These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10525#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2111 fasta sequence [AACCTCAAATCAAATCAAGAACAGCTCGTGCTTAGATCGCTCTCTCGCTTGCTGTTCTTCCAATCCACTCCTCTTGTTTGTGGCAAAGATCTGGGTTCTTTTTTTTTCTTTTTTTGCCGGGTTTTTTTGGAGAGGTTTTGTGAGCATGGAGGGTTTAAGGGGCGGCGGCCATGGCGAGGCGGCGGTGGACGGCGGCGACGAGAGGTGGGTGGAGGACTCGTCGGTGGATTACCAAGGGCGGCCTCCTCTCCGCGCCGCCACCGGATCATGGAAGGCCGCAATGTTCATCATCTTGATTGAGTTCAGCGAGAGGCTGAGCTACTTCGGGCTAGCGACGAGCTTGATGATCTACCTGACCAAGGTTCTCCAGGAGGAGATGAAGTTCGCCGCCAAGAATGTCAACTACTGGACCAGCGTCACCACCCTCATGCCCCTCGTCGGCGGCTTCCTCGCCGACGGCTACCTCGGCCGCTTCTCCACTGTCCTCTTCTCCACTCTCATCTACCTCTCGGGG-TTGATTCTGCTGGCGATATCGCAGCTGTCGCCGAGGCTGAAACCCGAGCGCAACCTGCACCTCCACGAGACGCTCTTCTTCGTGGCGATCTACCTGGTGTCGGTCGGCACCGGCGGGCACAAGCCGGCGCTGGAGAGCTTCGGCGCCGACCAGTTCGACGACGGCCACGCGGCGGAGCGGGTGCAGAAGATGTCCTACTTCAACTGGTGGAACTGCGCGCTCTGCGCCGGCGTCCTGCTCGGCGTCACCGTCATCGTCTACCTCCAGGAGAAGGTCGGCTGGGGCGCCGCCGCCGTCGTGCTCGCCGCCGTCATGGCCGCCTCCCTCGCCGTCTTCCTCGCCGGCTGGCGCCACTACCGGTACAGGGTCCCCGAGGGCAGCCCGCTCACGCCGCTCGTCCGCGTCCTCGTCGCCGCCGCGAGGAAGAGGCACCTCCACCTCCCCGCCGACGCCAACGAGCTCTACGAGGTGAAGCCGCAGAATATCAAGAGGCGGCTGCTCTGCCATACCGATCAACTTAGGTTTCTTGACAAGGCGGCCGTAGTGGAGCACGACGGCGGCGAGGAGCGGCGCGGGGCGTGGCGGTTGGCGACGGTGACGCAGGTGGAGGAGACGAAGCTGGTGCTGGCGATGGTGCCCATCTGGGTGGCGACGCTGCCGTTCGGCATCACGGCGGCGCAGGTGTCCACCTTCTTCATCAAGCAGGGCAGCGTGATGGACCGCCGCATGGGCCCGCACTTCACGCTGCCGCCGGCGTCCACCTTCGCCATGGCCGCCATCGGCATGATCGTCGCCGTGGCCGTGTACGACAAGGTCCTGGAGCCGTACCTGCGCCGCCTGACCGGCGGCGAGCGCGGGCTCAGCATCCTGAAGCGCATCGGCGTCGGCATCGCGTTCACCATCGTGGCCATGGCGGTGGCGGCGACAGTGGAGAGGCAGCGCCTCCGCAGCGCCTCGCCGGCGTCCATGTCGGTGTTCTGGCTGGTGCCGCAGTTCTTGCTGATGGGCATCGGCGACGGGTTCGCGCTGGTCGGTCTCCAAGAATACTTCTACGACCAGGTGCCGGACAGCATGCGCAGCCTCGGCATCGGCCTCTACCTCAGCGTCATCGGCGCCGGCAGCTTCCTGAGCAGCCAGCTGATCACGGCGGTGGACCGCGTCACCTCGCACGGCGGCGCCGCCGCCGGCTGGTTCGGCAAGGACCTGAACAGCAGCAGGCTGGACCTCTTCTACTGGCTTCTCGCCTGCATCGGCGTCGCCAACCTCGTCTTCTACGTGGTCATCGCCACCAGGTACTCGTACAAGACCGTCATGGCCGGCGGCAAGGTCGTCGACGACAAGGCCGGCGACATCGAGTGCGCCGCCGCCGCAGCTGCTGCTGCCTACTGATCAATATCAAGCAGTAGCTGATCGATTAGCTAGCTAGCTAGAAAATCATGGTAAGAAAGAAAATGGCATCATCATGTATTATGATCTGCTTTCGTGGTACGTGACAACAACAAAAAAATTGTAAGGATTATGTCGTTCGTCCATGTATATGCTTAATCTGCTTGTGATTGCCATCTGATCGTGTGATCTACTGCTACTGCTGATGTTG] [+] EMBL AK099193 [AACCTCAAATCAAATCAAGAACAGCTCGTGCTTAGATCGCTCTCTCGCTTGCTGTTCTTCCAATCCACTCCTCTTGTTTGTGGCAAAGATCTGGGTTCTTTTTTTTTCTTTTTTTGCCGGGTTTTTTTGGAGAGGTTTTGTGAGCATGGAGGGTTTAAGGGGCGGCGGCCATGGCGAGGCGGCGGTGGACGGCGGCGACGAGAGGTGGGTGGAGGACTCGTCGGTGGATTACCAAGGGCGGCCTCCTCTCCGCGCCGCCACCGGATCATGGAAGGCCGCAATGTTCATCATCTTGATTGAGTTCAGCGAGAGGCTGAGCTACTTCGGGCTAGCGACGAGCTTGATGATCTACCTGACCAAGGTTCTCCAGGAGGAGATGAAGTTCGCCGCCAAGAATGTCAACTACTGGACCAGCGTCACCACCCTCATGCCCCTCGTCGGCGGCTTCCTCGCCGACGGCTACCTCGGCCGCTTCTCCACTGTCCTCTTCTCCACTCTCATCTACCTCTCGGGG TTGATTCTGCTGGCGATATCGCAGCTGTCGCCGAGGCTGAAACCCGAGCGCAACCTGCACCTCCACGAGACGCTCTTCTTCGTGGCGATCTACCTGGTGTCGGTCGGCACCGGCGGGCACAAGCCGGCGCTGGAGAGCTTCGGCGCCGACCAGTTCGACGACGGCCACGCGGCGGAGCGGGTGCAGAAGATGTCCTACTTCAACTGGTGGAACTGCGCGCTCTGCGCCGGCGTCCTGCTCGGCGTCACCGTCATCGTCTACCTCCAGGAGAAGGTCGGCTGGGGCGCCGCCGCCGTCGTGCTCGCCGCCGTCATGGCCGCCTCCCTCGCCGTCTTCCTCGCCGGCTGGCGCCACTACCGGTACAGGGTCCCCGAGGGCAGCCCGCTCACGCCGCTCGTCCGCGTCCTCGTCGCCGCCGCGAGGAAGAGGCACCTCCACCTCCCCGCCGACGCCAACGAGCTCTACGAGGTGAAGCCGCAGAATATCAAGAGGCGGCTGCTCTGCCATACCGATCAACTTAGGTTTCTTGACAAGGCGGCCGTAGTGGAGCACGACGGCGGCGAGGAGCGGCGCGGGGCGTGGCGGTTGGCGACGGTGACGCAGGTGGAGGAGACGAAGCTGGTGCTGGCGATGGTGCCCATCTGGGTGGCGACGCTGCCGTTCGGCATCACGGCGGCGCAGGTGTCCACCTTCTTCATCAAGCAGGGCAGCGTGATGGACCGCCGCATGGGCCCGCACTTCACGCTGCCGCCGGCGTCCACCTTCGCCATGGCCGCCATCGGCATGATCGTCGCCGTGGCCGTGTACGACAAGGTCCTGGAGCCGTACCTGCGCCGCCTGACCGGCGGCGAGCGCGGGCTCAGCATCCTGAAGCGCATCGGCGTCGGCATCGCGTTCACCATCGTGGCCATGGCGGTGGCGGCGACAGTGGAGAGGCAGCGCCTCCGCAGCGCCTCGCCGGCGTCCATGTCGGTGTTCTGGCTGGTGCCGCAGTTCTTGCTGATGGGCATCGGCGACGGGTTCGCGCTGGTCGGTCTCCAAGAATACTTCTACGACCAGGTGCCGGACAGCATGCGCAGCCTCGGCATCGGCCTCTACCTCAGCGTCATCGGCGCCGGCAGCTTCCTGAGCAGCCAGCTGATCACGGCGGTGGACCGCGTCACCTCGCACGGCGGCGCCGCCGCCGGCTGGTTCGGCAAGGACCTGAACAGCAGCAGGCTGGACCTCTTCTACTGGCTTCTCGCCTGCATCGGCGTCGCCAACCTCGTCTTCTACGTGGTCATCGCCACCAGGTACTCGTACAAGACCGTCATGGCCGGCGGCAAGGTCGTCGACGACAAGGCCGGCGACATCGAGTGCGCCGCCGCCGCAGCTGCTGCTGCCTACTGATCAATATCAAGCAGTAGCTGATCGATTAGCTAGCTAGCTAGAAAATCATGGTAAGAAAGAAAATGGCATCATCATGTATTATGATCTGCTTTCGTGGTACGTGACAACAACAAAAAAATTGTAAGGATTATGTCGTTCGTCCATGTATATGCTTAATCTGCTTGTG ] [+] EMBL AK058972 [ ACCTCAAATCAAATCAAGAACAGCTCGTGCTTAGATCGCTCTCTCGCTTGCTGTTCTTCCAATCCACTCCTCTTGTTTGTGGCAAAGATCTGGGTTCTTTTTTTTTCTTTTTTTGCCGGGTTTTTTTGGAGAGGTTTTGTGAGCATGGAGGGTTTAAGGGGCGGCGGCCATGGCGAGGCGGCGGTGGACGGCGGCGACGAGAGGTGGGTGGAGGACTCGTCGGTGGATTACCAAGGGCGGCCTCCTCTCCGCGCCGCCACCGGATCATGGAAGGCCGCAATGTTCATCATCTTGATTGAGTTCAGCGAGAGGCTGAGCTACTTCGGGCTAGCGACGAGCTTGATGATCTACCTGACCAAGGTTCTCCAGGAGGAGATGAAGTTCGCCGCCAAGAATGTCAACTACTGGACCAGCGTCACCACCCTCATGCCCCTCGTCGGCGGCTTCCTCGCCGACGGCTACCTCGGCCGCTTCTCCACTGTCCTCTTCTCCACTCTCATCTACCTCTCGGGG TTGATTCTGCTGGCGATATCGCAGCTGTCGCCGAGGCTGAAACCCGAGCGCAACCTGCACCTCCACGAGACGCTCTTCTTCGTGGCGATCTACCTGGTGTCGGTCGGCACCGGCGGGCACAAGCCGGCGCTGGAGAGCTTCGGCGCCGACCAGTTCGACGACGGCCACGCGGCGGAGCGGGTGCAGAAGATGTCCTACTTCAACTGGTGGAACTGCGCGCTCTGCGCCGGCGTCCTGCTCGGCGTCACCGTCATCGTCTACCTCCAGGAGAAGGTCGGCTGGGGCGCCGCCGCCGTCGTGCTCGCCGCCGTCATGGCCGCCTCCCTCGCCGTCTTCCTCGCCGGCTGGCGCCACTACCGGTACAGGGTCCCCGAGGGCAGCCCGCTCACGCCGCTCGTCCGCGTCCTCGTCGCCGCCGCGAGGAAGAGGCACCTCCACCTCCCCGCCGACGCCAACGAGCTCTACGAGGTGAAGCCGCAGAATATCAAGAGGCGGCTGCTCTGCCATACCGATCAACTTAGGTTTCTTGACAAGGCGGCCGTAGTGGAGCACGACGGCGGCGAGGAGCGGCGCGGGGCGTGGCGGTTGGCGACGGTGACGCAGGTGGAGGAGACGAAGCTGGTGCTGGCGATGGTGCCCATCTGGGTGGCGACGCTGCCGTTCGGCATCACGGCGGCGCAGGTGTCCACCTTCTTCATCAAGCAGGGCAGCGTGATGGACCGCCGCATGGGCCCGCACTTCACGCTGCCGCCGGCGTCCACCTTCGCCATGGCCGCCATCGGCATGATCGTCGCCGTGGCCGTGTACGACAAGGTCCTGGAGCCGTACCTGCGCCGCCTGACCGGCGGCGAGCGCGGGCTCAGCATCCTGAAGCGCATCGGCGTCGGCATCGCGTTCACCATCGTGGCCATGGCGGTGGCGGCGACAGTGGAGAGGCAGCGCCTCCGCAGCGCCTCGCCGGCGTCCATGTCGGTGTTCTGGCTGGTGCCGCAGTTCTTGCTGATGGGCATCGGCGACGGGTTCGCGCTGGTCGGTCTCCAAGAATACTTCTACGACCAGGTGCCGGACAGCATGCGCAGCCTCGGCATCGGCCTCTACCTCAGCGTCATCGGCGCCGGCAGCTTCCTGAGCAGCCAGCTGATCACGGCGGTGGACCGCGTCACCTCGCACGGCGGCGCCGCCGCCGGCTGGTTCGGCAAGGACCTGAACAGCAGCAGGCTGGACCTCTTCTACTGGCTTCTCGCCTGCATCGGCGTCGCCAACCTCGTCTTCTACGTGGTCATCGCCACCAGGTACTCGTACAAGACCGTCATGGCCGGCGGCAAGGTCGTCGACGACAAGGCCGGCGACATCGAGTGCGCCGCCGCCGCAGCTGCTGCTGCCTACTGATCAATATCAAGCAGTAGCTGATCGATTAGCTAGCTAGCTAGAAAATCATGGTAAGAAAGAAAATGGCATCATCATGTATTATGATCTGCTTTCGTGGTACGTGACAACAACAAAAAAATTGTAAGGATTATGTCGTTCGTCCATGTATATGCTTAATCTGCTTGTGATTGCCATCTGATCGTGTGATCTACTGCTACTGCTGATGTTG] [+] EMBL CB636207 [ CTCGTGCTTAGATCGCTCTCTCGCTTGCTGTTCTTCCAATCCACTCCTCTTGTTTGTGGCAAAGATCTGGGTTCTTTTTTTTTCTTTTTTTGCCGGGTTTTTTTGGAGAGGTTTTGTGAGCATGGAGGGTTTAAGGGGCGGCGGCCATGGCGAGGCGGCGGTGGACGGCGGCGACGAGAGGTGGGTGGAGGACTCGTCGGTGGATTACCAAGGGCGGCCTCCTCTCCGCGCCGCCACCGGATCATGGAAGGCCGCAATGTTCATCATCTTGATTGAGTTCAACGAGAGGCTGAGCTACTTCGGGCTACCGACGAGCTTGATGATCTACCTGACCAAGGTTCTCCAGGAGGAGATGAAGTTCGCCGCCCAGAATGTCAACTACTGGACCAACGTCACCACCCTCATGC ] [+] EMBL CB636278 [ TCGTGCTTAGATCGCTCTCTCGCTTGCTGTTCTTCCAATCCACTCCTCTTGTTTGTGGCAAAGATCTGGGTTCTTTTTTTTTCTTTTTTTGCCGGGTTTTTTTGGAGAGGTTTTGTGAGCATGGAGGGTTTAAGGGGCGGCGGCCATGGCGAGGCGGCGGTGGACGGCGGCGACAAGAGGTGGGTGGAGGACTCGTCGGTGGATTACCAAGGGCGGCCTCCTCTCCGCGCCGCCACCGGATCATGGAAGGCCGCAATGTTCATCATCTTGATTGAGTTCAGCGAGAGGCTGAGCTACTTCGGGCTAGCGACGAGCTTGATGATCTACCTGACCAAGGTTCTCCAGGAGGAGATGAAGTTCGCCGCCAAGAATGTCAACTACTGGACCAGCGTCACCACCCTCATGCCCCTCGTCGGCGGCTTCCTCGCCGACGGCTACCTCGGCCGCTTCTCCACTGTCCTCTTCTCCACTCTCATCTACCTCTCGGGGTTTGATTCTG ] [+] EMBL C72013 [ GCCGTCGTGCTCGCCGCCGTCATGGCCGNCTCCNTCGCCGTCTTCCTCGCCGGCTGGCGCCACTACCGGTACAGGGTCCCCNAGGGCAGCCCGCTCACGNCGCTCGTCCGCTTCCTCNTCGCCGCCGCNAGGAAGAGGCACCTCCACCTCCCCGCCGACGCCAACNAGCTCTACGAGGTGAAGCCGCAGAATATCAAGAGGCGGCTGCTCTGCCATACCGATCAANTTAGGTTTNTTGACAAGGCGGCCGTAGTGGAGCACGAC ] [-] EMBL CB663455 [ GACAGTGGAGAGGCAGCGCCTCCGCAGCGCCTCGCCGGCGTCCATGTCGGTGTTCTGGCTGGTGCCGCAGTTCTTGCTGATGGGCATCGGCGACGGGTTCGCGCTGGTCGGTCTCCAAGAATACTTCTACGACCAGGTGCCGGACAGCATGCGCAGCCTCGGCATCGGCCTCTACCTCAGCGTCATCGGCGCCGGCAGCTTCCTGAGCAGCCAGCTGATCACGGCGGTGGACCGCGTCACCTCGCACGGCGGCGCCGCCGCCGGCTGGTTCGGCAAGGACCTGAACAGCAGCAGGCTGGACCTCTTTTACTGGCTTCTCGCCTGCATCGGCGTCGCCAACCTCGTCTTCTACGTGGTCATCGCCACCAGGTACTCGTACAAGACCGTCATGGCCGGCGGCAAGGTCGTCGACGACAAGGCCGGCGACATCGAGTGCGCCGCCGCCGCAGCTGCTGCTGCCTACTGATCAATATCAAGCAGTAGCTGATCGATTAGCTAGCTAGCTAGAAAATCATGGTAAGAAAGAAAATGGCATCATCATGTATTATGATCTGCTTTCGTGGTACGTGACAACAACAAAAAAATTGTAAGGATTATGTCGTTCGTCCATGTATATGCTTAATCTGCTT ] [-] EMBL CB636208 [ CCGGACAGCATGCGCAGCTTCGGCATCGGCCTCTACCTCAGCGTCATCGGCGCCGGCAGCTTCCTGAGCAGCCAGCTGATCACGGCGGTGGACCGCGTCACCTCGCACGGCGGCGCCGCCGCCGGCTGGTTCGGCAAGGACTTGAACAGCAGCAGGCTGGACCTCTTCTACTGGCTTCTCGCCTGCATCGGCGTCGCCAACCTCGTCTTCTACGTGGTCATCGCCACCAGGTACTCGTACAAGACCGTCATGGCCGGCGGCAAGGTCGTCGACGACAAGGCCGGCGACATCGAGTGCGCCGCCGCCGCAGCTGCTGCTGCCTACTGATCAATATCAAGCAGTAGCTGATCGATTAGCTAGCTAGCTAGAAAATCATGGTAAGAAAGAAAATGGCATCATCATGTATTATGATCTGCTTTCGTGGTACGTGACAACAACAAAAAAATTGTAAGGATTATGTCGTTCGTCCATGTATATGCTTAATCTGCTTGTGATTGCCATCTGATAGTGTGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||