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Oryza sativa
cluster # 10514 cluster # 10514       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10514#0 length = 2093 sequences # 3  
 consensus_10514#1 length = 611 sequences # 3  
consensus_10514#2 length = 531 sequences # 1  
consensusID : consensus_10514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2093
fasta sequence 
                              [TTAATTATTTGTAGCCTTATAGAGAGAGAGAAGAGAAGAAGAGAGAGAGATCAGTGTGAGGCACCGACGAAGACGAAGACGAAGACGACGACGACGACAAGCACACAACAAATTTGCACACACGCGCGCGAGCATCGATGATGGCGGCCCATCATCATCATCATGAGCACCACCACCTCTTGGACATGTCGTCGCCCCCAAACGCCAGCGGCGCCATCATCTCCTCCTTCGACCACGCCGCCGGCCTCCTCTCCCTCCACGACGTCGCCGCCGCCGCCGACCACCACCACCACCACCTACGAGGAGGAGGAGGGGGTTTGCAATTGCCATCGCCGTGGTCGCAGCAGCAGGTTTCCCTCTCCCTCTACAACAACGCTGCCGGCGCAGCAGGCTCGCCGCCGTCGTCGTTGGTTGCCCATCAGCAGCTGGCGGCGGCGCAGCCATTAATGTTCCAGCTGAGGGGGTCCAAGTACCTGGGCCCTGTGAAGGCGCTGCTCGCCGAGTTCTGCAGCCTCGACGTTGAGGCCATGGATGGCGCCAAGCAGCAGAGACCTCCCAATCCCAATCCCAAGATTGGAAAGTGGGACGACGTGGAGGGTTCAGGTTCGTGGGGCAACCTGTCTCTGAGCTCCATGGACCTCCTGGATCTCGAGAGGAGGAAGGCCAGGATCTTGTCCATGG-TTGAAGAGGTGGACAGACGTTACCGGCGATACCGTGAGCAGATGAGGGCGGTGGAGGTGTCGTTCGAGGCGGTGGCCGGCGGCGGCGCGGCGCAGGTGTACACGAAGCTGGCGATGCGAGCCATGTCGCGGCACTTCCGGTGCCTGAGGGACGCGTTGGTGGGGCAGGTGCGCGCGCTGAGGAACGCCATGGGGGAGAGCCAGAGGGACGCCGCCGGCGGCGTGGCGGCGGCGGCGCCCGGTGCCACCAAGGGCGACACGCCTCGGCTGCGGGTGCTGGACCAGTGCCTGAGGCAGCAGAGGGCGTTCCAGCAGTCCGGCGCCGTCGACAGCTTCCCGTGGCGCCCGCAGCGCGGTCTGCCGGAGCACGCCGTCGCCGTCCTCCGCGCCTGGCTCTTCGAGCACTTCCTCCACCCGTATCCAAATGATGTGGACAAGCACATTTTGGCGCGCCAAACAGGCTTGTCAAGAAGCCAGGTTTCGAATTGGTTCATCAATGCAAGGGTGAGGCTATGGAAGCCTATGATAGAAGACATGTACAAGGAAGAAACGAAGCCGGAATCATCTGATGGCAACAACAAATTAAACCCTAGCGCAGCCGGCAACAAACAGCAGCATCGAGATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTCGCAGCAGCGGAAACCGTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCATCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGCAGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCAAACATTTCGTTACATTATTTGGGGATTTCTTTTGTAAAAATCAGCCCACCACTTCTGTTCTGGCCTAGCTAGCTTAGCATGCAGTGATGTGGAACCCACCCTTGCAGTCCCATCTGGGCCCATGACAAGTTAGTTACTTAGAGCACCCGCAATGGTAAAGTAAGGTGTTATCTATAAAACATGTACATCTCAGCAATAGACTAGATTAATAGTAAACCACTTCAATGGTATGTCTAC]

[+] EMBL AK101029             [TTAATTATTTGTAGCCTTATAGAGAGAGAGAAGAGAAGAAGAGAGAGAGATCAGTGTGAGGCACCGACGAAGACGAAGACGAAGACGACGACGACGACAAGCACACAACAAATTTGCACACACGCGCGCGAGCATCGATGATGGCGGCCCATCATCATCATCATGAGCACCACCACCTCTTGGACATGTCGTCGCCCCCAAACGCCAGCGGCGCCATCATCTCCTCCTTCGACCACGCCGCCGGCCTCCTCTCCCTCCACGACGTCGCCGCCGCCGCCGACCACCACCACCACCACCTACGAGGAGGAGGAGGGGGTTTGCAATTGCCATCGCCGTGGTCGCAGCAGCAGGTTTCCCTCTCCCTCTACAACAACGCTGCCGGCGCAGCAGGCTCGCCGCCGTCGTCGTTGGTTGCCCATCAGCAGCTGGCGGCGGCGCAGCCATTAATGTTCCAGCTGAGGGGGTCCAAGTACCTGGGCCCTGTGAAGGCGCTGCTCGCCGAGTTCTGCAGCCTCGACGTTGAGGCCATGGATGGCGCCAAGCAGCAGAGACCTCCCAATCCCAATCCCAAGATTGGAAAGTGGGACGACGTGGAGGGTTCAGGTTCGTGGGGCAACCTGTCTCTGAGCTCCATGGACCTCCTGGATCTCGAGAGGAGGAAGGCCAGGATCTTGTCCATGG TTGAAGAGGTGGACAGACGTTACCGGCGATACCGTGAGCAGATGAGGGCGGTGGAGGTGTCGTTCGAGGCGGTGGCCGGCGGCGGCGCGGCGCAGGTGTACACGAAGCTGGCGATGCGAGCCATGTCGCGGCACTTCCGGTGCCTGAGGGACGCGTTGGTGGGGCAGGTGCGCGCGCTGAGGAACGCCATGGGGGAGAGCCAGAGGGACGCCGCCGGCGGCGTGGCGGCGGCGGCGCCCGGTGCCACCAAGGGCGACACGCCTCGGCTGCGGGTGCTGGACCAGTGCCTGAGGCAGCAGAGGGCGTTCCAGCAGTCCGGCGCCGTCGACAGCTTCCCGTGGCGCCCGCAGCGCGGTCTGCCGGAGCACGCCGTCGCCGTCCTCCGCGCCTGGCTCTTCGAGCACTTCCTCCACCCGTATCCAAATGATGTGGACAAGCACATTTTGGCGCGCCAAACAGGCTTGTCAAGAAGCCAGGTTTCGAATTGGTTCATCAATGCAAGGGTGAGGCTATGGAAGCCTATGATAGAAGACATGTACAAGGAAGAAACGAAGCCGGAATCATCTGATGGCAACAACAAATTAAACCCTAGCGCAGCCGGCAACAAACAGCAGCATCGAGATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTCGCAGCAGCGGAAACCGTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCATCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGCAGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCAAACATTTCGTTACATTATTTGGGGATTTCTTTTGTAAAAATCAGCCCACCACTTCTGTTCTGGCCTAGCTAGCTTAGCATGCAGTGATGTGGAACCCACCCTTGCAGTCCCATCTGGGCCCATGACAAGTTAGTTACTTAGAGCACCCGCAATGGTAAAGTAAGGTGTTATCTATAAAACATGTACATCTCAGCAATAGACTAGATTAATAGTAAACCACTTCAATGGTATGTCTAC]
[+] EMBL CB659446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGGAATGGA AGGTGGACAGACGTTACCGGCGATACCGTGAGCAGATGAGGGCGGTGGAGGTGTCGTTCGAGGCGGTGGCCGGCGGCGGCGCGGCGCAGGTGTACACGAAGCTGGCGATGCGAGCCATGTCGCGGCACTTCCGGTGCCTGAGGGACGCGCTGGTGGGGCAGGTGCGCGCGCTGAGGAACGCCATGGGGGAGAGCCAGAGGGACGCCGCCGGCGGCGTGGCGGCGGCGGCGCCCGGTGCCACCAAGGGCGACACGCCTCGGCTGCGGGTGCTGGACCAGTGCCTGAGGCAGCAGAGGGCGTTCCAGCAGTCCGGCGCCGTCGACAGCTTCCCGTGGCGCCCGCAGCGCGGTCTGCCGGAGCGCGCCGTCGCCGTCCTCCGCGCCTGGCTCTTCGAGCACTTCCTCCACCCGTATCCAAATGATGTGGACAAGCACATTTTGGCGCGCCAAACAGGCTTGTCAAGAAGCCAGGTTTCGAATTGGTTCATCAATGCAAGGGTGAGGCTATGGAAGCCTATGATAGAAGACATGTACAAGGAAGAAACGAAGCCGGAATCATCTGATGGCAACAACAAATTAAACCCTAGCGCAGCCGGCAACAAACAGCAGCATCGAGATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTCGCAGCAGCGGAAACCGTAACTCCTCCTCGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB659447             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TACAAGGAAGAAACGAAGCCGGAATCATCTGATGGCAACAACAAATTAAACCCTAGGGCAGCCGGCAACAAACAGCAGCATCGAGATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTCGCAGCAGCGGAAACCGTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCATCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGCAGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCAAACATTTCGTTACATTATTTGGGGATTTCTTTgt                                                                                                                                                                                                           ]




>consensus_10514#0
TTAATTATTTGTAGCCTTATAGAGAGAGAGAAGAGAAGAAGAGAGAGAGATCAGTGTGAG
GCACCGACGAAGACGAAGACGAAGACGACGACGACGACAAGCACACAACAAATTTGCACA
CACGCGCGCGAGCATCGATGATGGCGGCCCATCATCATCATCATGAGCACCACCACCTCT
TGGACATGTCGTCGCCCCCAAACGCCAGCGGCGCCATCATCTCCTCCTTCGACCACGCCG
CCGGCCTCCTCTCCCTCCACGACGTCGCCGCCGCCGCCGACCACCACCACCACCACCTAC
GAGGAGGAGGAGGGGGTTTGCAATTGCCATCGCCGTGGTCGCAGCAGCAGGTTTCCCTCT
CCCTCTACAACAACGCTGCCGGCGCAGCAGGCTCGCCGCCGTCGTCGTTGGTTGCCCATC
AGCAGCTGGCGGCGGCGCAGCCATTAATGTTCCAGCTGAGGGGGTCCAAGTACCTGGGCC
CTGTGAAGGCGCTGCTCGCCGAGTTCTGCAGCCTCGACGTTGAGGCCATGGATGGCGCCA
AGCAGCAGAGACCTCCCAATCCCAATCCCAAGATTGGAAAGTGGGACGACGTGGAGGGTT
CAGGTTCGTGGGGCAACCTGTCTCTGAGCTCCATGGACCTCCTGGATCTCGAGAGGAGGA
AGGCCAGGATCTTGTCCATGGTTGAAGAGGTGGACAGACGTTACCGGCGATACCGTGAGC
AGATGAGGGCGGTGGAGGTGTCGTTCGAGGCGGTGGCCGGCGGCGGCGCGGCGCAGGTGT
ACACGAAGCTGGCGATGCGAGCCATGTCGCGGCACTTCCGGTGCCTGAGGGACGCGTTGG
TGGGGCAGGTGCGCGCGCTGAGGAACGCCATGGGGGAGAGCCAGAGGGACGCCGCCGGCG
GCGTGGCGGCGGCGGCGCCCGGTGCCACCAAGGGCGACACGCCTCGGCTGCGGGTGCTGG
ACCAGTGCCTGAGGCAGCAGAGGGCGTTCCAGCAGTCCGGCGCCGTCGACAGCTTCCCGT
GGCGCCCGCAGCGCGGTCTGCCGGAGCACGCCGTCGCCGTCCTCCGCGCCTGGCTCTTCG
AGCACTTCCTCCACCCGTATCCAAATGATGTGGACAAGCACATTTTGGCGCGCCAAACAG
GCTTGTCAAGAAGCCAGGTTTCGAATTGGTTCATCAATGCAAGGGTGAGGCTATGGAAGC
CTATGATAGAAGACATGTACAAGGAAGAAACGAAGCCGGAATCATCTGATGGCAACAACA
AATTAAACCCTAGCGCAGCCGGCAACAAACAGCAGCATCGAGATGATCCCAAGAAGAATT
ACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTC
GCAGCAGCGGAAACCGTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCA
TCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAG
CAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGC
AGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGC
AGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACA
GGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCC
AGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTA
ATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCAAACA
TTTCGTTACATTATTTGGGGATTTCTTTTGTAAAAATCAGCCCACCACTTCTGTTCTGGC
CTAGCTAGCTTAGCATGCAGTGATGTGGAACCCACCCTTGCAGTCCCATCTGGGCCCATG
ACAAGTTAGTTACTTAGAGCACCCGCAATGGTAAAGTAAGGTGTTATCTATAAAACATGT
ACATCTCAGCAATAGACTAGATTAATAGTAAACCACTTCAATGGTATGTCTAC

consensusID : consensus_10514#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 611
fasta sequence 
                              [CCACCACAATTAAACCTTAGCCAGCGGCAACAAACACCAGCATCGAGATGTCCCAAGAAGAATTACACGCATCTGACACGAAGCCAGCTTAGTACAACAAACAGCTACCATCTCCACCTTCGCACAGCGGAAACCGTAACTCCTCCTCTTGATGATCCCTCACAGCATCAACATCCATCGATCATCACCATGACACAGCCACCACTTTGGCGCCATAGCTATTCTTCAGCAGCAGGATTGCATCAT-GTCAT-GCGGC-CCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCA-CAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGC-AGC-ACCAGCACCAGCACC-AGCAGCAGCAGTCATTCATGGTGGA-GCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAAC-CTCATGGAGTCTCAGTTGCTGCAT-GATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCCCACCTTTCGTTACATTAAAAAAAAAAAA]

[+] EMBL BI808615             [CCACCACAATTAAACCTTAGCCAGCGGCAACAAACACCAGCATCGAGATGTCCCAAGAAGAATTACACGCATCTGACACGAAGCCAGCTTAGTACAACAAACAGCTACCATCTCCACCTTCGCACAGCGGAAACCGTAACTCCTCCTCTTGATGATCCCTCACAGCATCAACATCCATCGATCATCACCATGACACAGCCACCACTTTGGCGCCATAGCTATTCTTCAGCAGCAGGATTGCATCAT GTCAT GCGGC CCGTGTCGCTTACTCTAGGGCTCCA CAGCA CA CA CCATTTGCGGCGTCGATGATGCATCAGCATCAGC AGC ACCAGCACCAGCACC AGCAGCAGCAGTCATTCATGGTGGA GCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAAC CTCATGGAGTCTCAGTTGCTGCATCGCTTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCCCACCTTTCGTTACATTAAAAAAAAAAA ]
[+] EMBL AU056781             [                                                                                                                                                                                                                                   AGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGC AGC ACCAGCACCAGCACC AGCAGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAAC CTCATGGAGTCTCAGTTGCTGCAT GATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCAAACATTTCGTTAAA  AAAAAAAAAAAA]
[+] EMBL BI807787             [                                                                                                                                                                                                                                                                                TCTAGGGCTCCAGCA CAGCA CAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAAGCAACCAGCACCAGCACCAAGCAGCA CAGTCATTCATGGTGGA GC GCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACACTCATGGAGTCTCAGTTGCTGCAT GATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGAGATGTAGGTAATTAAATATTAaaaaaaaaa                                         ]




>consensus_10514#1
CCACCACAATTAAACCTTAGCCAGCGGCAACAAACACCAGCATCGAGATGTCCCAAGAAG
AATTACACGCATCTGACACGAAGCCAGCTTAGTACAACAAACAGCTACCATCTCCACCTT
CGCACAGCGGAAACCGTAACTCCTCCTCTTGATGATCCCTCACAGCATCAACATCCATCG
ATCATCACCATGACACAGCCACCACTTTGGCGCCATAGCTATTCTTCAGCAGCAGGATTG
CATCATGTCATGCGGCCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCACAGCCATTTG
CGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGCAGCAGCAGTCAT
TCATGGTGGAGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACCTCATGGA
GTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCCAGCTTAGCATGCA
GCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTAATTTAATTAAGGA
GATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCCCACCTTTCGTTACATTA
AAAAAAAAAAA

consensusID : consensus_10514#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 531
fasta sequence 
                              [GGAANGAGGATGGCAAGGCCAATTAAAACTAGCGCAGCCGGCAACAAGCAGCAGCATCGAGATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTCGCAGCAGCGGAAACCCTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCATCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCAGCAGCAGCAGTCATTCATGGTGGAGGCGGCTGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTNAGGNAGGCTCCANCTTANCATGCAGCTAATTTATTTGATTGTTAAAAGANATTATTGC]

[+] EMBL AA751950             [GGAANGAGGATGGCAAGGCCAATTAAAACTAGCGCAGCCGGCAACAAGCAGCAGCATCGAGATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTCGCAGCAGCGGAAACCCTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCATCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCAGCAGCAGCAGTCATTCATGGTGGAGGCGGCTGAGGAAGAAGAAGATGACGTGCTCCCTTACAGGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTNAGGNAGGCTCCANCTTANCATGCAGCTAATTTATTTGATTGTTAAAAGANATTATTGC]




>consensus_10514#2
GGAANGAGGATGGCAAGGCCAATTAAAACTAGCGCAGCCGGCAACAAGCAGCAGCATCGA
GATGATCCCAAGAAGAATTACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGC
AGCTACCATCTCCACCTTCGCAGCAGCGGAAACCCTAACTCCTCCTCGTTGATGATCCCT
GCAGCAGCATCAACATCCATCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGC
CATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACT
CTAGGGCTCCAGCAGCAGCAGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAG
CAGCAGCAGCAGTCATTCATGGTGGAGGCGGCTGAGGAAGAAGAAGATGACGTGCTCCCT
TACAGGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTNAGGNAGG
CTCCANCTTANCATGCAGCTAATTTATTTGATTGTTAAAAGANATTATTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10514#0      TTAATTATTTGTAGCCTTATAGAGAGAGAGAAGAGAAGAAGAGAGAGAGATCAGTGTGAG 60
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      GCACCGACGAAGACGAAGACGAAGACGACGACGACGACAAGCACACAACAAATTTGCACA 120
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      CACGCGCGCGAGCATCGATGATGGCGGCCCATCATCATCATCATGAGCACCACCACCTCT 180
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      TGGACATGTCGTCGCCCCCAAACGCCAGCGGCGCCATCATCTCCTCCTTCGACCACGCCG 240
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      CCGGCCTCCTCTCCCTCCACGACGTCGCCGCCGCCGCCGACCACCACCACCACCACCTAC 300
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      GAGGAGGAGGAGGGGGTTTGCAATTGCCATCGCCGTGGTCGCAGCAGCAGGTTTCCCTCT 360
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      CCCTCTACAACAACGCTGCCGGCGCAGCAGGCTCGCCGCCGTCGTCGTTGGTTGCCCATC 420
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      AGCAGCTGGCGGCGGCGCAGCCATTAATGTTCCAGCTGAGGGGGTCCAAGTACCTGGGCC 480
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      CTGTGAAGGCGCTGCTCGCCGAGTTCTGCAGCCTCGACGTTGAGGCCATGGATGGCGCCA 540
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      AGCAGCAGAGACCTCCCAATCCCAATCCCAAGATTGGAAAGTGGGACGACGTGGAGGGTT 600
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      CAGGTTCGTGGGGCAACCTGTCTCTGAGCTCCATGGACCTCCTGGATCTCGAGAGGAGGA 660
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      AGGCCAGGATCTTGTCCATGGTTGAAGAGGTGGACAGACGTTACCGGCGATACCGTGAGC 720
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      AGATGAGGGCGGTGGAGGTGTCGTTCGAGGCGGTGGCCGGCGGCGGCGCGGCGCAGGTGT 780
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      ACACGAAGCTGGCGATGCGAGCCATGTCGCGGCACTTCCGGTGCCTGAGGGACGCGTTGG 840
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      TGGGGCAGGTGCGCGCGCTGAGGAACGCCATGGGGGAGAGCCAGAGGGACGCCGCCGGCG 900
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      GCGTGGCGGCGGCGGCGCCCGGTGCCACCAAGGGCGACACGCCTCGGCTGCGGGTGCTGG 960
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      ACCAGTGCCTGAGGCAGCAGAGGGCGTTCCAGCAGTCCGGCGCCGTCGACAGCTTCCCGT 1020
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      GGCGCCCGCAGCGCGGTCTGCCGGAGCACGCCGTCGCCGTCCTCCGCGCCTGGCTCTTCG 1080
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      AGCACTTCCTCCACCCGTATCCAAATGATGTGGACAAGCACATTTTGGCGCGCCAAACAG 1140
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      GCTTGTCAAGAAGCCAGGTTTCGAATTGGTTCATCAATGCAAGGGTGAGGCTATGGAAGC 1200
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      CTATGATAGAAGACATGTACAAGGAAGAAACGAAGCCGGAATCATCTGATGGCAACAACA 1260
consensus_10514#2      -------------------------------------GGAANGAG--GATGGCAAGGCCA 21
consensus_10514#1      ----------------------------------------------------CCACCACA 8
                                                                           * *   **

consensus_10514#0      AATTAAACCCTAGCGCAGCCGGCAACAAACAGCAGCATCGAGATGATCCCAAGAAGAATT 1320
consensus_10514#2      ATTAAAA--CTAGCGCAGCCGGCAACAAGCAGCAGCATCGAGATGATCCCAAGAAGAATT 79
consensus_10514#1      ATTAAACC-TTAGC-CAGC-GGCAACAAACACCAGCATCGAGATG-TCCCAAGAAGAATT 64
                       * * **    **** **** ******** ** ************* **************

consensus_10514#0      ACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTC 1380
consensus_10514#2      ACACGGCAACGACAGCAGAAGCCAGCTTAGTACAACAAAGCAGCTACCATCTCCACCTTC 139
consensus_10514#1      ACACGCATCTGACAC--GAAGCCAGCTTAGTACAACAAA-CAGCTACCATCTCCACCTTC 121
                       *****     ****   ********************** ********************

consensus_10514#0      GCAGCAGCGGAAACCGTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCA 1440
consensus_10514#2      GCAGCAGCGGAAACCCTAACTCCTCCTCGTTGATGATCCCTGCAGCAGCATCAACATCCA 199
consensus_10514#1      GCA-CAGCGGAAACCGTAACTCCTCCTC-TTGATGATCCCT--CACAGCATCAACATCCA 177
                       *** *********** ************ ************    ***************

consensus_10514#0      TCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAG 1500
consensus_10514#2      TCGATCATCACCATGACAGCAGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAG 259
consensus_10514#1      TCGATCATCACCATGACA-CAGCCACCAC---TTTGGCG-CCATAGCTATTCTTCAGCAG 232
                       ****************** *********    ** **** ********************

consensus_10514#0      CAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGC 1560
consensus_10514#2      CAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGC 319
consensus_10514#1      CAGGATTGCATCATG-TCATG-CGGC-CCGTGTCGCTTACTCTAGGGCTCCAGCAGCAGC 289
                       *************** ***** **** *********************************

consensus_10514#0      AGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGC 1620
consensus_10514#2      AGCAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGC---------------AGC 364
consensus_10514#1      A-CAGCCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGC 348
                       * ****************************************               ***

consensus_10514#0      AGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACA 1680
consensus_10514#2      AGCAGCAGTCATTCATGGTGGAGGCGGCTGAGGAAGAAGAAGATGACGTGCTCCCTTACA 424
consensus_10514#1      AGCAGCAGTCATTCATGGTGGAG-CGGCGGAGGAAGAAGAAGATGACGTGCTCCCTTACA 407
                       *********************** **** *******************************

consensus_10514#0      GGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCC 1740
consensus_10514#2      GGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTNAGGNAGGCTCC 484
consensus_10514#1      GGAACCTCATGGAGTCTCAGTTGCTGCATGATTTTGCAGGAGCTAGCTAAGGCAGGCTCC 467
                       ************************************************ *** *******

consensus_10514#0      AGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTA 1800
consensus_10514#2      ANCTTANCATGCAGCTAATTTATTTGATTGTTAAAAGANATTATTGC------------- 531
consensus_10514#1      AGCTTAGCATGCAGCTAATTTATTTGATTGTTAAAGGAGATTATTGCGCTCAAAAGTTTA 527
                       * **** **************************** ** ********             

consensus_10514#0      ATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCAAACA 1860
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ATTTAATTAAGGAGATGTAGGTAATTAAATATTACATTATTGTTCTTTTATGACCCCACC 587
                                                                                   

consensus_10514#0      TTTCGTTACATTATTTGGGGATTTCTTTTGTAAAAATCAGCCCACCACTTCTGTTCTGGC 1920
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      TTTCGTTACATTAAAAAAAAAAAA------------------------------------ 611
                                                                                   

consensus_10514#0      CTAGCTAGCTTAGCATGCAGTGATGTGGAACCCACCCTTGCAGTCCCATCTGGGCCCATG 1980
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      ACAAGTTAGTTACTTAGAGCACCCGCAATGGTAAAGTAAGGTGTTATCTATAAAACATGT 2040
consensus_10514#2      ------------------------------------------------------------
consensus_10514#1      ------------------------------------------------------------
                                                                                   

consensus_10514#0      ACATCTCAGCAATAGACTAGATTAATAGTAAACCACTTCAATGGTATGTCTAC 2093
consensus_10514#2      -----------------------------------------------------
consensus_10514#1      -----------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)