATAATTCTCT 120
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      CCTCCGATTTCGCCGCCTTCCCTCCCGCTCGGGCCATCGACGCAGCCTCCCCTAAAGAAC 180
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      AACACCTACCCTCTGCCGCGTCGGCGAAGAGATGGGGAAGCACGAGTTCCTGACGCCGAA 240
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      GGCGATCGCGAACAGGATCAAGGCGAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGAT 300
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      GTGCCAGAAGCAGTGCCGCGACGAGAATGGCTTCAAGTGCCACTGCATGTCGGAGTCGCA 360
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      CCAGCGCCAGATGCAGGTGTTCGGCCAGGCCCCCGACCGAGTCGTCGAGGGCTTCTCCGA 420
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      GGAGTTCCTCGACGCCTTCCTCACCTTGCTCCGCCGCGCCCACCGCCACTCCCGCATCGC 480
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      CGCCACCGTCGTCTACAACGAGTTCATCGCCGACCGCCACCACGTCCACATGAACTCCAC 540
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      GCGCTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGGCGCGAGGGCCACTGCAAGGT 600
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      TGAGGACACTCCCAAAGGGTGGTTCATCACCTACATCGACCGCGACTCCGAGCAGGCCGT 660
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      GAAGGCCAGGCTCAAGCGCAAGAGGATCAAGTCCGACCTTGCGGAGGACGAGCGGCAGGA 720
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      GCGCATGATTGCACGCCAGATAGAGCGAGCCCAGCAATCCATGGGTAAAACTAATGGTGA 780
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      ACTTGGTGATGATGCTAGTCCGGATGGTAGCGAAGGTGAGTCCGGCAGCGAAGATGAGTA 840
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      TTCGGACTCAGAAAATGACCATGAGGGACAAGAGGAGGATGCAAAAGAAGCCAACAAAGC 900
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      AGCAGGGAAGATTGCAATTGCACTTCAGCGGGCTGTGCCAGGGCCAAAGGTTAACCCTCT 960
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      CGATGATAAGCCAAAGGTTAAATTTGGTTTTGAGGAAGAGGATGAGGTGAGCGCGCGGGA 1020
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      TAAGGAGAAGGAAGAGTTGGCCAAGAAGAAGGGAAAGGATGCTATAAACGCAGCAGAAGC 1080
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      TAGGAGGTCAGCATTGGATGAGCTGATGAAGGAGGAGGAGAAAGCGAAGGAGCGGAGCAA 1140
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      TAGGAAGGATTACTGGCTATGCCCAGGTATTGTGGTCAAGGTGATGAGCAAGTCGCTGGC 1200
consensus_10505#1      ------------------------------------------------------------
                                                                                   

consensus_10505#0      AGAGAAGGGGTACTGCAAACAGAAGGGTGTGGTGAAGAGGGTGATTGATAAGTATGTTGG 1260
consensus_10505#1      -------------------------------GTGAGTGGGG--ATGGGNGNACATCAACG 27
                                                      ****   ***  ** *      **    *

consensus_10505#0      GGAGATTGAGATGCTGGAGAGCAAGCATGTTCTTAGGGTCGACCAAGATGAGCTTGAGAC 1320
consensus_10505#1      GACGTGGCCNGTACCCAGGTGGAATAACCCTCATAAGGGGNACAANGNGGGG-------- 79
                       *  *       * *    * * **  *   ** ** **   ** * *  * *        

consensus_10505#0      AGTTATCCCCCAGATTGGTGGGCTGGTGCGTATTGTTAATGGAGCTTACCGGGGATCTAA 1380
consensus_10505#1      -----TCCCCCG---CGGGGCGCCGNTNAGGA--AATAAGGGAATCCCCCGGGNG----- 124
                            ******     ** * ** * *  * *    *** ***     *****       

consensus_10505#0      TGCAAGGTTGCTTTCAGTGGACACAGAGAGATTTTGTGCCAAAGTGCAGGTTGAGAAGGG 1440
consensus_10505#1      CGGGGATNGGCACGGNGGGAANACAGGGGAGATTGTNCCAAANGTGCAGGT-GAGGAGGG 183
                        *       **     * * * **** *    **    * ** ******** *** ****

consensus_10505#0      CCTCTATG-ATGGGAAGGTTCTTAAGGCCATTG-AGTACG-AGGACATTTGCAAGATTTT 1497
consensus_10505#1      GCTNTATGGATGGGGAAGTTTTNAAGGCCATNGGAGTACGGAGGACATTGCAAGGATTTT 243
                        ** **** ***** * *** * ******** * ****** ********   * ******

consensus_10505#0      TCACT--GAGATATCATGG-AATTCCATCTTATTTCT--GGAGCATTACTG-CTGTCAAA 1551
consensus_10505#1      TCAACTGGAGATATCATGGGAATTCCATCTTATTTTCTGGGAGCATTACTGGCTGTCAAA 303
                       ***    ************ ***************    ************ ********

consensus_10505#0      TGTCAAA--CATATGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACA 1609
consensus_10505#1      TGTCAAAAACATAGGACTATGCAAGCCAATGTGTTGGACCTTTCTGTTAGTTGCCTGACA 363
                       *******  **** **********************************************

consensus_10505#0      ATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACATGTTGATGTTTCTA 1669
consensus_10505#1      ATGTATGTGCTTGTGCTAGAATTTGTTCTATCGAATATCTTTCACATGTTGATGTTTCTA 423
                       ************************************************************

consensus_10505#0      CTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTC 1729
consensus_10505#1      CTTTCTAGTTCTTCCTAGCTGCCGAAAGAACTCTGTGTAAGAAAATGGTCTGATGCTTTC 483
                       ************************************************************

consensus_10505#0      TTGCTTGTTTGGTGATTAGAATGATATGACATTTTTTCAACATGTAATCTCTCCATAATT 1789
consensus_10505#1      TTGCTTGTTTGGTGATTAGAATGATATGACAATTTTTCAACATGTAATCTCTCCATAATT 543
                       ******************************* ****************************

consensus_10505#0      GTTTCTGATAAAACTTGGTAGTTTACCCAATAAAATTTACTCCGCCAGTTCCTTTTTTTT 1849
consensus_10505#1      GTTTCTGATAAAACTTGTTAGTT-ACCAAATAAAATTTACTCAGC-AGTTCT-------- 593
                       ***************** ***** *** ************** ** *****         

consensus_10505#0      TTTAAAAAAAAA 1861
consensus_10505#1      ------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)