These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10516#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2905 fasta sequence [AAAAAAATTCCAAAAAAAAAGAGAAAAAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGAGGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGGAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTAAGCTGCTTTTGCCTAACAAGCGTACCTGTAAAAAAATGCATTTTTTTTACCGTTGTAAGAGCCCAGCAGAGTTATAATACATCAAAGAATGAAATAAAGATAGAAACACTTACTACACACAACAGGAGAGCATCTACGATTCAAAAGATATATTTTTTCCCCCAAGGAATGGTTGGTTCTTGTTTACAAAAAGAGAATCCAAATGCCATCCATAACATTGCACAGTTCATAAGCCAATCTAGTGAAAGGAGCAAATATATTGTTTGATTGGACTAGAAAATATGATGATTAGTTTTTAGTTTTCTTATTCTGGGTGCGAATCTTGTGTTAACTTCCTGATCTGCTAATATTCTATATGAATTGTTATTATTACTCCCTCCAGTCAATAATATTTGACGTTAGTGCTACTACTACTACTACTAATCTTAGCTATCCCAACACAAAATGTTATTGATTAGTTGGGGTATTATTATTATTTCAAAATGCTTGAAATGAAAGGGCAATAGGCTGTCTATCTCGTTCTCAAATCTGTGGCAATTAGGTTTGACTATGCCTCTTCCAGCACAGATGTGTCTGAGGCTGTGATGGTGGATTTGGGATGAAGTCCTATAGGAAGGTTATTCAGAGGATTGATTTTTTGTTTGAAACATTGTAGAAGCCCTGAATAAATAGAGCAAGATTCTTGTATGGTCAGTCACTTGGACTTGTGTTATGCCAACATACATTGTGGTGCACCGTTGTTCTCTTAGGCCAAGCATTGGGATGTGAAGGAGATTGTTGCCTACGGTGATTGTTTTATGCTAAGTTCTTGCATGAACTAAGAATGGAAGCATACTGATTTCCATCATAGATCAACGTTCTACCTTTCAATGTCATGGACATTGGCTGGTTTTCTTACATACATGGGTAGCGTTCTGCAGGTTAAAATCATCTATACATTTAGTTGAATAGCTGCATGTTTGTAAATGTTATTTATATGCGGAACTGCTGCATAATTTACTCACACAACTGCTGAAGTTATGTTTTCGTCATGAAACTAGTCATTGGATGAAATTTGGTGTTTGTGTTTGTGTTGAAAGTTGATCCATTTTTATGGTTTCATTGAATGTAATACCAAATCTTTCACTTTTATGCTTACTAAAACTAGTGGAGGGCAAAAGATTTCTTTTACCTTAGCATTTTATTATTTGTGATTGGCCAGTCAGTTGGAAGTGGAAATGAATCTTAGTGGAATGAGTTTCTGATGTTACTTCCCTCTATTGTTCAGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACGGTCTGAGGAAGTGTCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAATTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCATATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAGGCTTCTCAAGGTT] [+] EMBL CB677321 [AAAAAAATTCCAAAAAAAAAGAGAAAAAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGAGGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGGAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGT ] [+] EMBL AK100398 [ CAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTAAGCTGCTTTTGCCTAACAAGCGTACCTGTAAAAAAATGCATTTTTTTTACCGTTGTAAGAGCCCAGCAGAGTTATAATACATCAAAGAATGAAATAAAGATAGAAACACTTACTACACACAACAGGAGAGCATCTACGATTCAAAAGATATATTTTTTCCCCCAAGGAATGGTTGGTTCTTGTTTACAAAAAGAGAATCCAAATGCCATCCATAACATTGCACAGTTCATAAGCCAATCTAGTGAAAGGAGCAAATATATTGTTTGATTGGACTAGAAAATATGATGATTAGTTTTTAGTTTTCTTATTCTGGGTGCGAATCTTGTGTTAACTTCCTGATCTGCTAATATTCTATATGAATTGTTATTATTACTCCCTCCAGTCAATAATATTTGACGTTAGTGCTACTACTACTACTACTAATCTTAGCTATCCCAACACAAAATGTTATTGATTAGTTGGGGTATTATTATTATTTCAAAATGCTTGAAATGAAAGGGCAATAGGCTGTCTATCTCGTTCTCAAATCTGTGGCAATTAGGTTTGACTATGCCTCTTCCAGCACAGATGTGTCTGAGGCTGTGATGGTGGATTTGGGATGAAGTCCTATAGGAAGGTTATTCAGAGGATTGATTTTTTGTTTGAAACATTGTAGAAGCCCTGAATAAATAGAGCAAGATTCTTGTATGGTCAGTCACTTGGACTTGTGTTATGCCAACATACATTGTGGTGCACCGTTGTTCTCTTAGGCCAAGCATTGGGATGTGAAGGAGATTGTTGCCTACGGTGATTGTTTTATGCTAAGTTCTTGCATGAACTAAGAATGGAAGCATACTGATTTCCATCATAGATCAACGTTCTACCTTTCAATGTCATGGACATTGGCTGGTTTTCTTACATACATGGGTAGCGTTCTGCAGGTTAAAATCATCTATACATTTAGTTGAATAGCTGCATGTTTGTAAATGTTATTTATATGCGGAACTGCTGCATAATTTACTCACACAACTGCTGAAGTTATGTTTTCGTCATGAAACTAGTCATTGGATGAAATTTGGTGTTTGTGTTTGTGTTGAAAGTTGATCCATTTTTATGGTTTCATTGAATGTAATACCAAATCTTTCACTTTTATGCTTACTAAAACTAGTGGAGGGCAAAAGATTTCTTTTACCTTAGCATTTTATTATTTGTGATTGGCCAGTCAGTTGGAAGTGGAAATGAATCTTAGTGGAATGAGTTTCTGATGTTACTTCCCTCTATTGTTCAGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACGGTCTGAGGAAGTGTCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAATTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCATATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAGGCTTCTCAAGGTT] [+] EMBL CA765545 [ CCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAATTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCATATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAAGCTTTTCAAGGTT] consensusID : consensus_10516#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 995 fasta sequence [TTCCCCTTTAACACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCCCGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGCGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGACATGAGCTCTCCAAACATCTTCCTAGGAAATGGACTGTCTGAGGAAGTGTCAACTGCACGCATTGAACAAAGTTCATACCAGTTTACAGATGACATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATCGAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGA] [+] EMBL CB655811 [TTCCCCTTTAACACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCCCGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGCGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGACATGAGCTCTCCAAACATCTTCCTAGGAAATGGACTGTCTGAGGAAGTGTCAACTGCACGCATTGAACAAAGTTCATACCAGTTTACAGATGACATGCGAA ] [+] EMBL CB678366 [ ACTTCCCTTGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACTGTCTGAGGAAGTGTCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACTGTCGCTGGAAGGCATTATGATACAATCGAAACATATTATCAGAAAGCTGCCATGGCATATTCCAAAGGAGA] consensusID : consensus_10516#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 798 fasta sequence [AAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAGG] [+] EMBL CB651715 [AAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGACCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAGG] consensusID : consensus_10516#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 570 fasta sequence [AAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGTATGTTGTTTTAGCCACTGTTATTTGTGTCGTTATTTGTTAAGATCATTAATTTCTTTTTGCATCACATTGAACTTTTTTCCTTTACTTCCTTTATTTCTGGCAATTTTTTCTGTATCCATCTTCTAAATCTGTAGCATGTTTTCACATTCTTATTCAATGGCTTCCAAATATCACTTTAGAATGAATTCTGGGAAGTGTAGCTGTTTGAGCTACCATATAATAAGATCAATAATTGTATGACCTTCATTTAAGACTAGTTTATTTATGGACTTGATA] [+] EMBL CF303964 [AAATGCGAAACATGTCATATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCCATCACATCGAACAATCAAGAAAAACCAAAAAATGGTATGTTGTTTTAGCCACTGTTATTTGTGTCGTTATTTGTTAAGATCATTAATTTCTTTTTGCATCACATTGAACTTTTTTCCTTTACTTCCTTTATTTCTGGCAATTTTTTCTGTATCCATCTTCTAAATCTGTAGCATGTTTTCACATTCTTATTCAATGGCTTCCAAATATCACTTTAGAATGAATTCTGGGAAGTGTAGCTGTTTGAGCTACCATATAATAAGATCAATAATTGTATGACCTTCATTTAAGACTAGTTTATTTATGGACTTGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10516#1 TTCCCCTTTAACACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCC 60 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ------------------------------------------------------------ consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 TTCCTCGCGGCCGGCATCCCCGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGG 120 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ------------------------------------------------------------ consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 CCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAG 180 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ------------------------------------------------------------ consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 AAGGTAGCCGCGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGCGTACACGCGA 240 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ------------------------------------------------------------ consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 CCTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGA 300 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ------------------------------------------------------------ consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 AGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCGAGCAGTTCCTGTGCTCTATGCTG 360 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ----------------------------------AAAAAAATTCCAAAAAAAAAGAGAAA 26 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 GGGGATAATTCGGAGCTTGGCATGGGTGTGGTCAGAGACGTGCTCGGTCAATATGGATGC 420 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 AAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGA 86 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 GATGTTGAGAAGGCTCTGGATGCATTACTTGATATCTCGGGTATGTCTTCCCTTCAAAAC 480 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGC 146 consensus_10516#2 ----------AAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGC 50 consensus_10516#1 ATGGAAAGGTGTTTCCCGAATGCTCAAATAAATGACATGAGCTCTCCAAACATCTTCCTA 540 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGG 206 consensus_10516#2 GGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGG 110 consensus_10516#1 GGAAATGGACTGTCTGAGGAAGTGTCAACTGCACGCATTGAACAAAGTTCATACCAGTTT 600 consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGC 266 consensus_10516#2 GGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGC 170 consensus_10516#1 ACAGATGACATGCGAAACAT-GTCATATAATCGTTCCGATAATGAGCACGGATTCTT--T 657 consensus_10516#3 -------AAATGCGAAACAT-GTCATATAATCGTTCCGATAATGAGCACGGATTCTT--T 50 consensus_10516#0 GGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGA-GGCGTCCACGTGCTCGTCGT 325 consensus_10516#2 GGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGA-GGCGTCCACGTGCTCGTCGT 229 * ** ** *** * * * *** * **** ** * * consensus_10516#1 TGGGGCGAGCTTCAGAGA--AGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAA 715 consensus_10516#3 TGGGGCGAGCTTCAGAGA--AGCTACTTGAAGGTTGCATGTGAGGAGCCCCACTCAACAA 108 consensus_10516#0 CGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCT 385 consensus_10516#2 CGTCGTCGGCTTTCAACCCCGGGTCGTCGGGGGCGGCCTCGACCTCCTCCCTCTCCGCCT 289 * * **** * * * * * ** ** * *** *** * consensus_10516#1 CATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTG-CTCGATTCA 774 consensus_10516#3 CATCATCTACAAGATCAACAAGCTCGATATCTAAGACACCACAACAAGTG-CTCGATTCA 167 consensus_10516#0 TCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGC-CGGCGACGAGCGGCGCGACATG 444 consensus_10516#2 TCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGC-CGGCGACGAGCGGCGCGACATG 348 ** ** * ** ** *** ** * * * ** ** * * *** consensus_10516#1 CTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTA 834 consensus_10516#3 CTGTTCAAAATACCTGAACAACGCACATATGAACCAAGTTCCATGGACTGGAAGAAGGTA 227 consensus_10516#0 GCGT----GGCTGCTGGACGCCTTCGGCACCG-CCACGATCGACCAGGTGGACTCCGCCT 499 consensus_10516#2 GCGT----GGCTGCTGGACGCCTTCGGCACCG-CCACGATCGACCAGGTGGACTCCGCCT 403 ** *** ** * * *** * ** * **** * consensus_10516#1 GTTAAGAGGCTG-CAGTCATTCAATTCTC----CCATCACATCGAACAATCAAGAAAAAC 889 consensus_10516#3 GTTAAGAGGCTG-CAGTCATTCAATTCTC----CCATCACATCGAACAATCAAGAAAAAC 282 consensus_10516#0 ACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAA 559 consensus_10516#2 ACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAA 463 ***** * * * * * * *** ** ** * ** consensus_10516#1 CAAAAAATGGGAATGGGTATCAAGAATT-----TCGTACTGTCGCTGG---AAGGCATTA 941 consensus_10516#3 CAAAAAATGGTATGTTGTTTTAGCCACTGTTATTTGTGTCGTTATTTG---TTAAGATCA 339 consensus_10516#0 CGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCA 619 consensus_10516#2 CGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGCGGGCCGGATCTGGTGGCA 523 * * * * * * consensus_10516#1 TGATACAATCGAAACATATTATCAGAAAGCTG-CCATGGCATATTCCAAAGGAGA----- 995 consensus_10516#3 TTAATTTCTTTTTGCATCACATTGAACTTTTTTCCTTTACTTCCTTTATTTCTGGCAATT 399 consensus_10516#0 GGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACG 679 consensus_10516#2 GGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACG 583 * * * * * consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 TTTTCTGTATC-CATCTTCTAAATCTGTAGCATGTTTTCACATTCTTATTCAATGGCTTC 458 consensus_10516#0 TGATCGGTAAGGCGTACACGCGACCTGCCACTT-CGCCCGTAAACAAAACGAACG-CGTG 737 consensus_10516#2 TGATCGGTAAGGCGTACACGCGACCTGCCACTT-CGCCCGTAAACAAAACGAACG-CGTG 641 consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 CAAATATCACTTTAGAATGAATTCTGGGAAGTGTAGCTGTTTGAGCTACCATATAATAAG 518 consensus_10516#0 GAAGGGCAACGCTTGGGAGGACGGAAGTGGTGGCGACCGCAAGTA-TAGTGTTGAAGAGG 796 consensus_10516#2 GAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTA-TAGTGTTGAAGAGG 700 consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ATCAATAATTG-TATGACCTTCATTTAAGACTAGTTTATTTATGGACTTGATA------- 570 consensus_10516#0 CCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCA 856 consensus_10516#2 CCGAGCAGTTCCTGTGCTCTATGCTGGGGGATAATTCGGAGCTTGGCATGGGTGTGGTCA 760 consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GAGACGTGCTCGGTAAGCTGCTTTTGCCTAACAAGCGTACCTGTAAAAAAATGCATTTTT 916 consensus_10516#2 GAGACGTGCTCGGTCAATATGGATGCGATGTTGAGAGG---------------------- 798 consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TTTACCGTTGTAAGAGCCCAGCAGAGTTATAATACATCAAAGAATGAAATAAAGATAGAA 976 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ACACTTACTACACACAACAGGAGAGCATCTACGATTCAAAAGATATATTTTTTCCCCCAA 1036 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GGAATGGTTGGTTCTTGTTTACAAAAAGAGAATCCAAATGCCATCCATAACATTGCACAG 1096 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TTCATAAGCCAATCTAGTGAAAGGAGCAAATATATTGTTTGATTGGACTAGAAAATATGA 1156 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TGATTAGTTTTTAGTTTTCTTATTCTGGGTGCGAATCTTGTGTTAACTTCCTGATCTGCT 1216 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 AATATTCTATATGAATTGTTATTATTACTCCCTCCAGTCAATAATATTTGACGTTAGTGC 1276 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TACTACTACTACTACTAATCTTAGCTATCCCAACACAAAATGTTATTGATTAGTTGGGGT 1336 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ATTATTATTATTTCAAAATGCTTGAAATGAAAGGGCAATAGGCTGTCTATCTCGTTCTCA 1396 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 AATCTGTGGCAATTAGGTTTGACTATGCCTCTTCCAGCACAGATGTGTCTGAGGCTGTGA 1456 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TGGTGGATTTGGGATGAAGTCCTATAGGAAGGTTATTCAGAGGATTGATTTTTTGTTTGA 1516 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 AACATTGTAGAAGCCCTGAATAAATAGAGCAAGATTCTTGTATGGTCAGTCACTTGGACT 1576 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TGTGTTATGCCAACATACATTGTGGTGCACCGTTGTTCTCTTAGGCCAAGCATTGGGATG 1636 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TGAAGGAGATTGTTGCCTACGGTGATTGTTTTATGCTAAGTTCTTGCATGAACTAAGAAT 1696 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GGAAGCATACTGATTTCCATCATAGATCAACGTTCTACCTTTCAATGTCATGGACATTGG 1756 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 CTGGTTTTCTTACATACATGGGTAGCGTTCTGCAGGTTAAAATCATCTATACATTTAGTT 1816 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GAATAGCTGCATGTTTGTAAATGTTATTTATATGCGGAACTGCTGCATAATTTACTCACA 1876 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 CAACTGCTGAAGTTATGTTTTCGTCATGAAACTAGTCATTGGATGAAATTTGGTGTTTGT 1936 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GTTTGTGTTGAAAGTTGATCCATTTTTATGGTTTCATTGAATGTAATACCAAATCTTTCA 1996 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 CTTTTATGCTTACTAAAACTAGTGGAGGGCAAAAGATTTCTTTTACCTTAGCATTTTATT 2056 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ATTTGTGATTGGCCAGTCAGTTGGAAGTGGAAATGAATCTTAGTGGAATGAGTTTCTGAT 2116 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GTTACTTCCCTCTATTGTTCAGGTCAATATGGATGCGATGTTGAGAAGGCTCTGGATGCA 2176 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TTACTTGATATCTCGGGTATGTCTTCCCTTCAAAACATGGAAAGGTGTTTCCCGAATGCT 2236 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 CAAATAAATGGCATGAGCTCTCCAAACATCTTCCTAGGAAATGGACGGTCTGAGGAAGTG 2296 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TCAACTGCAGGCATTGAAAAAAGTTCATACCAGTTTACAGATGAAATGCGAAACATGTCA 2356 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TATAATCGTTCCGATAATGAGCACGGATTCTTTTGGGGCGAGCTTCAGAGAAGCTACTTG 2416 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 AAGGTTGCATGTGAGGAGCCCCACTCAACAACATCATCTACAAGATCAACAAGCTCGATA 2476 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TCTAAGACACCACAACAAGTGCTCGATTCACTGTTCAAAATACCTGAACAACGCACATAT 2536 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GAACCAAGTTCCATGGACTGGAAGAAGGTAGTTAAGAGGCTGCAGTCATTCAATTCTCCC 2596 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ATCACATCGAACAATCAAGAAAAACCAAAAAATGGGAATGGGTATCAAGAATTTCGTACT 2656 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 GTCGCTGGAAGGCATTATGATACAATGAAAACATATTATCAGAAAGCTGCCATGGCATAT 2716 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TCCAAAGGAGAAAAATCTTATGCCTCCTATCTCGCAGAGGAGGGGAAGCATTACCGTGAA 2776 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 TTAGCTCGCATGGAAGATGAGAGAGCTAGCAGGGAAATATTTGAAGCCAGAAATAAGCAT 2836 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 ------------------------------------------------------------ consensus_10516#3 ------------------------------------------------------------ consensus_10516#0 ATAACGAATACAGTGACTATTGACCTGCATGGGCAACATGTTAAACAAGCCATGAGGCTT 2896 consensus_10516#2 ------------------------------------------------------------ consensus_10516#1 --------- consensus_10516#3 --------- consensus_10516#0 CTCAAGGTT 2905 consensus_10516#2 --------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||