These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10546#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2328 fasta sequence [CTTGCTGCACAGCTTATTTTTTTTCAAGAATGACCAAAAGAATTACATGTTAATATATTATAAGAAGAGAGCAAAGTTTAGTTACGCAACGCAAACGGTCAGAAAAGCCGTTGTCAGGGGCCAAGGAAAAAAAAAAGAAACCAAAAACAAATACAGAAAAGATTAGCCACTGAGAAAGAAAAACTCGTTTCTGGACATCTGCAGATGCATTCTTTCTTTGAAGGACAGGTTTTTCTGGCAAAAAATAAAAAGAACTTCAGTTGGATGAACTAATTAAGCAGAAGCCCTAATGTACAATTCCTGGCTTAACCTGCCCATAATTGAGGTAAATAATCGTCGCCACTACATTGTCTCGGCCTAATGGAAGTTAAAAATGTCTTGACTGAATATGAGAAGCTGTAGCTGCAAAGTTCAGAAATCGAATACCCTGATGAATGCTGCATGCCATCCTGGCTTTCCAGTGCTCCCTTTCTGAGCTGAGCCCCTAGCTGCTCATGTCTTTCTGGTGCCTGCCATCTGCCATTGTCACACTGCCTCATGGGCCCCACCTGTCAGTGACACATGGGAGTGGCAGTGTGTGCGTGTCATCTGAAGAACCCATTATATCCTGTGGCCATGTTAGAGTCTTCAGTTTAGCCGGTCCCTTCCATCTTCTCCTTGCAGATGATGATGGATGCTTTGCTTCTGCTGCATGCTATCCTGCCTGCTTGATCCAACGTCGCCTGCGACCATGTCGGAAGCTTACGAGACACCGGCTGCCGCTCTAACCTAATTCCACTGCAGATGAGAGGGGCCCTGCAAGCTTTGTGTACGTCCATGTCTGTGCCTGATGGCATCCTGTTCCTGTCCATGCCTGTGCATACCACAGATGCAGGCTGAGAAGAGAAGAAACTGCTCACAAGATACACAGAAACTTGGGGCTAAGTACAGGACAGAATGTGCACAGCACACACACATTGTGAAGGAAATTGAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTGCAAAGGGAAGACCATGTGGTCATCAACATTTGGGTAACATACGTACCGTTGGATGACAAAACCCAAAGTTATAGCAAGATTTGTCCCTGAATAACACATGGGAATCATGACATTTGTGGTACTGTGATGCATACAATGGTAGCTAAGCATGGAAGACTTGCCCTAGAGTGAGCTAATTTAGAACTCTTAACATCATCATTGAACTCTTAAAATAAAAATTAAGTTGCAGTAACAAGCCAACAGCTGTACAACATTTAGCCTCAAACTGAAAAGTTCGGTACATCATATCTTGTCCAAGAAGCGAGATGCTTGTATTTCAAATAGAAAAAAGCATACCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCAAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTCTGAAAGCAAAACCACAATATAAAGAAAGGAAGAGAAGGGTATAGCAGGGTGTACATATAGTTCTTAAGTTATCACAGACTAGTTTATTTTTTTACTCCATTTCATTTGCACTCTTTATTTTGATACACAGCAGGTTTCAAGACATATGGAGAGCAAAATCCGATGAC] [+] EMBL AK069470 [CTTGCTGCACAGCTTATTTTTTTTCAAGAATGACCAAAAGAATTACATGTTAATATATTATAAGAAGAGAGCAAAGTTTAGTTACGCAACGCAAACGGTCAGAAAAGCCGTTGTCAGGGGCCAAGGAAAAAAAAAAGAAACCAAAAACAAATACAGAAAAGATTAGCCACTGAGAAAGAAAAACTCGTTTCTGGACATCTGCAGATGCATTCTTTCTTTGAAGGACAGGTTTTTCTGGCAAAAAATAAAAAGAACTTCAGTTGGATGAACTAATTAAGCAGAAGCCCTAATGTACAATTCCTGGCTTAACCTGCCCATAATTGAGGTAAATAATCGTCGCCACTACATTGTCTCGGCCTAATGGAAGTTAAAAATGTCTTGACTGAATATGAGAAGCTGTAGCTGCAAAGTTCAGAAATCGAATACCCTGATGAATGCTGCATGCCATCCTGGCTTTCCAGTGCTCCCTTTCTGAGCTGAGCCCCTAGCTGCTCATGTCTTTCTGGTGCCTGCCATCTGCCATTGTCACACTGCCTCATGGGCCCCACCTGTCAGTGACACATGGGAGTGGCAGTGTGTGCGTGTCATCTGAAGAACCCATTATATCCTGTGGCCATGTTAGAGTCTTCAGTTTAGCCGGTCCCTTCCATCTTCTCCTTGCAGATGATGATGGATGCTTTGCTTCTGCTGCATGCTATCCTGCCTGCTTGATCCAACGTCGCCTGCGACCATGTCGGAAGCTTACGAGACACCGGCTGCCGCTCTAACCTAATTCCACTGCAGATGAGAGGGGCCCTGCAAGCTTTGTGTACGTCCATGTCTGTGCCTGATGGCATCCTGTTCCTGTCCATGCCTGTGCATACCACAGATGCAGGCTGAGAAGAGAAGAAACTGCTCACAAGATACACAGAAACTTGGGGCTAAGTACAGGACAGAATGTGCACAGCACACACACATTGTGAAGGAAATTGAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTGCAAAGGGAAGACCATGTGGTCATCAACATTTGGGTAACATACGTACCGTTGGATGACAAAACCCAAAGTTATAGCAAGATTTGTCCCTGAATAACACATGGGAATCATGACATTTGTGGTACTGTGATGCATACAATGGTAGCTAAGCATGGAAGACTTGCCCTAGAGTGAGCTAATTTAGAACTCTTAACATCATCATTGAACTCTTAAAATAAAAATTAAGTTGCAGTAACAAGCCAACAGCTGTACAACATTTAGCCTCAAACTGAAAAGTTCGGTACATCATATCTTGTCCAAGAAGCGAGATGCTTGTATTTCAAATAGAAAAAAGCATACCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCAAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTCTGAAAGCAAAACCACAATATAAAGAAAGGAAGAGAAGGGTATAGCAGGGTGTACATATAGTTCTTAAGTTATCACAGACTAGTTTATTTTTTTACTCCATTTCATTTGCACTCTTTATTTTGATACACAGCAGGTTTCAAGACATATGGAGAGCAAAATCCGATGAC] consensusID : consensus_10546#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1857 fasta sequence [GAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGAT-GGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCA-AAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATGCATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTATCAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCATGGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGAACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGATAATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGATTCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAAGGAACTCCTTCACACCTTGTCTAGATTGTAACGACAGCAACTTCACAGCAACATCTGTTCCATCCTTGAGAGTTCCCTTGTATACAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTTGCCTTAGCCAGCTCCTTATAGCTGTATCTTGTTATGTTCTCAGCACCAGAGAAGACTTCA-TTATATGGATCACTTTGTTGC-TGCCCGGTCC-TTGACCTC-TTGAAAAAGAGAGAAAAACAAC-TCATCACTGAGATGTTTCAAGCTATGG-AAAACACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAGGAGGAGTTTCTACTCCTCAGCCATGTCAG] [-] EMBL AK103523 [GAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGAT GGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCA AAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATGCATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTATCAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCATGGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGAACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGATAATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGATTCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAAGGAACTCCTTCACACCTTGTCTAGATTGTAACGACAGCAACTTCACAGCAACATCTGTTCCATCCTTGAGAGTTCCCTTGTATACAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTTGCCTTAGCCAGCTCCTTATAGCTGTATCTTGTTATGTTCTCAGCACCAGAGAAGACTTCA TTATATGGATCACTTTGTTGC TGCCCGGTCC TTGACCTC TTGAAAAAGAGAGAAAAACAAC TCATCACTGAGATGTTTCAAGCTATGG AAAACACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAGGAG ] [-] EMBL AU091524 [ ttttTTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTNGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATANATATATATATNTNTNTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGNATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGANGACGAGGGAGTTNAGCGCGCCATGATGGGAGGT ] [-] EMBL CF304128 [ TTCCATGTCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCANAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATGCATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTATCAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCATGGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGAACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGATAATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGATTCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAA ] [-] EMBL CF318310 [ TTGTATACAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTTGCCTTAGCCAGCTCCTTATAGCTGTATCTTGTTATGTTCTCAGCACCAGAGAAGACTTCA TTATATGGATCACTTTGTTGC TGCCCGGTCC TTGACCTC TTGAAAAAGAGAGAAAAACAAC TCATCACTGAGATGTTTCAAGCTATGG AAAACACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAAAAGGAGTTTCTACTCCTCAGCCATGTCAG] [-] EMBL C26100 [ ggCTTCATTTATATGGATCACTTTGTTGCTTGCCCGGTCCTTTGACCTCTTTGAAAAAGAGAGAAAAACAACTTCATNACTGAGATGTTTCAAGCTATGGAAAAANACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATNATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGNCGGCTT TCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCAC CCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGAT ] consensusID : consensus_10546#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 766 fasta sequence [TCGCTTCGGGGCGAGAAGAAAAACCTGCCATTTTTCAATCTGCCGGAGCAGACATTTTCCTCTGCCGCGCGCGGCGTGGGCCGGCCGGGTCTCGACTGGCGCCGGAGGCGGAAGCCGTCGGGTTCTTCGATCTTTCTCGCTTGCCGGTTTCGACTGGAGATCGTCGGTTTCGCCGCTTGGATCGAGTAATCAATCACTCCGTACTAGATACCAGCATAGATATTCTGTCATGTGACTGTTCAGTGCCACTTCCATGGGGGCATGGGGCATGGGTTACAATCCCTTGTTCTGCATCACGATGAAAGCAAATGATGTGCCTCCGGTCCCGGAAGATACCCTTTTGTTATTGATTGATCCAGTTTGGGATACAATGGCTGTTGCTGAACATCTATGATCTCTGTGTGCATACATCGAACAACATCTCAATTAAGCCAGGCACAACACAGTTGTGTTTTCCATAGCTTGAAACATCTCAGTGATGAGTTGTTTTTCTCTCTTTTTCAAGAGGTCAAGGACCGGGCAGCAACAAAGTGATCCATATAATGAAGTCTTCTCTGGTGCTGAGAACATAACAAGATACAGCTATAAGGAGCTGGCTAAGGCAACACTGAATTTTGACCAATCCAATAAGATTGGTGAGGGAGGTTTTGGACCTGTATACAAAGGAACTCTCAAGGATGGAACAGATGTTGCTGTAAAGTTGCTGTCGTTACAATCTAGACAAGGTGTGAAGGAGTTCCTTAATGAACTTATGGCAATCTCTGAC] [+] EMBL CB619125 [TCGCTTCGGGGCGAGAAGAAAAACCTGCCATTTTTCAATCTGCCGGAGCAGACATTTTCCTCTGCCGCGCGCGGCGTGGGCCGGCCGGGTCTCGACTGGCGCCGGAGGCGGAAGCCGTCGGGTTCTTCGATCTTTCTCGCTTGCCGGTTTCGACTGGAGATCGTCGGTTTCGCCGCTTGGATCGAGTAATCAATCACTCCGTACTAGATACCAGCATAGATATTCTGTCATGTGACTGTTCAGTGCCACTTCCATGGGGGCATGGGGCATGGGTTACAATCCCTTGTTCTGCATCACGATGAAAGCAAATGATGTGCCTCCGGTCCCGGAAGATACCCTTTTGTTATTGATTGATCCAGTTTGGGATACAATGGCTGTTGCTGAACATCTATGATCTCTGTGTGCATACATCGAACAACATCTCAATTAAGCCAGGCACAACACAGTTGTGTTTTCCATAGCTTGAAACATCTCAGTGATGAGTTGTTTTTCTCTCTTTTTCAAGAGGTCAAGGACCGGGCAGCAACAAAGTGATCCATATAATGAAGTCTTCTCTGGTGCTGAGAACATAACAAGATACAGCTATAAGGAGCTGGCTAAGGCAACACTGAATTTTGACCAATCCAATAAGATTGGTGAGGGAGGTTTTGGACCTGTATACAAAGGAACTCTCAAGGATGGAACAGATGTTGCTGTAAAGTTGCTGTCGTTACAATCTAGACAAGGTGTGAAGGAGTTCCTTAATGAACTTATGGCAATCTCTGAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10546#0 CTTGCTGCACAGCTTATTTTTTTTCAAGAATGACCAAAAGAATTACATGTTAATATATTA 60 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 TAAGAAGAGAGCAAAGTTTAGTTACGCAACGCAAACGGTCAGAAAAGCCGTTGTCAGGGG 120 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 CCAAGGAAAAAAAAAAGAAACCAAAAACAAATACAGAAAAGATTAGCCACTGAGAAAGAA 180 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 AAACTCGTTTCTGGACATCTGCAGATGCATTCTTTCTTTGAAGGACAGGTTTTTCTGGCA 240 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 AAAAATAAAAAGAACTTCAGTTGGATGAACTAATTAAGCAGAAGCCCTAATGTACAATTC 300 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 CTGGCTTAACCTGCCCATAATTGAGGTAAATAATCGTCGCCACTACATTGTCTCGGCCTA 360 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ATGGAAGTTAAAAATGTCTTGACTGAATATGAGAAGCTGTAGCTGCAAAGTTCAGAAATC 420 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GAATACCCTGATGAATGCTGCATGCCATCCTGGCTTTCCAGTGCTCCCTTTCTGAGCTGA 480 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GCCCCTAGCTGCTCATGTCTTTCTGGTGCCTGCCATCTGCCATTGTCACACTGCCTCATG 540 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GGCCCCACCTGTCAGTGACACATGGGAGTGGCAGTGTGTGCGTGTCATCTGAAGAACCCA 600 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 TTATATCCTGTGGCCATGTTAGAGTCTTCAGTTTAGCCGGTCCCTTCCATCTTCTCCTTG 660 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 CAGATGATGATGGATGCTTTGCTTCTGCTGCATGCTATCCTGCCTGCTTGATCCAACGTC 720 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GCCTGCGACCATGTCGGAAGCTTACGAGACACCGGCTGCCGCTCTAACCTAATTCCACTG 780 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 CAGATGAGAGGGGCCCTGCAAGCTTTGTGTACGTCCATGTCTGTGCCTGATGGCATCCTG 840 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 TTCCTGTCCATGCCTGTGCATACCACAGATGCAGGCTGAGAAGAGAAGAAACTGCTCACA 900 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 AGATACACAGAAACTTGGGGCTAAGTACAGGACAGAATGTGCACAGCACACACACATTGT 960 consensus_10546#1 ------------------------------------------------------------ consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GAAGGAAATTGAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATG 1020 consensus_10546#1 ----------GAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATG 50 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 TATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACAC 1080 consensus_10546#1 TATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACAC 110 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 TTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATAT 1140 consensus_10546#1 TTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATAT 170 consensus_10546#2 -----------TCGCTTCGGGGCGAGAAGAAAAACCTGCCATTTTTCAATCTGCCGGAGC 49 * ** * * *** ** * * * ** * consensus_10546#0 ATGTGTGTGTGTGTGT-GTGTGTG-TGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGG 1198 consensus_10546#1 ATGTGTGTGTGTGTGT-GTGTGTG-TGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGG 228 consensus_10546#2 AGACATTTTCCTCTGCCGCGCGCGGCGTGGGCCGGCCGGGTCTCGACTGGCGCCGGAGGC 109 * * * * ** * * * * *** * ** ** * * * * * * consensus_10546#0 GGATGATG-CAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATA-ATATCGT 1256 consensus_10546#1 GGATGATG-CAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATA-ATATCGT 286 consensus_10546#2 GGAAGCCGTCGGGTTCTTC-----GATCTTTCTCGCTTGCCGGTTTCGACTGGAGATCGT 164 *** * * * **** * **** * * ** * * * ***** consensus_10546#0 CTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCG 1316 consensus_10546#1 CTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCG 346 consensus_10546#2 CGGTTTCGCCGCTTGGATCGA-GTAATCAATCACTCCGTACTAGATACC-AGCATAGATA 222 * * * ** ** * ** **** *** *** * ** consensus_10546#0 GTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGT 1376 consensus_10546#1 GTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGT 406 consensus_10546#2 TTCTGTCATG----TGACTGTTC----AGTGCCACTTCCATGGGGGCATGGGGCATGGGT 274 ** * *** **** ** **** * * * * * * * ** consensus_10546#0 TGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTT 1436 consensus_10546#1 TGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTT 466 consensus_10546#2 TACAATC-CCTTGTTCTGCATCACGATGAAAGCAAATGATGTGCCTCCGGTCCCGGA--- 330 * * ** ** * *** * * * * ****** * * *** * consensus_10546#0 GAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCAT 1496 consensus_10546#1 GAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCAT 526 consensus_10546#2 AGATACCCTTTTGTTATTGATTG-ATCCAGTTTGG-GATACAATGGCTGTTGCTGAACAT 388 **** * ***** *** * *** *** * *** * *** consensus_10546#0 CTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTG 1556 consensus_10546#1 CTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTG 586 consensus_10546#2 CTATGATCTCTGTGTGCATACATCGAACAACATCTCAATTAAGC---CAGGCACAACACA 445 ** * ** * *** * * * **** * * * * * consensus_10546#0 GGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGAC 1616 consensus_10546#1 GGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGAC 646 consensus_10546#2 GTTGTGTTTTCCATAG--CTTGAAACATCTCAGTGATGAGTTGTTTTTCTC-TCTTTTTC 502 * ** * * ** ** **** * * ** * * * * ** * * consensus_10546#0 CATAGAGCTGTCTATGGCCTTCTCCAAA-CACCCCTGATCATAACATTTCCATGTCTGCA 1675 consensus_10546#1 CATAGAGCTGTCTATGGCCTTCTCCAAA-CACCCCTGATCATAACATTTCCATGTCTTCT 705 consensus_10546#2 AAGAGGTCAAGGACCGGGCAGCAACAAAGTGATCCATATAATGAAGTCTTCTCTGGTGCT 562 * ** * ** * * **** ** ** ** * * * * * * consensus_10546#0 AAGGGAAGACCATGTGGTCAT----CAACATT---TGGGTAACATACGTACCGTTGGAT- 1727 consensus_10546#1 CAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTA 765 consensus_10546#2 GAGAACATAACAAG-----ATA---CAGCTATAAGGAGCTGGCTAAGGCAACACTGAATT 614 * * * * * ** * * * * * * consensus_10546#0 ---------GACAAAACCCAAAGTTATA--------------GCAAGATTTGTCCCTGAA 1764 consensus_10546#1 TTTCCACAAGAAGAACACCAAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGA 825 consensus_10546#2 TT-------GACCAATCCAATAAGATTGGTGA---GGGAGGTTTTGGACCTGTATACAAA 664 ** ** * * * * * *** * consensus_10546#0 TAACACAT--GGGAATCATGACATTT-GTGGTACTGTGATGCATACAATGGTAGCTAA-G 1820 consensus_10546#1 TGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATG 885 consensus_10546#2 GGAACTCTCAAGGATGGAACAGATGTTGCTGTAAAGTTGCTGTCGTTACAATCTAGACAA 724 * *** * * * * * * consensus_10546#0 CATG-GAAGACTTGCCCTAGAGTGAGCTAAT-TTAGAACTCTT------AACATCATCAT 1872 consensus_10546#1 CATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTAT 945 consensus_10546#2 GGTGTGAAGG--AGTTCCTTAATGAACTTAT---GGCAATCTCTGAC------------- 766 * **** * * * * * * * * * consensus_10546#0 T--GAACTCTTAAAATAAAAATTAAGTTGCAGTAACAAGCCAACAGCTGTACAACATT-T 1929 consensus_10546#1 CAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCAT 1005 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 AGCCTCAAACTGAAAAGTTCGGTACATC-----ATAT-CTTGTCCAAG------AAGCGA 1977 consensus_10546#1 GGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGA 1065 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GATGCTTGT-ATTTCAAATAGAA---AAAAGCATACCTTCTCAAGAAGGATCT----GGT 2029 consensus_10546#1 ACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGAT 1125 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 CTTCGTAGGGCA--ATTTTGTGTCAGTGTTGCATCTTCCA-CTAACTATTTCCACAAGAA 2086 consensus_10546#1 AATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGAT 1185 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GAACACCAAAGCTGTAAACATCTGACTTGCGT-------GTCACTTGTCCTCGGATGGCA 2139 consensus_10546#1 TCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAAGGAACTCCTTCACACCTTGTC 1245 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 TATTCAGGAGCCA-AGTAACCTCTGAAAGCAAAACCACAATATAAAGAAAGGAAGAGAAG 2198 consensus_10546#1 TAGATTGTAACGACAGCAACTTC--ACAGCAACATC-TGTTCCATCCTTGAGAGTTCCCT 1302 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 GGTATAGCAGGGTGTACATATAGTTCTTAAGTTATCACAGACTAGTTTATTTTTTTACTC 2258 consensus_10546#1 TGTATA-CAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTT 1361 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 CATTTCATTTGCACTCTTTATTTTGATACACAGCAGGTTTCAAGACATATGGAGAGCAAA 2318 consensus_10546#1 GCCTTAGCCAGCTCCTTATAGCTGTAT-CTTGTTATGTTCTCAGCACCAGAGAAGACTTC 1420 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ATCCGATGAC-------------------------------------------------- 2328 consensus_10546#1 ATTATATGGATCACTTTGTTGCTGCCCGGTCCTTGACCTCTTGAAAAAGAGAGAAAAACA 1480 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ------------------------------------------------------------ consensus_10546#1 ACTCATCACTGAGATGTTTCAAGCTATGGAAAACACAGCTGTGTTGTGCCTGGCTTAATT 1540 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ------------------------------------------------------------ consensus_10546#1 GAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATC 1600 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ------------------------------------------------------------ consensus_10546#1 CTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGA 1660 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ------------------------------------------------------------ consensus_10546#1 AGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGC 1720 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ------------------------------------------------------------ consensus_10546#1 GGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCG 1780 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ------------------------------------------------------------ consensus_10546#1 AAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAGGAGGAGTTTCTA 1840 consensus_10546#2 ------------------------------------------------------------ consensus_10546#0 ----------------- consensus_10546#1 CTCCTCAGCCATGTCAG 1857 consensus_10546#2 ----------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||