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Oryza sativa
cluster # 10528 cluster # 10528       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10528#0 length = 2283 sequences # 4  
consensus_10528#1 length = 577 sequences # 1  
consensus_10528#2 length = 383 sequences # 2  

consensusID : consensus_10528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2283
fasta sequence
                              [GCCAGAGGCACCTAATTTTGGCACTGGTCGTCCCCAGCAGAGCAGATGAACAAGAGAGGTGCCTCGCAATTCCCAAACGAAACGAAACGAAAGGAAACAAAGNGATCCTTCTTGCGCTCCGGCGCCGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGGAGGCCAGGCCCCATGCATGCATGTNAATTAGTCTGTNACTGATCACTTCATCCCATTAGCCATTAGCTGTTTCTNATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCCGGCCATGACGACGACGGCCGCCGGCGGAG-CACCCTGTGCGCGGCGAGGGAGGAGCAGGAGCTCCTGGCCACCCGCCTGAATGTGAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCTATCCTCATCTACCTTACCGGGCCGGGGCTCTCCATGATGCCCATGCGGGTNATGGCCTCCGAC-TCCATCGCCTCCGTCAAGCTCCGCGTCCAGACCTCCAAGGGCTTCGTCGTCCGCAAGCAGAAGCTCGTCTTCGATGGCCGGGAGCTCGCCCGGAACGACAGCCGCATCATGGACTACGGCGTCTCCCACGGCAACGTCCTCCACCTCGTCATCCGCATCTCCGACCTCCGCCTCATCACCGTCCAGACCGTCCACGGCAACAAGTTCAGGTTCCGCGTCGAGCCCGGCCGCACCGTCGGCTACGTCAAGCAGCAGATCGCCAAGAACTCCACCCACGACGACGACCACCACAGCCTCGTCCTCCAGGGCGAGGTGCTCGACGACGCCCACCTCATCCACGACGTCTGCAGGACCGACGGCGCCGTCATCCACCTGCTCGTCCACCGCTCCGCCAAGCTCGCCGCCAGGCCCGTCGACCGGGACTTCGAGGTCTCCATCGTCGCGCGCAACCGCAACGCCGCCGCCGACGCTGCTCAACCGACGTTGCACCTGCAGAGGGACTTCGCCATCGAGCCGGTCATCGTCAACCCCAAGGCCGCGCTTCCGCCAGTGATCGAGAACCTGGTGGGCGCCGTGCTGGCCGGGATGGAGAAGGGGAACGCCCCGATCATGTCGTCGGAGGGCACCGGGGGGGCGTATTTCATGCAGGACGCGTCGGGGCAGGAGCACGTCGCCGTGTTCAAGCCGGTGGACGAGGAGCCCATGGCGGCCAACAACCCACGCGGCCTCCCACCCTCGCCCACCGGCGAGGGGCTCAAGAAGGGGACACGCGTCGGCGAGGGCGCCATCAGAGAGGTCGCCGCCTACATCCTCGACCACCCTCCCGGTGGCCGCCGTTCGTTCGCAGGACATCATGGCTCCGCCACCGTGGGCTTCGCCGGTGTCGCGCCAACCGCGCTGGTCCGTTGCATGCACAGGAGCTTCAAGCAACCTGCAGCTTCCGAACAAGGTCCTCCATTGTTCAAGGTGGGGTCATTGCAAGCGTTCGTGAAGAACAGCGGCAGCTGCGAGGACATGGGACCTCGTGCGTTCCCGGTGCACGAAGTTCACAAGATCTGCGTGCTGGACATCAGGCTGGCCAACGCCGACAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCACCCTGGTTCCGATCGACCATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACATTCGAGTGGCTCTACTGGCCGCAGTGTCGGGAGCCATTCAGCGAGGAGACGGTGGAGTACATAAGGTCACTGGACGCGGAGGAGGACATCGCCATTCTGAGGTTCCATGGGTGGGAGATGCCAGCCAAGTGCGAGCGCGTCCTGCGCGTCACCACCATGCTGCTCAAGAAGGGCGTCGACTCGGGCCTCGCCGCGTTCGACATGGGGAGCATCTTGTGCAGGGAGACGCTCACCAAGGAGTCTGTCATCGAGGAGATCATCCGTGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTCCTGCAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAAGAAAAAAAAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAAATAACGTCAATAAAAAGGGCCAAGCTAAACTAATTAAAAGGGACAGAGGAAAAGGTTGTACTAGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATCAGCAGTGGATTTAAAGGCCTTGAGGGCGTGTACCCTTTTTTTTCTTTCATGTGGTTTAATTATGTGGA]

[+] EMBL AK072823             [GCCAGAGGCACCTAATTTTGGCACTGGTCGTCCCCAGCAGAGCAGATGAACAAGAGAGGTGCCTCGCAATTCCCAAACGAAACGAAACGAAAGGAAACAAAGCGATCCTTCTTGCGCTCCGGCGCCGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGGAGGCCAGGCCCCATGCATGCATGTTAATTAGTCTGTCACTGATCACTTCATCCCATTAGCCATTAGCTGTTTCTCATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCCGGCCATGACGACGACAGCCGCCGGCGGAGCCACCCTGTGCGCGGCGAGGGAGGAGCAGGAGCTCCTGGCCACCCGCCTGAATGTGATCGGCATCCGGCCGCCGCATTGCGCCGCGGAATCTATCCTCATCTACCTCACCGCGCCGGGGCTCTCCATGATGCCCATGCGGGTGATGGCCTCCGAC TCCATCGCCTCCGTCAAGCTCCGCGTCCAGACCTCCAAGGGCTTCGTCGTCCGCAAGCAGAAGCTCGTCTTCGATGGCCGGGAGCTCGCCCGGAACGACAGCCGCATCATGGACTACGGCGTCTCCCACGGCAACGTCCTCCACCTCGTCATCCGCATCTCCGACCTCCGCCTCATCACCGTCCAGACCGTCCACGGCAACAAGTTCAGGTTCCGCGTCGAGCCCGGCCGCACCGTCGGCTACGTCAAGCAGCAGATCGCCAAGAACTCCACCCACGACGACGACCACCACAGCCTCGTCCTCCAGGGCGAGGTGCTCGACGACGCCCACCTCATCCACGACGTCTGCAGGACCGACGGCGCCGTCATCCACCTGCTCGTCCACCGCTCCGCCAAGCTCGCCGCCAGGCCCGTCGACCGGGACTTCGAGGTCTCCATCGTCGCGCGCAACCGCAACGCCGCCGCCGACGCTGCTCAACCGACGTTGCACCTGCAGAGGGACTTCGCCATCGAGCCGGTCATCGTCAACCCCAAGGCCGCGCTTCCGCCAGTGATCGAGAACCTGGTGGGCGCCGTGCTGGCCGGGATGGAGAAGGGGAACGCCCCGATCATGTCGTCGGAGGGCACCGGGGGGGCGTATTTCATGCAGGACGCGTCGGGGCAGGAGCACGTCGCCGTGTTCAAGCCGGTGGACGAGGAGCCCATGGCGGCCAACAACCCACGCGGCCTCCCACCCTCGCCCACCGGCGAGGGGCTCAAGAAGGGGACACGCGTCGGCGAGGGCGCCATCAGAGAGGTCGCCGCCTACATCCTCGACCACCCTCCCGGTGGCCGCCGTTCGTTCGCAGGACATCATGGCTCCGCCACCGTGGGCTTCGCCGGTGTCGCGCCAACCGCGCTGGTCCGTTGCATGCACAGGAGCTTCAAGCAACCTGCAGCTTCCGAACAAGGTCCTCCATTGTTCAAGGTGGGGTCATTGCAAGCGTTCGTGAAGAACAGCGGCAGCTGCGAGGACATGGGACCTCGTGCGTTCCCGGTGCACGAAGTTCACAAGATCTGCGTGCTGGACATCAGGCTGGCCAACGCCGACAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCACCCTGGTTCCGATCGACCATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACATTCGAGTGGCTCTACTGGCCGCAGTGTCGGGAGCCATTCAGCGAGGAGACGGTGGAGTACATAAGGTCACTGGACGCGGAGGAGGACATCGCCATTCTGAGGTTCCATGGGTGGGAGATGCCAGCCAAGTGCGAGCGCGTCCTGCGCGTCACCACCATGCTGCTCAAGAAGGGCGTCGACTCGGGCCTCGCCGCGTTCGACATGGGGAGCATCTTGTGCAGGGAGACGCTCACCAAGGAGTCTGTCATCGAGGAGATCATCCGTGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTCCTGCAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAAGAAAAAAAAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAAATAACGTCAATAAAAAGGGCCAAGCTAAACTAATTAAAAGGGACAGAGGAAAAGGTTGTACTAGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATCAGCAGTGGATTTAAAGGCCTTGAGGGCGTGTACCCTTTTTTTTCTTTCATGTGGTTTAATTATGTGGA]
[+] EMBL AU063809             [                                                                                                    AGNGATCCTTCTTGCGCTCCGGCGTCGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGGAGGCCAGGCCCCATGCATGCATGTNAATTAGTCTGTNACTGATCACTTCATCCCATTAGCCATTAGCTGTTTCTNATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCCGGCCATGACGACGACGGCCGCCGGCGGAG CACCCTGTGCGCGGCGAGGGAGGAGCAGGAGCTCCTGGCCACCCGCCTGAATGTNAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCTATCCTCATCTACCTTACCGGGCCGGGGNTTTCCATGATGCCCATGCGGGTNATGGCCTCCGACTTCAATNG CTCCGTAAAAGTTCG GTCCAGACCTCAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU063808             [                                                                                                    AGNGATCCTTCTTGCGCTCCGGCG CGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGGAGGCCAGGCCCCATGCATGCATGTNAATTAGTCTGTNACTGATCACTTCATCCCATTAGCCATTAGCTGTTTCTNATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCCGGCCATGACGACGACGGCCGCCGGCGGAG CACCCTGTGCGCGGCGAGGGAGGAGCAGGAGCTCCTGGCCACCCGCCTGAATGTNAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCTATCCTCATCTACCTTACCGNGCCGGGGCTNTTCATGATGCCCATGCGGGTNATGGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU063807             [                                                                                                    AGNGATCCTTCTTGCGCTCCGGCGCCGCCGTCTCCCCCTCGNGCGGTTGCCTGAGCCAAGAACAGGNTCGGAGGCCAGGCCCCATGCATGCATGTNAATTAGTCTGTNACTGATCACTTCATCCCATTAGCCATTAGCTGTTTCTNATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCCGGCCATGACGACGACGGCCGCCGGCGGAG CACCCTGTGCGCGGCGAGGGAGGAGCAGGAGCTCCTGGCCACCCGCCTGANTGTGAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCTATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_10528#0 GCCAGAGGCACCTAATTTTGGCACTGGTCGTCCCCAGCAGAGCAGATGAACAAGAGAGGT GCCTCGCAATTCCCAAACGAAACGAAACGAAAGGAAACAAAGNGATCCTTCTTGCGCTCC GGCGCCGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGGAGGCCAGGC CCCATGCATGCATGTNAATTAGTCTGTNACTGATCACTTCATCCCATTAGCCATTAGCTG TTTCTNATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCC GGCCATGACGACGACGGCCGCCGGCGGAGCACCCTGTGCGCGGCGAGGGAGGAGCAGGAG CTCCTGGCCACCCGCCTGAATGTGAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCT ATCCTCATCTACCTTACCGGGCCGGGGCTCTCCATGATGCCCATGCGGGTNATGGCCTCC GACTCCATCGCCTCCGTCAAGCTCCGCGTCCAGACCTCCAAGGGCTTCGTCGTCCGCAAG CAGAAGCTCGTCTTCGATGGCCGGGAGCTCGCCCGGAACGACAGCCGCATCATGGACTAC GGCGTCTCCCACGGCAACGTCCTCCACCTCGTCATCCGCATCTCCGACCTCCGCCTCATC ACCGTCCAGACCGTCCACGGCAACAAGTTCAGGTTCCGCGTCGAGCCCGGCCGCACCGTC GGCTACGTCAAGCAGCAGATCGCCAAGAACTCCACCCACGACGACGACCACCACAGCCTC GTCCTCCAGGGCGAGGTGCTCGACGACGCCCACCTCATCCACGACGTCTGCAGGACCGAC GGCGCCGTCATCCACCTGCTCGTCCACCGCTCCGCCAAGCTCGCCGCCAGGCCCGTCGAC CGGGACTTCGAGGTCTCCATCGTCGCGCGCAACCGCAACGCCGCCGCCGACGCTGCTCAA CCGACGTTGCACCTGCAGAGGGACTTCGCCATCGAGCCGGTCATCGTCAACCCCAAGGCC GCGCTTCCGCCAGTGATCGAGAACCTGGTGGGCGCCGTGCTGGCCGGGATGGAGAAGGGG AACGCCCCGATCATGTCGTCGGAGGGCACCGGGGGGGCGTATTTCATGCAGGACGCGTCG GGGCAGGAGCACGTCGCCGTGTTCAAGCCGGTGGACGAGGAGCCCATGGCGGCCAACAAC CCACGCGGCCTCCCACCCTCGCCCACCGGCGAGGGGCTCAAGAAGGGGACACGCGTCGGC GAGGGCGCCATCAGAGAGGTCGCCGCCTACATCCTCGACCACCCTCCCGGTGGCCGCCGT TCGTTCGCAGGACATCATGGCTCCGCCACCGTGGGCTTCGCCGGTGTCGCGCCAACCGCG CTGGTCCGTTGCATGCACAGGAGCTTCAAGCAACCTGCAGCTTCCGAACAAGGTCCTCCA TTGTTCAAGGTGGGGTCATTGCAAGCGTTCGTGAAGAACAGCGGCAGCTGCGAGGACATG GGACCTCGTGCGTTCCCGGTGCACGAAGTTCACAAGATCTGCGTGCTGGACATCAGGCTG GCCAACGCCGACAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGC CTCACCCTGGTTCCGATCGACCATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACA TTCGAGTGGCTCTACTGGCCGCAGTGTCGGGAGCCATTCAGCGAGGAGACGGTGGAGTAC ATAAGGTCACTGGACGCGGAGGAGGACATCGCCATTCTGAGGTTCCATGGGTGGGAGATG CCAGCCAAGTGCGAGCGCGTCCTGCGCGTCACCACCATGCTGCTCAAGAAGGGCGTCGAC TCGGGCCTCGCCGCGTTCGACATGGGGAGCATCTTGTGCAGGGAGACGCTCACCAAGGAG TCTGTCATCGAGGAGATCATCCGTGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTC CTGCAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAAGAAAAAAAAA AGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAAATA ACGTCAATAAAAAGGGCCAAGCTAAACTAATTAAAAGGGACAGAGGAAAAGGTTGTACTA GTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATCAGCAG TGGATTTAAAGGCCTTGAGGGCGTGTACCCTTTTTTTTCTTTCATGTGGTTTAATTATGT GGA



consensusID : consensus_10528#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 577
fasta sequence
                              [AGCGAGACAAGGGAGCAGATGAGGCTGGGTAGTCGGTGCCCCGATGGGGCTGAGGCTGAGGTTGCGGGGGGAGCTCGTCCGGCGGGTCTATGGCCGTGGATCTCGGCTCGACGAAGAGGCGGTCGCCACCCCCCACCGGCAGTGGTGGCGGTCCCCGGAGTGGAGTCGACGATGCTGAGGCCAGCGCTCGGCGAGATGGGATTTGCGTGTTGGACATCAGGCTGGCCAACGCCGGCAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCTCCCTGGTTCCAATCGACCATGGATACTGTCTTCCTGAGAGTGTAAGCACTGACGCTGACAGATTTTTTTCTTGCTAATTGACTTCCATTTTGTTCGTTGGTGATCATGCATCGATCACGCATGTGGAGTTTGAGGATTGCCCAATAATTTCAGGGGCGGGCCCAATTCAATTAATAGGTATTCAAATGAATTCCCAAGATTTTTGAAAAAAATACATATCTTTTTGAAAAAAATACATATATGAAGTATATATTCCCATATGTATATATAGGAAAAAAAAAAAAAAAAA]

[-] EMBL CA760108             [AGCGAGACAAGGGAGCAGATGAGGCTGGGTAGTCGGTGCCCCGATGGGGCTGAGGCTGAGGTTGCGGGGGGAGCTCGTCCGGCGGGTCTATGGCCGTGGATCTCGGCTCGACGAAGAGGCGGTCGCCACCCCCCACCGGCAGTGGTGGCGGTCCCCGGAGTGGAGTCGACGATGCTGAGGCCAGCGCTCGGCGAGATGGGATTTGCGTGTTGGACATCAGGCTGGCCAACGCCGGCAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCTCCCTGGTTCCAATCGACCATGGATACTGTCTTCCTGAGAGTGTAAGCACTGACGCTGACAGATTTTTTTCTTGCTAATTGACTTCCATTTTGTTCGTTGGTGATCATGCATCGATCACGCATGTGGAGTTTGAGGATTGCCCAATAATTTCAGGGGCGGGCCCAATTCAATTAATAGGTATTCAAATGAATTCCCAAGATTTTTGAAAAAAATACATATCTTTTTGAAAAAAATACATATATGAAGTATATATTCCCATATGTATATATAGGAAAAAAAAAAAAAAAAA]


>consensus_10528#1 AGCGAGACAAGGGAGCAGATGAGGCTGGGTAGTCGGTGCCCCGATGGGGCTGAGGCTGAG GTTGCGGGGGGAGCTCGTCCGGCGGGTCTATGGCCGTGGATCTCGGCTCGACGAAGAGGC GGTCGCCACCCCCCACCGGCAGTGGTGGCGGTCCCCGGAGTGGAGTCGACGATGCTGAGG CCAGCGCTCGGCGAGATGGGATTTGCGTGTTGGACATCAGGCTGGCCAACGCCGGCAGGC ACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCTCCCTGGTTCCAA TCGACCATGGATACTGTCTTCCTGAGAGTGTAAGCACTGACGCTGACAGATTTTTTTCTT GCTAATTGACTTCCATTTTGTTCGTTGGTGATCATGCATCGATCACGCATGTGGAGTTTG AGGATTGCCCAATAATTTCAGGGGCGGGCCCAATTCAATTAATAGGTATTCAAATGAATT CCCAAGATTTTTGAAAAAAATACATATCTTTTTGAAAAAAATACATATATGAAGTATATA TTCCCATATGTATATATAGGAAAAAAAAAAAAAAAAA



consensusID : consensus_10528#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 383
fasta sequence
                              [TGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTCCTGCAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAAGAANANAAAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAAATAACGTCAATAAAAAGGGCCAAGCTAAACTAATTAAAAGGGACAGNGGAAAAGGTTGTACTNGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATCAGCAGTGGATTTAAAGGCCTTGAGGGNGTGTANCCTTTTTTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU101069             [TGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTCCTGCAGTCTGTCTCTCAATCCATGGATCGCCGTCTGGGTGAATTATCCAAGAANANAAAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAAATAACGTCAATAAAAAGGGCCAAGCTAAACTAATTAAAAGGGACAGNGGAAAAGGTTGTACTNGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATCAGCAGTGGATTTAAAGGCCTTGAGGGNGTGTANCCTTTTTTTTCTTTAAAAAAAAAAAAAAAAAAAAAA                                          ]
[+] EMBL AU093827             [                                                                                                                                                                                                                  TGTACTNGTGTACTTGAGTTATAAACTTTTTNTGCNGCTGACAATTGNGTGTACATGTAATCAGCAGTGGATTTAAAGGCCTTGAGGGNGTGT NCCCTTTTTT  TTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10528#2 TGAGGTTGAAGACGATGTTGGTGATGAAGCTGCCTTCCTGCAGTCTGTCTCTCAATCCAT GGATCGCCGTCTGGGTGAATTATCCAAGAANANAAAAAGTAATGTAAGTATACAAGATTA ACTGGTTGCCTCCCTCTACTCATATCATAGATAAATAACGTCAATAAAAAGGGCCAAGCT AAACTAATTAAAAGGGACAGNGGAAAAGGTTGTACTNGTGTACTTGAGTTATAAACTTTT TGTGCAGCTGACAATTGAGTGTACATGTAATCAGCAGTGGATTTAAAGGCCTTGAGGGNG TGTANCCTTTTTTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10528#0      GCCAGAGGCACCTAATTTTGGCACTGGTCGTCCCCAGCAGAGCAGATGAACAAGAGAGGT 60
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GCCTCGCAATTCCCAAACGAAACGAAACGAAAGGAAACAAAGNGATCCTTCTTGCGCTCC 120
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGCGCCGCCGTCTCCCCCTCGCGCGGTTGCCTGAGCCAAGAACAGGATCGGAGGCCAGGC 180
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CCCATGCATGCATGTNAATTAGTCTGTNACTGATCACTTCATCCCATTAGCCATTAGCTG 240
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      TTTCTNATCCAGACGGACGCGCCATCCAACACACATCGATCGATCGGAGGTTGATTGGCC 300
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGCCATGACGACGACGGCCGCCGGCGGAGCACCCTGTGCGCGGCGAGGGAGGAGCAGGAG 360
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CTCCTGGCCACCCGCCTGAATGTGAACGGCATCCGGCCGCCGCATTGCGCCGCGGAATCT 420
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      ATCCTCATCTACCTTACCGGGCCGGGGCTCTCCATGATGCCCATGCGGGTNATGGCCTCC 480
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GACTCCATCGCCTCCGTCAAGCTCCGCGTCCAGACCTCCAAGGGCTTCGTCGTCCGCAAG 540
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CAGAAGCTCGTCTTCGATGGCCGGGAGCTCGCCCGGAACGACAGCCGCATCATGGACTAC 600
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGCGTCTCCCACGGCAACGTCCTCCACCTCGTCATCCGCATCTCCGACCTCCGCCTCATC 660
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      ACCGTCCAGACCGTCCACGGCAACAAGTTCAGGTTCCGCGTCGAGCCCGGCCGCACCGTC 720
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGCTACGTCAAGCAGCAGATCGCCAAGAACTCCACCCACGACGACGACCACCACAGCCTC 780
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GTCCTCCAGGGCGAGGTGCTCGACGACGCCCACCTCATCCACGACGTCTGCAGGACCGAC 840
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGCGCCGTCATCCACCTGCTCGTCCACCGCTCCGCCAAGCTCGCCGCCAGGCCCGTCGAC 900
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CGGGACTTCGAGGTCTCCATCGTCGCGCGCAACCGCAACGCCGCCGCCGACGCTGCTCAA 960
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CCGACGTTGCACCTGCAGAGGGACTTCGCCATCGAGCCGGTCATCGTCAACCCCAAGGCC 1020
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GCGCTTCCGCCAGTGATCGAGAACCTGGTGGGCGCCGTGCTGGCCGGGATGGAGAAGGGG 1080
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      AACGCCCCGATCATGTCGTCGGAGGGCACCGGGGGGGCGTATTTCATGCAGGACGCGTCG 1140
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGGCAGGAGCACGTCGCCGTGTTCAAGCCGGTGGACGAGGAGCCCATGGCGGCCAACAAC 1200
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CCACGCGGCCTCCCACCCTCGCCCACCGGCGAGGGGCTCAAGAAGGGGACACGCGTCGGC 1260
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GAGGGCGCCATCAGAGAGGTCGCCGCCTACATCCTCGACCACCCTCCCGGTGGCCGCCGT 1320
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      TCGTTCGCAGGACATCATGGCTCCGCCACCGTGGGCTTCGCCGGTGTCGCGCCAACCGCG 1380
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CTGGTCCGTTGCATGCACAGGAGCTTCAAGCAACCTGCAGCTTCCGAACAAGGTCCTCCA 1440
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      TTGTTCAAGGTGGGGTCATTGCAAGCGTTCGTGAAGAACAGCGGCAGCTGCGAGGACATG 1500
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GGACCTCGTGCGTTCCCGGTGCACGAAGTTCACAAGATCTGCGTGCTGGACATCAGGCTG 1560
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      GCCAACGCCGACAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGC 1620
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      CTCACCCTGGTTCCGATCGACCATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACA 1680
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ------------------------------------------------------------
                                                                                   

consensus_10528#0      TTCGAGTGGCTCTACTGGCCGCAGTGTCGGGAGCCATTCAGCGAGGAGACGGTGGAGTAC 1740
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      -----------------AGCGAGACAAGGGAGCAGATGAGGCTGGGTAGTCGGTGCCCCG 43
                                                                                   

consensus_10528#0      ATAAGGTCACTGGACGCGGAGGAGGACATCGCCATTCTGAGGTTCCATGGGTGGGAGATG 1800
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      ATGGGGCTGAGGCTGAGGTTGCGGGGGGAGCTCGTCCGGCGGGTCTATGGCCGTG-GATC 102
                                                                                   

consensus_10528#0      CCAGCCAAGTGCGAGCGCGTCCTGCGCGTCACCACCATGCTGCTCAAGAAGGGCGTCGAC 1860
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      TCGGCTCGACGAAGAGGCGGTCGCCACCCCCCACCGGCAGTGGT-------GGCGGTCCC 155
                                                                                   

consensus_10528#0      TCGGGCCTCGCCGCGTTCGACATGGGGAGCATCTTGTGCAGGGAGACGCTCACCAAGGAG 1920
consensus_10528#2      ------------------------------------------------------------
consensus_10528#1      CGGAGTGGAGTCGACGATGCTGAGGCCAGCGCTCGGCGAGATGGGATTTGCGTGTTGGAC 215
                                                                                   

consensus_10528#0      TCTGTCATCGAGGAGATCATCCGTGAGGTTGAAGACGATGTTGGTGATGAAGCTG--CCT 1978
consensus_10528#2      -----------------------TGAGGTTGAAGACGATGTTGGTGATGAAGCTG--CCT 35
consensus_10528#1      ATCAGGCTGGCCAACGCCGGCAGGCACGCCGGCAACATCCTCACCTGCAGAGACGAACAA 275
                                                * *  *   **    *         **  *  *  

consensus_10528#0      TCCTGCAGTCTGTCTCTCAATCCATGGATCG-CCGTCTGGGTGAATTATCCAAGAAAAAA 2037
consensus_10528#2      TCCTGCAGTCTGTCTCTCAATCCATGGATCG-CCGTCTGGGTGAATTATCCAAGAANANA 94
consensus_10528#1      GGCCATGGCCTCTCCCTGGTTCCA---ATCGACCATGGATACTGTCTTCCTGAGAGTGTA 332
                         *    * ** ** **   ****   **** ** *          *  *  ***    *

consensus_10528#0      AAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAA 2097
consensus_10528#2      AAAAGTAATGTAAGTATACAAGATTAACTGGTTGCCTCCCTCTACTCATATCATAGATAA 154
consensus_10528#1      AGCACTGACGCTGACAGATTTTTTTC-TTGCTAATTGACTTCCATTTTGTTCGTTGGTGA 391
                       *  * * * *     * *     **   ** *      * ** * *    ** * * * *

consensus_10528#0      ATA-ACGTCAATAAAAAGGGCCAAGCTAAACTAAT-TAAAAGGGACAGAGGAAAAGGTTG 2155
consensus_10528#2      ATA-ACGTCAATAAAAAGGGCCAAGCTAAACTAAT-TAAAAGGGACAGNGGAAAAGGTTG 212
consensus_10528#1      TCATGCATCGATCACGCATGTGGAGTTTGAGGATTGCCCAATAATTTCAGGGGCGGGCCC 451
                         *  * ** ** *     *   ** *  *  * *    **        **    **   

consensus_10528#0      TACTAGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATC 2215
consensus_10528#2      TACTNGTGTACTTGAGTTATAAACTTTTTGTGCAGCTGACAATTGAGTGTACATGTAATC 272
consensus_10528#1      AATTCAATTAATAGGTATTCAAATGAATTCCCAAGATTTTTGAAAAAAATACATATCTTT 511
                        * *    ** * *   *  ***    **    ** *        *   ***** *  * 

consensus_10528#0      AGCAGTGGATTTAAAGGCCTTGAGGGCGTGTACCCTTTTTTTTCTTTCATGTGGTTTAAT 2275
consensus_10528#2      AGCAGTGGATTTAAAGGCCTTGAGGGNGTGTANCCTTTTTTTTCTTTAAAAAAAAAAAAA 332
consensus_10528#1      TTGAAAAAAAT-ACATATATGAAGTATATATTCCCATATGTATATATAGGAAAAAAAAAA 570
                          *    * * * *    *  **    * *  ** * * * * * *          ** 

consensus_10528#0      TATGTGGA------------------------------------------- 2283
consensus_10528#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 383
consensus_10528#1      AAAAAAA-------------------------------------------- 577
                        *                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)