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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10516#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2905 fasta sequence
[AAAAAAATTCCAAAAAAAAAGAGAAAAAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGAGGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGGAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTAAGCTGCTTTTGCCTAACAAGCGTACCTGTAAAAAAATGCATTTTTTTTACCGTTGTAAGAGCCCAGCAGAGTTATAATACATCAAAGAATGAAATAAAGATAGAAACACTTACTACACACAACAGGAGAGCATCTACGATTCAAAAGATATATTTTTTCCCCCAAGGAATGGTTGGTTCTTGTTTACAAAAAGAGAATCCAAATGCCATCCATAACATTGCACAGTTCATAAGCCAATCTAGTGAAAGGAGCAAATATATTGTTTGATTGGACTAGAAAATATGATGATTAGTTTTTAGTTTTCTTATTCTGGGTGCGAATCTTGTGTTAACTTCCTGATCTGCTAATATTCTATATGAATTGTTATTATTACTCCCTCCAGTCAATAATATTTGACGTTAGTGCTACTACTACTACTACTAATCTTAGCTATCCCAACACAAAATGTTATTGATTAGTTGGGGTATTATTATTATTTCAAAATGCTTGAAATGAAAGGGCAATAGGCTGTCTATCTCGTTCTCAAATCTGTGGCAATTAGGTTTGACTATGCCTCTTCCAGCACAGATGTGTCTGAGGCTGTGATGGTGGATTTGGGATGAAGTCCTATAGGAAGGTTATTCAGAGGATTGATTTTTTGTTTGAAACATTGTAGAAGCCCTGAATAAATAGAGCAAGATTCTTGTATGGTCAGTCACTTGGACTTGTGTTATGCCAACATACATTGTGGTGCACCGTTGTTCTCTTAGGCCAAGCATTGGGATGTGAAGGAGATTGTTGCCTACGGTGATTGTTTTATGCTAAGTTCTTGCATGAACTAAGAATGGAAGCATACTGATTTCCATCATAGATCAACGTTCTACCTTTCAATGTCATGGACATTGGCTGGTTTTCTTACATACATGGGTAGCGTTCTGCAGGTTAAAATCATCTATACATTTAGTTGAATAGCTGCATGTTTGTAAATGTTATTTATATGCGGAACTGCTGCATAATTTACTCACACAACTGCTGAAGTTATGTTTTCGTCATGAAACTAGTCATTGGATGAAATTTGGTGTTTGTGTTTGTGTTGAAAGTTGATCCATTTTTATGGTTTCATTGAATGTAATACCAAATCTTTCACTTTTATGCTTACTAAAACTAGTGGAGGGCAAAAGATTTCTTTTACCTTAGCATTTTATTATTTGTGATTGGCCAGTCAGTTGGAAGTGGAAATGAATCTTAGTGGAATGAGTTTCTGATGTTACTTCCCTCTATTGTTCAGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACGGTCTGAGGAAGTGTCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAATTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCATATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAGGCTTCTCAAGGTT]
[+] EMBL CB677321 [AAAAAAATTCCAAAAAAAAAGAGAAAAAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGAGGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGGAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGT ]
[+] EMBL AK100398 [ CAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTAAGCTGCTTTTGCCTAACAAGCGTACCTGTAAAAAAATGCATTTTTTTTACCGTTGTAAGAGCCCAGCAGAGTTATAATACATCAAAGAATGAAATAAAGATAGAAACACTTACTACACACAACAGGAGAGCATCTACGATTCAAAAGATATATTTTTTCCCCCAAGGAATGGTTGGTTCTTGTTTACAAAAAGAGAATCCAAATGCCATCCATAACATTGCACAGTTCATAAGCCAATCTAGTGAAAGGAGCAAATATATTGTTTGATTGGACTAGAAAATATGATGATTAGTTTTTAGTTTTCTTATTCTGGGTGCGAATCTTGTGTTAACTTCCTGATCTGCTAATATTCTATATGAATTGTTATTATTACTCCCTCCAGTCAATAATATTTGACGTTAGTGCTACTACTACTACTACTAATCTTAGCTATCCCAACACAAAATGTTATTGATTAGTTGGGGTATTATTATTATTTCAAAATGCTTGAAATGAAAGGGCAATAGGCTGTCTATCTCGTTCTCAAATCTGTGGCAATTAGGTTTGACTATGCCTCTTCCAGCACAGATGTGTCTGAGGCTGTGATGGTGGATTTGGGATGAAGTCCTATAGGAAGGTTATTCAGAGGATTGATTTTTTGTTTGAAACATTGTAGAAGCCCTGAATAAATAGAGCAAGATTCTTGTATGGTCAGTCACTTGGACTTGTGTTATGCCAACATACATTGTGGTGCACCGTTGTTCTCTTAGGCCAAGCATTGGGATGTGAAGGAGATTGTTGCCTACGGTGATTGTTTTATGCTAAGTTCTTGCATGAACTAAGAATGGAAGCATACTGATTTCCATCATAGATCAACGTTCTACCTTTCAATGTCATGGACATTGGCTGGTTTTCTTACATACATGGGTAGCGTTCTGCAGGTTAAAATCATCTATACATTTAGTTGAATAGCTGCATGTTTGTAAATGTTATTTATATGCGGAACTGCTGCATAATTTACTCACACAACTGCTGAAGTTATGTTTTCGTCATGAAACTAGTCATTGGATGAAATTTGGTGTTTGTGTTTGTGTTGAAAGTTGATCCATTTTTATGGTTTCATTGAATGTAATACCAAATCTTTCACTTTTATGCTTACTAAAACTAGTGGAGGGCAAAAGATTTCTTTTACCTTAGCATTTTATTATTTGTGATTGGCCAGTCAGTTGGAAGTGGAAATGAATCTTAGTGGAATGAGTTTCTGATGTTACTTCCCTCTATTGTTCAGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACGGTCTGAGGAAGTGTCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAATTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCATATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAGGCTTCTCAAGGTT]
[+] EMBL CA765545 [ CCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAATTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCATATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAAGCTTTTCAAGGTT]
consensusID : consensus_10516#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 995 fasta sequence
[TTCCCCTTTAACACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCCCGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGCGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGACATGAGCTCTCCAAACATCTTCCTAGGAAATGGACTGTCTGAGGAAGTGTCAACTGCACGCATTGAACAAAGTTCATACCAGTTTACAGATGACATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATCGAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGA]
[+] EMBL CB655811 [TTCCCCTTTAACACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCCCGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGCGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGACATGAGCTCTCCAAACATCTTCCTAGGAAATGGACTGTCTGAGGAAGTGTCAACTGCACGCATTGAACAAAGTTCATACCAGTTTACAGATGACATGCGAA ]
[+] EMBL CB678366 [ ACTTCCCTTGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACTGTCTGAGGAAGTGTCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATCGAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGA]
consensusID : consensus_10516#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 798 fasta sequence
[AAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAGG]
[+] EMBL CB651715 [AAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAGG]
consensusID : consensus_10516#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 570 fasta sequence
[AAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGTATGTTGTTTTAGCCACTGTTATTTGTGTCGTTATTTGTTAAGATCATTAATTTCTTTTTGCATCACATTGAACTTTTTTCCTTTACTTCCTTTATTTCTGGCAATTTTTTCTGTATCCATCTTCTAAATCTGTAGCATGTTTTCACATTCTTATTCAATGGCTTCCAAATATCACTTTAGAATGAATTCTGGGAAGTGTAGCTGTTTGAGCTACCATATAATAAGATCAATAATTGTATGACCTTCATTTAAGACTAGTTTATTTATGGACTTGATA]
[+] EMBL CF303964 [AAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGTATGTTGTTTTAGCCACTGTTATTTGTGTCGTTATTTGTTAAGATCATTAATTTCTTTTTGCATCACATTGAACTTTTTTCCTTTACTTCCTTTATTTCTGGCAATTTTTTCTGTATCCATCTTCTAAATCTGTAGCATGTTTTCACATTCTTATTCAATGGCTTCCAAATATCACTTTAGAATGAATTCTGGGAAGTGTAGCTGTTTGAGCTACCATATAATAAGATCAATAATTGTATGACCTTCATTTAAGACTAGTTTATTTATGGACTTGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10516#1 TTCCCCTTTAACACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCC 60
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 TTCCTCGCGGCCGGCATCCCCGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGG 120
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 CCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAG 180
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 AAGGTAGCCGCGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGA 240
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 CCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGA 300
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 AGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTG 360
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ----------------------------------AAAAAAATTCCAAAAAAAAAGAGAAA 26
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 GGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGC 420
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 AAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGA 86
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 GATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAAC 480
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGC 146
consensus_10516#2 ----------AAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGC 50
consensus_10516#1 ATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGACATGAGCTCTCCAAACATCTTCCTA 540
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGG 206
consensus_10516#2 GGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGG 110
consensus_10516#1 GGAAATGGACTGTCTGAGGAAGTGTCAACTGCACGCATTGAACAAAGTTCATACCAGTTT 600
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGC 266
consensus_10516#2 GGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGC 170
consensus_10516#1 ACAGATGACATGCGAAACAT-GTCATATAATCGTTCCGATAATGAGCACGGATTCTT--T 657
consensus_10516#3 -------AAATGCGAAACAT-GTCATATAATCGTTCCGATAATGAGCACGGATTCTT--T 50
consensus_10516#0 GGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGA-GGCGTCCACGTGCTCGTCGT 325
consensus_10516#2 GGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGA-GGCGTCCACGTGCTCGTCGT 229
* ** ** *** * * * *** * **** ** * *
consensus_10516#1 TGGGGCGAGCTTCAGAGA--AGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAA 715
consensus_10516#3 TGGGGCGAGCTTCAGAGA--AGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAA 108
consensus_10516#0 CGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCT 385
consensus_10516#2 CGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCT 289
* * **** * * * * * ** ** * *** *** *
consensus_10516#1 CATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTG-CTCGATTCA 774
consensus_10516#3 CATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTG-CTCGATTCA 167
consensus_10516#0 TCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGC-CGGCGACGAGCGGCGCGACATG 444
consensus_10516#2 TCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGC-CGGCGACGAGCGGCGCGACATG 348
** ** * ** ** *** ** * * * ** ** * * ***
consensus_10516#1 CTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTA 834
consensus_10516#3 CTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTA 227
consensus_10516#0 GCGT----GGCTGCTGGACGCCTTCGGCACCG-CCACGATCGACCAGGTGGACTCCGCCT 499
consensus_10516#2 GCGT----GGCTGCTGGACGCCTTCGGCACCG-CCACGATCGACCAGGTGGACTCCGCCT 403
** *** ** * * *** * ** * **** *
consensus_10516#1 GTTAAGAGGCTG-CAGTCATTCAATTCTC----CCATCACATCGAACAATCAAGAAAAAC 889
consensus_10516#3 GTTAAGAGGCTG-CAGTCATTCAATTCTC----CCATCACATCGAACAATCAAGAAAAAC 282
consensus_10516#0 ACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAA 559
consensus_10516#2 ACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAA 463
***** * * * * * * *** ** ** * **
consensus_10516#1 CAAAAAATGGGAATGGGTATCAAGAATT-----TCGTACTGTCGCTGG---AAGGCATTA 941
consensus_10516#3 CAAAAAATGGTATGTTGTTTTAGCCACTGTTATTTGTGTCGTTATTTG---TTAAGATCA 339
consensus_10516#0 CGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCA 619
consensus_10516#2 CGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCA 523
* * * * * *
consensus_10516#1 TGATACAATCGAAACATATTATCAGAAAGCTG-CCATGGCATATTCCAAAGGAGA----- 995
consensus_10516#3 TTAATTTCTTTTTGCATCACATTGAACTTTTTTCCTTTACTTCCTTTATTTCTGGCAATT 399
consensus_10516#0 GGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACG 679
consensus_10516#2 GGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACG 583
* * * * *
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 TTTTCTGTATC-CATCTTCTAAATCTGTAGCATGTTTTCACATTCTTATTCAATGGCTTC 458
consensus_10516#0 TGATCGGTAAGGCGTACACGCGACCTGCCACTT-CGCCCGTAAACAAAACGAACG-CGTG 737
consensus_10516#2 TGATCGGTAAGGCGTACACGCGACCTGCCACTT-CGCCCGTAAACAAAACGAACG-CGTG 641
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 CAAATATCACTTTAGAATGAATTCTGGGAAGTGTAGCTGTTTGAGCTACCATATAATAAG 518
consensus_10516#0 GAAGGGCAACGCTTGGGAGGACGGAAGTGGTGGCGACCGCAAGTA-TAGTGTTGAAGAGG 796
consensus_10516#2 GAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTA-TAGTGTTGAAGAGG 700
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ATCAATAATTG-TATGACCTTCATTTAAGACTAGTTTATTTATGGACTTGATA------- 570
consensus_10516#0 CCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCA 856
consensus_10516#2 CCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCA 760
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GAGACGTGCTCGGTAAGCTGCTTTTGCCTAACAAGCGTACCTGTAAAAAAATGCATTTTT 916
consensus_10516#2 GAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAGG---------------------- 798
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TTTACCGTTGTAAGAGCCCAGCAGAGTTATAATACATCAAAGAATGAAATAAAGATAGAA 976
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ACACTTACTACACACAACAGGAGAGCATCTACGATTCAAAAGATATATTTTTTCCCCCAA 1036
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GGAATGGTTGGTTCTTGTTTACAAAAAGAGAATCCAAATGCCATCCATAACATTGCACAG 1096
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TTCATAAGCCAATCTAGTGAAAGGAGCAAATATATTGTTTGATTGGACTAGAAAATATGA 1156
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TGATTAGTTTTTAGTTTTCTTATTCTGGGTGCGAATCTTGTGTTAACTTCCTGATCTGCT 1216
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 AATATTCTATATGAATTGTTATTATTACTCCCTCCAGTCAATAATATTTGACGTTAGTGC 1276
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TACTACTACTACTACTAATCTTAGCTATCCCAACACAAAATGTTATTGATTAGTTGGGGT 1336
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ATTATTATTATTTCAAAATGCTTGAAATGAAAGGGCAATAGGCTGTCTATCTCGTTCTCA 1396
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 AATCTGTGGCAATTAGGTTTGACTATGCCTCTTCCAGCACAGATGTGTCTGAGGCTGTGA 1456
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TGGTGGATTTGGGATGAAGTCCTATAGGAAGGTTATTCAGAGGATTGATTTTTTGTTTGA 1516
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 AACATTGTAGAAGCCCTGAATAAATAGAGCAAGATTCTTGTATGGTCAGTCACTTGGACT 1576
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TGTGTTATGCCAACATACATTGTGGTGCACCGTTGTTCTCTTAGGCCAAGCATTGGGATG 1636
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TGAAGGAGATTGTTGCCTACGGTGATTGTTTTATGCTAAGTTCTTGCATGAACTAAGAAT 1696
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GGAAGCATACTGATTTCCATCATAGATCAACGTTCTACCTTTCAATGTCATGGACATTGG 1756
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 CTGGTTTTCTTACATACATGGGTAGCGTTCTGCAGGTTAAAATCATCTATACATTTAGTT 1816
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GAATAGCTGCATGTTTGTAAATGTTATTTATATGCGGAACTGCTGCATAATTTACTCACA 1876
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 CAACTGCTGAAGTTATGTTTTCGTCATGAAACTAGTCATTGGATGAAATTTGGTGTTTGT 1936
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GTTTGTGTTGAAAGTTGATCCATTTTTATGGTTTCATTGAATGTAATACCAAATCTTTCA 1996
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 CTTTTATGCTTACTAAAACTAGTGGAGGGCAAAAGATTTCTTTTACCTTAGCATTTTATT 2056
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ATTTGTGATTGGCCAGTCAGTTGGAAGTGGAAATGAATCTTAGTGGAATGAGTTTCTGAT 2116
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GTTACTTCCCTCTATTGTTCAGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCA 2176
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCT 2236
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 CAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACGGTCTGAGGAAGTG 2296
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCA 2356
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTG 2416
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 AAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATA 2476
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATAT 2536
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCC 2596
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACT 2656
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 GTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATAT 2716
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAA 2776
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 TTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCAT 2836
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#0 ATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAGGCTT 2896
consensus_10516#2 ------------------------------------------------------------
consensus_10516#1 ---------
consensus_10516#3 ---------
consensus_10516#0 CTCAAGGTT 2905
consensus_10516#2 ---------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||