These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10541#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4033 fasta sequence [AGTTAGCCACTCTATTACTACTACCTCCGTTGCCAACGCCGGAATCCATCCATCCATCCCCGCGCCGCGCTGTGCCGCCGCGAGAGCTTTGCGGCGGGCATGCGGGTGGGGATTCACCGCGGGGTGGAAGAAGCTGAAGCAGCAGCTGGTGGCGCAACGCCACGAGGCGCACCCCGCTGGCACCCACACCAACAAAAGGAGAAGATTCTCGCCACCACCACTCCCACTGATCCCCTCTTCTTCCTCCTCGTTCGCCTGCCATCTCCGGAGCCGGAGGAGGAGGAGGAGTAGCCGCCGCCCAGATCTGCGCCGCCATGCTGCCGCTGCTGCGGAGGCGGCGGCTGTGAATAGCTAGGTCGTTTTTATTGTTGTTTTTGGGTTGGTTTGGTTTGATTCCGATGGGGTGCGGGCAGTCGAAGATGGAGGAGGAGTACGCGGTGCGGCACTGCAGGGAGAGGTCGGAGCTGCTCGCCCTCGCCATCCGCCACCGCTACGCGCTCGCCGACACCCACCGTGCCTACGCCGAATCCCTCGCCGCCGTCGGCGCCGTGCTCCACGACTTCCTCCGCGGCGTCCAGTCGCTGCCCCCGCCGCCGCTCGAGCCCACGCTCCGCCTTCCCGCCCACCGCAAGGGCGACAACCTCCCCACCGCCTCCCCCGTCCCGGCCAACCCCGCCATCGCCTCCTCCTCCGCCGCCCAGCCGCTGCCGCCCGTCGCCAAGCAGGTACGAATCGCCGCCGCCCCCGATGACGGCGGCGGCGGCGGCCACATCCACTTCTCGGACGACGACTCCGATTCCGAGGGCGGCGGGCACATCAAGTTCCACTCCGACGACGAGGGCGACGCGCCCGCTCACCGCCGCCCAGAGATCGTCCGCTCCGCCGCGCCGCCGGTGGCTCCGCCGCCGCAGATGGGGCCACCACCACCGTATGGCTCCGGATATGCTCCTCCTCCGCCTTATGGTTCGGGATACGGGTATGGATACGGCCCCGCCCCCGATTACGGCGGCGGCATGGCCGTTGCCAACGGCGGCTATGACCCAGGGTATGGTGGTATGGGCGGAGCCAGTGGCGGCGGCGGCGGCGGCGGCTATGCGCCTGGATATGGAGGCATGGGAGTTGGGGATGGCGGCAGCGGTGGCGGCTATGAGCCAGCCTATGGCGGCATGGGCAGCTATGGCCAAAGCTTCTTCAACATCAGCTATGCGCGCAGCCAGCCGCCTCCGCCGTCCGTCTCATACGAGCACCGGCTGCAGGCCACCGATGCCAGGGTCCACTACTACGCCGGAGAAGGCAACCCTCAAGCACCCCCACTCGGGTATGGCGGTGGGTATGGTTATCCGCCGCAGGGCTCGAGCTCTTACAACCAGTATGCGTACGGTGGTTACTATGGTGGTGCTTCTCCTCCGCCTCCGGCCGATATACCTTCTACCTCCCGCGGGGAGGTTACGCCACCGGCACCTCCATCTCCGCCGAGGGTGTCTACTTGGGACTTCCTGAACCCATTTGAAACCTATGAGAGCTACTATGAGCAGCCAACTGCTGCTCAAGCGTCATACACTCCCAGCAGAAGTTCCAAGGATGTGCGTGAGGAGGAAGGCATACCAGATTTGGAGGATGAGGATATGGAGGTGGTTAAGGAAGCTTATGGTGATGAGAAGCACGCCGCCAATGGGTACAGTGGCAAGGGGAAGATGGCAAAAGAGGAAGGTGGTAGGAGCAGCACCGGGGATGAACTGCCCCATGAATCCAAGTTATCGGAAGCGAGCAGTAGCGGGAGCAACCAGGAGCATGATGTCCATGTAGTGGAGAAGAGTGTTGTGGGAGAACAGGTGCAGCGGTCAGAGCCTCGTCAGCATGTCGCAGGCCTGCCGCCCATAGGATCGGAGAAGACGTACTTTGATGATGCTGAGGTGGTGCTGGAGATCAGGACTCAATTCGAGCGTGCCTCAAAATCTGCCATTGAGGTGTCCAAGATGCTTGAGGTTGGGAAGATGCCTTACTACCCGAAGAGTTCAGGTTTCAAAGTGTCTGCGATGATGATTTGCGGGATACCAACAATGGAGGAAGAGTTCCTGCGGTTTGAAGAAGACAAGGCGATGGGGTGTGGCAATCTTTCCTCAACACTGCAGAAACTGTACATGTGGGAAAAAAAGCTTCTTGAGGAAGTCAAGGCTGAGGAGAAGATGCGGGCGTTGTATGACAGGCAACGTGAGGAGCTGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCATCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACAAGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGTTGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCCATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACTTGATCAAGCGCCTAGAGCTTCAGCATTTGGATT-GGATAGCCTCTTTTGCCTCATGGGTGAATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACATATGAACCTGAGGTAACTGATGATGGTGTGCCTCCTTTTTCTCCTGGACGGCTAGGAGCGCCACCTATTTTTGTCATATATAACAATTGGGCAGTTGGTGTGGGGAGGATATCTGAGAAGGAAGTAGTTGAGGCAATGCAGGCCTTTGCATCTAATGTTCTTGGCCTCTGGGAAAGGCACAGGTCAGAGCAAAGACAAGGTCTTATGGCTAATAAAGGTATGGACAAGGACCTTAGGGTGATGGAAAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCATTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTTCCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGAACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGAAAGCTCGCGTTGCCCAAGAGAGTTGCAGAGTTTCCTAGTTCCTTTCGTGGTTTCCATGTTACATGAGGGCATGAGCCCTTTTTAACGCAAAGGAGCTGACTGCAGTGGTTCAGATGAGCACTATAGTTTGCATGGCAGCGTCACAATTCAAGTGGCAAGTGATGCACCTTGCATGAAATAGCTTCTACCCAGGGCTGCGGGCTGCCAGACAAACCTGTGGCGTAAATGGAGACTTGCTAGATTGTGTTTTTTTGAATTGGAGCAACACTCCTCATGCCATACAGCCCAGGAACTCAATTTTGCTAATAGCTGAATCACAAGACATTGCCGATAGGGGAAGAAAAATCTGAAGTGGCGAGTGACAAGATTCACTCAATGTTGGGAAATCCCAGTAAATAGTTGGAAGATGTAAGCTGCA-TAAACGAAATGCAT-GGTC-TAAGCATGGAGCAGTAAAATGTTCCGATCATGA-GTCCAAGATTCATGAAGTTGTATCCATCCATATGAAATAGTCAAATGTGATCATGCTGCCAGGTTCAGGGAAAGAGTCACTGGAAGAGTGCAACAATGCTAGCATGCCAGTGTACATAGTTGAAGGCAATGCGATATGGGATGAACCAAAGCTGATGCTGTGGGAGATGCTTCCCTCCCAGCTGGGAGGCTGCAGCCTAGCTAGTTCACCTGTTAGGGGAGTGATGGATGATGATGAGCTTGTAGGATAGAGAAAAAAAGTGGATGCCCTGACCCCGTTCTGCAGTTCACTAACTGTTGGATTTTTTTGTTCCGTTATTTATTATACATATAATTCATTTGTATCCCTGTACAGCCGGTGGCTAACTCATAAACCCCCCCTTTTTTGTGTCATGTTTATTCTATTTCTCCCCCATCGACTTTGCCTGTTTCTGCTTCTCTCTCT] [+] EMBL AK100643 [AGTTAGCCACTCTATTACTACTACCTCCGTTGCCAACGCCGGAATCCATCCATCCATCCCCGCGCCGCGCTGTGCCGCCGCGAGAGCTTTGCGGCGGGCATGCGGGTGGGGATTCACCGCGGGGTGGAAGAAGCTGAAGCAGCAGCTGGTGGCGCAACGCCACGAGGCGCACCCCGCTGGCACCCACACCAACAAAAGGAGAAGATTCTCGCCACCACCACTCCCACTGATCCCCTCTTCTTCCTCCTCGTTCGCCTGCCATCTCCGGAGCCGGAGGAGGAGGAGGAGTAGCCGCCGCCCAGATCTGCGCCGCCATGCTGCCGCTGCTGCGGAGGCGGCGGCTGTGAATAGCTAGGTCGTTTTTATTGTTGTTTTTGGGTTGGTTTGGTTTGATTCCGATGGGGTGCGGGCAGTCGAAGATGGAGGAGGAGTACGCGGTGCGGCACTGCAGGGAGAGGTCGGAGCTGCTCGCCCTCGCCATCCGCCACCGCTACGCGCTCGCCGACACCCACCGTGCCTACGCCGAATCCCTCGCCGCCGTCGGCGCCGTGCTCCACGACTTCCTCCGCGGCGTCCAGTCGCTGCCCCCGCCGCCGCTCGAGCCCACGCTCCGCCTTCCCGCCCACCGCAAGGGCGACAACCTCCCCACCGCCTCCCCCGTCCCGGCCAACCCCGCCATCGCCTCCTCCTCCGCCGCCCAGCCGCTGCCGCCCGTCGCCAAGCAGGTACGAATCGCCGCCGCCCCCGATGACGGCGGCGGCGGCGGCCACATCCACTTCTCGGACGACGACTCCGATTCCGAGGGCGGCGGGCACATCAAGTTCCACTCCGACGACGAGGGCGACGCGCCCGCTCACCGCCGCCCAGAGATCGTCCGCTCCGCCGCGCCGCCGGTGGCTCCGCCGCCGCAGATGGGGCCACCACCACCGTATGGCTCCGGATATGCTCCTCCTCCGCCTTATGGTTCGGGATACGGGTATGGATACGGCCCCGCCCCCGATTACGGCGGCGGCATGGCCGTTGCCAACGGCGGCTATGACCCAGGGTATGGTGGTATGGGCGGAGCCAGTGGCGGCGGCGGCGGCGGCGGCTATGCGCCTGGATATGGAGGCATGGGAGTTGGGGATGGCGGCAGCGGTGGCGGCTATGAGCCAGCCTATGGCGGCATGGGCAGCTATGGCCAAAGCTTCTTCAACATCAGCTATGCGCGCAGCCAGCCGCCTCCGCCGTCCGTCTCATACGAGCACCGGCTGCAGGCCACCGATGCCAGGGTCCACTACTACGCCGGAGAAGGCAACCCTCAAGCACCCCCACTCGGGTATGGCGGTGGGTATGGTTATCCGCCGCAGGGCTCGAGCTCTTACAACCAGTATGCGTACGGTGGTTACTATGGTGGTGCTTCTCCTCCGCCTCCGGCCGATATACCTTCTACCTCCCGCGGGGAGGTTACGCCACCGGCACCTCCATCTCCGCCGAGGGTGTCTACTTGGGACTTCCTGAACCCATTTGAAACCTATGAGAGCTACTATGAGCAGCCAACTGCTGCTCAAGCGTCATACACTCCCAGCAGAAGTTCCAAGGATGTGCGTGAGGAGGAAGGCATACCAGATTTGGAGGATGAGGATATGGAGGTGGTTAAGGAAGCTTATGGTGATGAGAAGCACGCCGCCAATGGGTACAGTGGCAAGGGGAAGATGGCAAAAGAGGAAGGTGGTAGGAGCAGCACCGGGGATGAACTGCCCCATGAATCCAAGTTATCGGAAGCGAGCAGTAGCGGGAGCAACCAGGAGCATGATGTCCATGTAGTGGAGAAGAGTGTTGTGGGAGAACAGGTGCAGCGGTCAGAGCCTCGTCAGCATGTCGCAGGCCTGCCGCCCATAGGATCGGAGAAGACGTACTTTGATGATGCTGAGGTGGTGCTGGAGATCAGGACTCAATTCGAGCGTGCCTCAAAATCTGCCATTGAGGTGTCCAAGATGCTTGAGGTTGGGAAGATGCCTTACTACCCGAAGAGTTCAGGTTTCAAAGTGTCTGCGATGATGATTTGCGGGATACCAACAATGGAGGAAGAGTTCCTGCGGTTTGAAGAAGACAAGGCGATGGGGTGTGGCAATCTTTCCTCAACACTGCAGAAACTGTACATGTGGGAAAAAAAGCTTCTTGAGGAAGTCAAGGCTGAGGAGAAGATGCGGGCGTTGTATGACAGGCAACGTGAGGAGCTGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCATCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACAAGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGTTGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCCATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACTTGATCAAGCGCCTAGAGCTTCAGCATTTGGATT GGATAGCCTCTTTTGCCTCATGGGTGAATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACATATGAACCTGAGGTAACTGATGATGGTGTGCCTCCTTTTTCTCCTGGACGGCTAGGAGCGCCACCTATTTTTGTCATATATAACAATTGGGCAGTTGGTGTGGGGAGGATATCTGAGAAGGAAGTAGTTGAGGCAATGCAGGCCTTTGCATCTAATGTTCTTGGCCTCTGGGAAAGGCACAGGTCAGAGCAAAGACAAGGTCTTATGGCTAATAAAGGTATGGACAAGGACCTTAGGGTGATGGAAAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCATTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTTCCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGAACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGAAAGCTCGCGTTGCCCAAGAGAGTTGCAGAGTTTCCTAGTTCCTTTCGTGGTTTCCATGTTACATGAGGGCATGAGCCCTTTTTAACGCAAAGGAGCTGACTGCAGTGGTTCAGATGAGCACTATAGTTTGCATGGCAGCGTCACAATTCAAGTGGCAAGTGATGCACCTTGCATGAAATAGCTTCTACCCAGGGCTGCGGGCTGCCAGACAAACCTGTGGCGTAAATGGAGACTTGCTAGATTGTGTTTTTTTGAATTGGAGCAACACTCCTCATGCCATACAGCCCAGGAACTCAATTTTGCTAATAGCTGAATCACAAGACATTGCCGATAGGGGAAGAAAAATCTGAAGTGGCGAGTGACAAGATTCACTCAATGTTGGGAAATCCCAGTAAATAGTTGGAAGATGTAAGCTGCA TAAACGAAATGCAT GGTC TAAGCATGGAGCAGTAAAATGTTCCGATCATGA GTCCAAGATTCATGAAGTTGTATCCATCCATATGAAATAGTCAAATGTGATCATGCTGCCAGGTTCAGGGAAAGAGTCACTGGAAGAGTGCAACAATGCTAGCATGCCAGTGTACATAGTTGAAGGCAATGCGATATGGGATGAACCAAAGCTGATGCTGTGGGAGATGCTTCCCTCCCAGCTGGGAGGCTGCAGCCTAGCTAGTTCACCTGTTAGGGGAGTGATGGATGATGATGAGCTTGTAGGATAGAGAAAAAAAGTGGATGCCCTGACCCCGTTCTGCAGTTCACTAACTGTTGGATTTTTTTGTTCCGTTATTTATTATACATATAATTCATTTGTATCCCTGTACAGCCGGTGGCTAACTCATAAACCCCCCCTTTTTTGTGTCATGTTTATTCTATTTCTCCCCCATCGACTTTGCCTGTTTCTGCTTCTCTCTCT] [+] EMBL AK102669 [ GCATGGGAGTTGGGGATGGCGGCAGCGGTGGCGGCTATGAGCCAGCCTATGGCGGCATGGGCAGCTATGGCCAAAGCTTCTTCAACATCAGCTATGCGCGCAGCCAGCCGCCTCCGCCGTCCGTCTCATACGAGCACCGGCTGCAGGCCACCGATGCCAGGGTCCACTACTACGCCGGAGAAGGCAACCCTCAAGCACCCCCACTCGGGTATGGCGGTGGGTATGGTTATCCGCCGCAGGGCTCGAGCTCTTACAACCAGTATGCGTACGGTGGTTACTATGGTGGTGCTTCTCCTCCGCCTCCGGCCGATATACCTTCTACCTCCCGCGGGGAGGTTACGCCACCGGCACCTCCATCTCCGCCGAGGGTGTCTACTTGGGACTTCCTGAACCCATTTGAAACCTATGAGAGCTACTATGAGCAGCCAACTGCTGCTCAAGCGTCATACACTCCCAGCAGAAGTTCCAAGGATGTGCGTGAGGAGGAAGGCATACCAGATTTGGAGGATGAGGATATGGAGGTGGTTAAGGAAGCTTATGGTGATGAGAAGCACGCCGCCAATGGGTACAGTGGCAAGGGGAAGATGGCAAAAGAGGAAGGTGGTAGGAGCAGCACCGGGGATGAACTGCCCCATGAATCCAAGTTATCGGAAGCGAGCAGTAGCGGGAGCAACCAGGAGCATGATGTCCATGTAGTGGAGAAGAGTGTTGTGGGAGAACAGGTGCAGCGGTCAGAGCCTCGTCAGCATGTCGCAGGCCTGCCGCCCATAGGATCGGAGAAGACGTACTTTGATGATGCTGAGGTGGTGCTGGAGATCAGGACTCAATTCGAGCGTGCCTCAAAATCTGCCATTGAGGTGTCCAAGATGCTTGAGGTTGGGAAGATGCCTTACTACCCGAAGAGTTCAGGTTTCAAAGTGTCTGCGATGATGATTTGCGGGATACCAACAATGGAGGAAGAGTTCCTGCGGTTTGAAGAAGACAAGGCGATGGGGTGTGGCAATCTTTCCTCAACACTGCAGAAACTGTACATGTGGGAAAAAAAGCTTCTTGAGGAAGTCAAGGCTGAGGAGAAGATGCGGGCGTTGTATGACAGGCAACGTGAGGAGCTGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCATCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACAAGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGTTGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCCATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACTTGATCAAGCGCCTAGAGCTTCAGCATTTGGATT GGATAGCCTCTTTTGCCTCATGGGTGAATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACATATGAACCTGAGGTAACTGATGATGGTGTGCCTCCTTTTTCTCCTGGACGGCTAGGAGCGCCACCTATTTTTGTCATATATAACAATTGGGCAGTTGGTGTGGGGAGGATATCTGAGAAGGAAGTAGTTGAGGCAATGCAGGCCTTTGCATCTAATGTTCTTGGCCTCTGGGAAAGGCACAGGTCAGAGCAAAGACAAGGTCTTATGGCTAATAAAGGTATGGACAAGGACCTTAGGGTGATGGAAAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCATTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTTCCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGAACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGAAAGCTCGCGTTGCCCAAGAGAGTTGCAGAGTTTCCTAGTTCCTTTCGTGGTTTCCATGTTACATGAGGGCATGAGCCCTTTTTAACGCAAAGGAGCTGACTGCAGTGGTTCAGATGAGCACTATAGTTTGCATGGCAGCGTCACAATTCAAGTGGCAAGTGATGCACCTTGCATGAAATAGCTTCTACCCAGGGCTGCGGGCTGCCAGACAAACCTGTGGCGTAAATGGAGACTTGCTAGATTGTGTTTTTTTGAATTGGAGCAACACTCCTCATGCCATACAGCCCAGGAACTCAATTTTGCTAATAGCTGAATCACAAGACATTGCCGATAGGGGAAGAAAAATCTGAAGTGGCGAGTGACAAGATTCACTCAATGTTGGGAAATCCCAGTAAATAGTTGGAAGATGTAAGCTGCA TAAACGAAATGCAT GGTC TAAGCATGGAGCAGTAAAATGTTCCGATCATGA GTCCAAGATTCATGAAGTTGTATCCATCCATATGAAATAGTCAAATGTGATCATGCTGCCAGGTTCAGGGAAAGAGTCACTGGAAGAGTGCAACAATGCTAGCATGCCAGTGTACATAGTTGAAGGCAATGCGATATGGGATGAACCAAAGCTGATGCTGTGGGAGATGCTTCCCTCCCAGCTGGGAGGCTGCAGCCTAGCTAGTTCACCTGTTAGGGGAGTGATGGATGATGATGAGCTTGTAGGATAGAGAAAAAAAGTGGATGCCCTGACCCCGTTCTGCAGTTCACTAACTGTTGGATTTTTTTGTTCCGTTATTTATTATACATATAATTCATTTGTATCCCTGTACAGCCGGTGGCTAACTCATAAACCCCCCCT ] [+] EMBL AU064262 [ GATGCGGGCGTTGTATGACAGGCAACGTGAGGAGCTGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCATCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACAAGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGTTGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCCATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACTTGATCAAGCGCCTAGAGCTTCAGCATTTGGATTGGGATAGCCTCTTTTGCCTCATGGGTGAATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACAT ] [+] EMBL CF327806 [ AAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCATTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTTCCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGAACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGAAAGCTCGCGTTGCCCAAGAGAGTTGTAGAGTTTCCTAGTTCCTTTCGTGGTTTCCATGTTACATGAGGGCATGAGCCCTTTTTAACGCAAAGGAGCTGACTGCAGTGGTTCAGATGAGCACTATAGTTTGCATGGCAGCGTCACAATTCAAGTGGCAAGTGATGCACCTTGCATGAAATAGCTTCTACCCAGGGCTGCGGGCTGCCAGACAAACCTGTGGCGTAAATGGAGACTTGCTAGATTGTGTTTTTTTGAATTGGAGCAACACTCCTCATGCCATACAGCCCAGGAACTCAATTTTGCTAATAGCTGAATCACAAGACATTGCCGATAGGGGAAGAA ] [+] EMBL D43342 [ TTGCATGGCAGCGTCACAATTCAAGTGGCAAGTNATGCACCTTGCATGAAATAGCTTCTACCCAGGGCTGCGGGCTGCCAGACAAACCTGTGGCGTAAATGGAGACTTGCTAGATTGTGTTTTTTTGAATTGGAGCAACACTCCTCATGCCATACAGCCCAGGAACTCAATTTTGCTAATAGCTGAATCACAAGACATTGCCGATAGGGGAAGAAAAATCTGAAGTGGCGAGTGACAAGATTCACTCAATGTTGGGAANTNCCAGTAAATAGTTGGAAGNTGTAAGCTGCATTAAACGNAATGCATGGGTCTTAAGCATGTGGCNGTAAAATGTTCCCNTCATGAGGTCC ] [+] EMBL BI802140 [ AGCCTAGCTAGTTCACCTGTTAGGGGAGTGATGGATGATGATGAGCTTGTAGGATAGAGAAAAAAAGTGGATGCCCTGACCCCGTTCTGCAGTTCACTAACTGTTGGATTTTTTTGTTCCGTTATTTATTATACATATAATTCATTTGTAaaaa ] consensusID : consensus_10541#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 323 fasta sequence [TTAGCATGCCAGTGTACATAGTTGAAGGCAATGCGATATGGGATGAACCAAAGCTGATGCTGTGGGAAATGTTTCCCTCCCAGTTGGGAGGTTGCAGCCTAGTTAGTTCCCCTGTTAGGGGAGTGATGGATAATAATGAGCTTGTAGGATAAAAAAAAAAAGTGGATGCCCTGACCCCGTTTTGCAGTTCACTAACTGTTGGATTTTTTTGTTCCGTTATTTATTAAACAAATAATTCATTTGTATCCCTGTACAGCCGGTGGTTAATTCATAAACCCCCCCTTTTTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF327807 [TTAGCATGCCAGTGTACATAGTTGAAGGCAATGCGATATGGGATGAACCAAAGCTGATGCTGTGGGAAATGTTTCCCTCCCAGTTGGGAGGTTGCAGCCTAGTTAGTTCCCCTGTTAGGGGAGTGATGGATAATAATGAGCTTGTAGGATAAAAAAAAAAAGTGGATGCCCTGACCCCGTTTTGCAGTTCACTAACTGTTGGATTTTTTTGTTCCGTTATTTATTAAACAAATAATTCATTTGTATCCCTGTACAGCCGGTGGTTAATTCATAAACCCCCCCTTTTTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10541#0 AGTTAGCCACTCTATTACTACTACCTCCGTTGCCAACGCCGGAATCCATCCATCCATCCC 60 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CGCGCCGCGCTGTGCCGCCGCGAGAGCTTTGCGGCGGGCATGCGGGTGGGGATTCACCGC 120 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GGGGTGGAAGAAGCTGAAGCAGCAGCTGGTGGCGCAACGCCACGAGGCGCACCCCGCTGG 180 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CACCCACACCAACAAAAGGAGAAGATTCTCGCCACCACCACTCCCACTGATCCCCTCTTC 240 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TTCCTCCTCGTTCGCCTGCCATCTCCGGAGCCGGAGGAGGAGGAGGAGTAGCCGCCGCCC 300 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AGATCTGCGCCGCCATGCTGCCGCTGCTGCGGAGGCGGCGGCTGTGAATAGCTAGGTCGT 360 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TTTTATTGTTGTTTTTGGGTTGGTTTGGTTTGATTCCGATGGGGTGCGGGCAGTCGAAGA 420 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGGAGGAGGAGTACGCGGTGCGGCACTGCAGGGAGAGGTCGGAGCTGCTCGCCCTCGCCA 480 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TCCGCCACCGCTACGCGCTCGCCGACACCCACCGTGCCTACGCCGAATCCCTCGCCGCCG 540 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TCGGCGCCGTGCTCCACGACTTCCTCCGCGGCGTCCAGTCGCTGCCCCCGCCGCCGCTCG 600 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AGCCCACGCTCCGCCTTCCCGCCCACCGCAAGGGCGACAACCTCCCCACCGCCTCCCCCG 660 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TCCCGGCCAACCCCGCCATCGCCTCCTCCTCCGCCGCCCAGCCGCTGCCGCCCGTCGCCA 720 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AGCAGGTACGAATCGCCGCCGCCCCCGATGACGGCGGCGGCGGCGGCCACATCCACTTCT 780 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CGGACGACGACTCCGATTCCGAGGGCGGCGGGCACATCAAGTTCCACTCCGACGACGAGG 840 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GCGACGCGCCCGCTCACCGCCGCCCAGAGATCGTCCGCTCCGCCGCGCCGCCGGTGGCTC 900 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CGCCGCCGCAGATGGGGCCACCACCACCGTATGGCTCCGGATATGCTCCTCCTCCGCCTT 960 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATGGTTCGGGATACGGGTATGGATACGGCCCCGCCCCCGATTACGGCGGCGGCATGGCCG 1020 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TTGCCAACGGCGGCTATGACCCAGGGTATGGTGGTATGGGCGGAGCCAGTGGCGGCGGCG 1080 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GCGGCGGCGGCTATGCGCCTGGATATGGAGGCATGGGAGTTGGGGATGGCGGCAGCGGTG 1140 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GCGGCTATGAGCCAGCCTATGGCGGCATGGGCAGCTATGGCCAAAGCTTCTTCAACATCA 1200 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GCTATGCGCGCAGCCAGCCGCCTCCGCCGTCCGTCTCATACGAGCACCGGCTGCAGGCCA 1260 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CCGATGCCAGGGTCCACTACTACGCCGGAGAAGGCAACCCTCAAGCACCCCCACTCGGGT 1320 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATGGCGGTGGGTATGGTTATCCGCCGCAGGGCTCGAGCTCTTACAACCAGTATGCGTACG 1380 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GTGGTTACTATGGTGGTGCTTCTCCTCCGCCTCCGGCCGATATACCTTCTACCTCCCGCG 1440 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GGGAGGTTACGCCACCGGCACCTCCATCTCCGCCGAGGGTGTCTACTTGGGACTTCCTGA 1500 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ACCCATTTGAAACCTATGAGAGCTACTATGAGCAGCCAACTGCTGCTCAAGCGTCATACA 1560 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CTCCCAGCAGAAGTTCCAAGGATGTGCGTGAGGAGGAAGGCATACCAGATTTGGAGGATG 1620 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AGGATATGGAGGTGGTTAAGGAAGCTTATGGTGATGAGAAGCACGCCGCCAATGGGTACA 1680 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GTGGCAAGGGGAAGATGGCAAAAGAGGAAGGTGGTAGGAGCAGCACCGGGGATGAACTGC 1740 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CCCATGAATCCAAGTTATCGGAAGCGAGCAGTAGCGGGAGCAACCAGGAGCATGATGTCC 1800 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATGTAGTGGAGAAGAGTGTTGTGGGAGAACAGGTGCAGCGGTCAGAGCCTCGTCAGCATG 1860 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TCGCAGGCCTGCCGCCCATAGGATCGGAGAAGACGTACTTTGATGATGCTGAGGTGGTGC 1920 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGGAGATCAGGACTCAATTCGAGCGTGCCTCAAAATCTGCCATTGAGGTGTCCAAGATGC 1980 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TTGAGGTTGGGAAGATGCCTTACTACCCGAAGAGTTCAGGTTTCAAAGTGTCTGCGATGA 2040 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGATTTGCGGGATACCAACAATGGAGGAAGAGTTCCTGCGGTTTGAAGAAGACAAGGCGA 2100 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGGGGTGTGGCAATCTTTCCTCAACACTGCAGAAACTGTACATGTGGGAAAAAAAGCTTC 2160 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TTGAGGAAGTCAAGGCTGAGGAGAAGATGCGGGCGTTGTATGACAGGCAACGTGAGGAGC 2220 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCA 2280 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACA 2340 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGT 2400 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCC 2460 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACT 2520 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGATCAAGCGCCTAGAGCTTCAGCATTTGGATTGGATAGCCTCTTTTGCCTCATGGGTGA 2580 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACATATG 2640 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AACCTGAGGTAACTGATGATGGTGTGCCTCCTTTTTCTCCTGGACGGCTAGGAGCGCCAC 2700 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CTATTTTTGTCATATATAACAATTGGGCAGTTGGTGTGGGGAGGATATCTGAGAAGGAAG 2760 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TAGTTGAGGCAATGCAGGCCTTTGCATCTAATGTTCTTGGCCTCTGGGAAAGGCACAGGT 2820 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CAGAGCAAAGACAAGGTCTTATGGCTAATAAAGGTATGGACAAGGACCTTAGGGTGATGG 2880 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AAAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCA 2940 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTT 3000 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGA 3060 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGA 3120 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AAGCTCGCGTTGCCCAAGAGAGTTGCAGAGTTTCCTAGTTCCTTTCGTGGTTTCCATGTT 3180 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ACATGAGGGCATGAGCCCTTTTTAACGCAAAGGAGCTGACTGCAGTGGTTCAGATGAGCA 3240 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 CTATAGTTTGCATGGCAGCGTCACAATTCAAGTGGCAAGTGATGCACCTTGCATGAAATA 3300 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GCTTCTACCCAGGGCTGCGGGCTGCCAGACAAACCTGTGGCGTAAATGGAGACTTGCTAG 3360 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATTGTGTTTTTTTGAATTGGAGCAACACTCCTCATGCCATACAGCCCAGGAACTCAATTT 3420 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 TGCTAATAGCTGAATCACAAGACATTGCCGATAGGGGAAGAAAAATCTGAAGTGGCGAGT 3480 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 GACAAGATTCACTCAATGTTGGGAAATCCCAGTAAATAGTTGGAAGATGTAAGCTGCATA 3540 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AACGAAATGCATGGTCTAAGCATGGAGCAGTAAAATGTTCCGATCATGAGTCCAAGATTC 3600 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 ATGAAGTTGTATCCATCCATATGAAATAGTCAAATGTGATCATGCTGCCAGGTTCAGGGA 3660 consensus_10541#1 ------------------------------------------------------------ consensus_10541#0 AAGAGTCACTGGAAGAGTGCAACAATGCTAGCATGCCAGTGTACATAGTTGAAGGCAATG 3720 consensus_10541#1 ---------------------------TTAGCATGCCAGTGTACATAGTTGAAGGCAATG 33 ******************************** consensus_10541#0 CGATATGGGATGAACCAAAGCTGATGCTGTGGGAGATGCTTCCCTCCCAGCTGGGAGGCT 3780 consensus_10541#1 CGATATGGGATGAACCAAAGCTGATGCTGTGGGAAATGTTTCCCTCCCAGTTGGGAGGTT 93 ********************************** *** *********** ******* * consensus_10541#0 GCAGCCTAGCTAGTTCACCTGTTAGGGGAGTGATGGATGATGATGAGCTTGTAGGATAGA 3840 consensus_10541#1 GCAGCCTAGTTAGTTCCCCTGTTAGGGGAGTGATGGATAATAATGAGCTTGTAGGATAAA 153 ********* ****** ********************* ** **************** * consensus_10541#0 GAAAAAAAGTGGATGCCCTGACCCCGTTCTGCAGTTCACTAACTGTTGGATTTTTTTGTT 3900 consensus_10541#1 AAAAAAAAGTGGATGCCCTGACCCCGTTTTGCAGTTCACTAACTGTTGGATTTTTTTGTT 213 *************************** ******************************* consensus_10541#0 CCGTTATTTATTATACATATAATTCATTTGTATCCCTGTACAGCCGGTGGCTAACTCATA 3960 consensus_10541#1 CCGTTATTTATTAAACAAATAATTCATTTGTATCCCTGTACAGCCGGTGGTTAATTCATA 273 ************* *** ******************************** *** ***** consensus_10541#0 AACCCCCCCTTTTTTGTGTCATGTTTATTCTATTTCTCCCCCATCGACTTTGCCTGTTTC 4020 consensus_10541#1 AACCCCCCCTTTTTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------- 323 ********************* * * * * consensus_10541#0 TGCTTCTCTCTCT 4033 consensus_10541#1 ------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||